VI-SEEM Data Repository

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Presentation transcript:

VI-SEEM Data Repository Vladimir Slavnić Research Assistant Institute of Physics Belgrade The VI-SEEM project initiative is co-funded by the European Commission under the H2020 Research Infrastructures contract no. 675121

Agenda VI-SEEM Repository Underlying Technology Benefits of VI-SEEM Repo Features Types of data Information Model The DSPACE (VI-SEEM Repo) Architecture Repository Organization Live Demo VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 2

VI-SEEM Repository The VI-SEEM Repository provides long term data preservation, suitable for data set sharing https://repo.vi-seem.eu/ Use cases To store curated data sets for long term preservation To share those datasets with selected collaborators or open them up to whole communities, via web interface To make such data sets searchable by means of associating meta data and then harvesting them Enables scientific communities to capture and describe digital works using a custom submission workflow module VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 3

Underlying Technology Based on DSpace DSpace is a platform that allows you to capture items in any format – in text, video, audio, and data. It distributes it over the web. It indexes your work, so users can search and retrieve your items. It preserves your digital work over the long term. Developed by the MIT Libraries with support from the HP-MIT Alliance A platform to build an Institutional Repository VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 4

Benefits of VI-SEEM Repo Some example benefits: Getting your research results out quickly, to a worldwide audience Reaching a worldwide audience through exposure to search engines such as Google Storing reusable teaching materials that you can use with course management systems Archiving and distributing material you would currently put on your personal website Storing examples of students’ projects (with the students’ permission) Showcasing students’ theses (again with permission) Keeping track of your own publications/bibliography Having a persistent network identifier for your work, that never changes or breaks No more page charges for images. You can point to your images’ persistent identifiers in your published articles. VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 5

Features User Interface Workflow Open Archives Initiative (OAI) Web based, for submission, end-user and System Administrators Search and retrieval of items by browsing or searching the metadata Workflow Enables differing submission workflows for communities Models "e-people" who have "roles" in the workflow of a particular Community in the context of a given collection Open Archives Initiative (OAI) OAI-PMH 2.0 Compatible and uses used the OCLC OAICat -> For integration with VI-SEEM Data Search platform (to be available soon) Persistent Identifiers (Handles) Implements CNRI handles as the persistent identifier associated with each item Soon to be integrated with the VI-SEEM PID service Access Control Allows contributors to limit access to items in the repository, at both the collection and the individual item level Integrated with the VI-SEEM Login Service Metadata Schema Utilises Qualified Dublin Core VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 6

Types of data in the VI-SEEM Repository Articles Preprints, e-prints Technical Reports Working Papers Conference Papers E-theses Audio/Video Lecture notes, Visualizations, simulations Datasets in various formats Experimental Simulation Input Output Images Visual, scientific Teaching material Digitized library collections VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 7

Information Model Communities Collections (in communities) Departments, Labs, Research Centers, Schools… Collections (in communities) Distinct groupings of like items Items (in collections) Logical content objects Receive persistent identifier Bitstreams (in items) Individual files Receive preservation treatment Versioning- Item “versions” can be All instances of a work in different formats E.g. the XML, PDF, and PostScript versions All editions of a work over time Metadata lists all available versions of items VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 8

The DSpace (VI-SEEM Repo) Architecture VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 9

Repository Organization Each Dspace service is comprised of Communities – the highest level of the Dspace content hierarchy Communities may be: Departments Labs Research Centres Schools Each community contains descriptive metadata about itself and the collections contained within it VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 10

Collections Each community in turn have collections which contain items or files Collections can belong to a single community or multiple communities (collaboration between communities may result in a shared collection) As with communities, each collection contains descriptive metadata about itself and the items contained within it VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 11

Example Structures Structures may be based around organizational units: Structures are hierarchical: Community Collection Items Life Sciences MD Data Climate Future Climate Modelling Digital Cultural Heritage Social Sciences Library Community Sub Community Collection Item Life Sciences Molecular Dynamics Cancer Related Data .... VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 12

Live Demo VI-SEEM Life Sciences Regional Training – Belgrade, Serbia, 19-21 Oct 2016 13

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