From Emodnet Chemical Pilot to Emodnet Chemistry 2 Matteo Vinci and Alessandra Giorgetti, – OGS – NODC group, OCE - MODEG meeting, Copenhagen, 4 and 5.

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Presentation transcript:

From Emodnet Chemical Pilot to Emodnet Chemistry 2 Matteo Vinci and Alessandra Giorgetti, – OGS – NODC group, OCE - MODEG meeting, Copenhagen, 4 and 5 July 2013

The Chemistry Pilot : where NORTH SEA BLACK SEA MEDITERRANEAN SEA Regional Leaders: North Sea – NERI Black Sea– MHI Med Sea – HCMR

The Chemistry Pilot : what -parameters choice based on MSFD requirements, from 8 groups of compounds, in 3 matrices( water, biota, sediment),  17 selected parameters for product generation.

The Chemistry Pilot : How Based on SeaDataNet : An efficient distributed Marine Data Management Infrastructure for large and diverse sets of data deriving from in situ and remote observation of the seas and oceans. Actively involved in standards implementation following INSPIRE; An european de-facto standard with: 44 partners and 14 subcontractors from 35 countries european and not.

The Chemistry Pilot : How Principle of “ADOPTED AND ADAPTED” SDN Standards for metadata,data and products : for metadata (xml ISO  ISO 19139) CDI; for common terms Standard Vocabs (P021,P011,P061...); for background data exchange ASCII format ODV, SDN Infrastructure: Service to access data with data policy management  CDI mechanism, Service for users registrations  SDN Security Services, Service for discovery, visualization and downloading of products  SDN Products viewing services SDN Softwares: MIKADO → metadata mapping and xml generator NEMO → data formatting tool DIVA software → gridded data products and error maps as NetCDF files, ODV software → for “time series” products generation and QC

The Pilot Project Work Packages: WP1 - Project Coordination WP2 – Data collection and metadata compilation WP3 – QC/QA and data products WP4 – Technical development and operation WP5 – Analysis and Evaluation Partners: 25 partners; OGS coordination; Contract had a duration of 3 years from June 2009 to June 2012;

The Pilot Project WP2 Data collection and metadata compilation : All partners collected and updated : Data → ODV file → managed by Reg. Leaders at level of the 3 Regional data pools → (de-centralized) Metadata → CDI entries → Maris (centralized) All partners gave access to: metadata (unrestricted); and data according to the data policy as agreed with the data ORIGINATOR. NORTH SEA BLACK SEA MEDITERRANEAN SEA

The Pilot Project: challenge to face along the path from DATA to PRODUCTS Data complexity: from 8 groups of compounds; 3 matrices (sediment, water column and biota); 17 selected parameters for products generation; Heterogeneity: Of the sampling/data distribution (coastal points time series Vs homogenous sampling at basins level); Of measurement methods (instrument, method, target species, target basis, grain sizes).

The Pilot Project WP3 QC/QA and data products: The analysis of available data; The Expert workshop with contribution of the Marine Conventions; Highlighted 2 main substets from the available data : Expert workshop, summary of decisions to highlight data features with Products generation: -Standard Diva Interpolated maps produced for parameters with homogeneous and suitable data coverage, measured on basin scale; -“Time series plots”. Showing station maps linked to plots of measured time series. This for not homogeneous data as: coastal points repeated in time, datasets with fragmented coverage. Not homogeneous ditribution In time and space (basins) Homogeneous ditribution In time and space (basins)

Data products DIVA interpolated maps: – Focus on nutrients in the water column based on data availability; – Focus on annual and seasonal scale based on data availability; – Interpolated maps generated by Diva software; – Metadata file generated by DivadoXML script;

DIVA interpolated maps Ocean Browser (Gher group) * Interpolated fields loaded as WMS layers * * * * *

Data products Time Series plots: -Focus on the parameters with fragmented coverage (spatial/temporal); -suggested use of ODV software for plots generation; -ratio of 1plot:1station:1parameter:1depth; -metadata collected in a INDEX file ( assimilation.net/mediawiki/index.php/OceanBrowser#Observation_i ndex_files ) Recommendations: -to avoid plots for stations with less than 3 points; -to avoid linkage lines between single points; -to provide TS plots in vector format (as SVG);

Time Series plots Ocean Browser (Gher group) * products loaded as WMS layers *

The Pilot Project WP5 Analysis and Evaluation : 2 online questionnaire

Lessons Learned/Open issues from Pilot QC for «exotic parameters» (eg:contaminants...) no spikes are detect for them, they are events. At the moment not enough data to calculate regional ranges. Lack of «Under detection limit» information; Technical development/usersfriendliness: Finalization of products metadata catalogue to load and search Maps metadata /Time series plots metadata; Improvements of web interfaces search criteria as highlighted by SDN2 userpanel and Chemistry Lot users; Improvement of handling of Chemical Parameters metadata with Common Vocabs (transparency/flexibility); Need of group of experts for the data-products periodic validation for each regions + workshop.

The New Phase (MARE/2012/10) Enlarged partnership: 32 partners + 14 sub-contractors = total of 46 participants (about twice!) coordinated by OGS; Official starting? Kick-off meeting: Trieste, 3rd -5th June 2013;  New parameters: chlorophyll, silicates, partial pressure of dissolved gasses, plastics, acidity;  3 matrices: water column, biota, sediment;  The portal should cover all European waters;  New products: coastal visualization + a proposal for assessment tool;  Specific focus on Coastal Data.

The New Phase The portal should cover all European waters Note: This map is derived from the EU Tender document but lacks the Norwegian sea The parameters:

The New Phase:WPs WP0- Project Management WP1- Data collection and metadata compilation in sea regions WP2- Data Products generation in sea regions WP3 - QA/QC - Validation - MSFD interaction WP4- Portal development and operation WP5 - Analyses and Recommendations Collaboration with other projects/activities: SDN  since the pilot phase; Emodnet Lots  ongoing; ODIP  for this second phase;...and open dialogue with Marine Conventions.

Regional level: Data harvesting (WP1) and products generation (WP2) will be always organized at Regional level. This time 5 sea regions have been defined as: Greater North Sea (including Norwegian Sea and Celtic Sea); Atlantic Sea (including Atlantic Coast and Macaronesia); Baltic Sea; Black Sea; Mediterranean Sea.

Ongoing activity to face the Pilot open issues: QC for exotic parameters: Open dialogue with MSFD requirements/guidelines; Data harvesting will provide new data for regional ranges; Open dialogue with Marine Conventions experts; Efforts to collect «detection limits» for an inventory in the different areas; A technical meeting under definition ( September?) for: Finalization of products metadata catalogue; Improvement of web interfaces search criteria ; Improvement of handling of Chemical Parameters ; the data-products periodic validation: Regional experts group  already searching for candidates; QC workshop to be organized at month 12.

What is expected from the activity within 2014 Sea Regions definition (November 2013?); Updated datasets for the 5 Regions; First release of updated classic products (interpolated maps ans TS); A test case for an assessment tool; At M12 first validation workshop with experts from: Marine Conventions, MSFD and WG-DIKE.

Thanks! Questions?