1. Cellular Biology

2. Big Idea 4: Biological systems interact, and these systems and their interactions possess complex properties.
EU 4.A: Interactions within biological systems lead to complex properties. EU 4.B: Competition and cooperation are important aspects of biological systems. EU 4.C: Naturally occurring diversity among and between components within biological systems affects interactions with the environment.

3. EK 4.A.2: The structure and function of subcellular components, and their interactions, provide essential cellular processes.
Ribosomes
Endoplasmic Reticulum (see 2.b.3)
Golgi Complex (see 2.b.3
Mitochondria (see 2.b.3)
Lysosomes
Vacuoles
Peroxisomes
Nucleus (see 2.b.3)
Chloroplasts (see 2.b.3)
Cell Wall
Cytoskeleton
ECM
Intercellular Junctions
Stop

4. Ribosomes Nonmembrane, universal structures
Comprised of two interacting parts: ribosomal RNA and protein.
Site of protein synthesis
Where the translation of the genetic instructions yields specific polypeptides.

5. Lysosomes Membrane-enclosed sacs produced by Golgi apparatus Functions
Intracellular digestion
Recycling of a cell’s organic materials
Programmed cell death (apoptosis).
Contain hydrolytic digestive enzymes.
Enzymes work best at low pH (5)
Membrane pumps in H+
Isolates digestion.
Macrophages use lysosomes to digest bacteria.

6. Lysosomes Autophagy When lysosomes digest parts of cells
Important during development (e.g., tadpole tail absorption, degeneration of webbing between human fingers).
Missing or inactive lysosomal enzymes cause serious childhood diseases.
Pompe’s disease- missing carbohydrase, glycogen accumulates, damages liver.
Tay-Sachs disease- missing lipase, lipids accumulate in brain.

7. Vacuoles
A membrane-bound sac that plays roles in intracellular digestion and the release of cellular waste products.
In plants, a large central vacuole serves many functions
Storage of pigments or poisonous substances
Cell growth and support
Alllows for a large surface area to volume ratio.
Membrane is called the tonoplast
Types include: food, digestive, and in some protists, water-regulating contractile vacuoles.

8. Peroxisomes Abundant in liver
Not from endomembrane. From cytosol proteins and lipids.
Transfers hydrogen (from substrates) to oxygen forming hydrogen peroxide(H2O2).
Also occur in germinating seeds (glyoxysomes) where they convert oils into sugars

9. Cell Wall
Mainly cellulose fibers in a matrix of polysaccharides and proteins.
Protect plant cells
Prevent water loss.
Maintain cell shape

10. Cytoskeleton Mechanical support and helps maintain shape.
Elements can disassemble and reassemble in life of a cell.
Three Types of Fibers
Microtubules
Microfilaments
Intermediate filaments

11. Microtubules Hollow cylinders 25 nm in diameter
Composed of -tubulin and -tubulin dimers
Functions
Help maintain shape of cells.
Act as tracks along which organelles move.
Motor molecules kinesin and dynein are associated with microtubules.
Motor molecules change shape with ATP.
Move chromosomes.
Make up centrioles in animal cells.

12. Microtubules Cilia and Flagella
Cilia are short, usually numerous hairlike projections.
Flagella are longer, usually fewer, whip-like projections.
Composed of a pattern of microtubules.

13. Microfilaments
Two chains of actin protein monomers twisted to form a helix.
7 nm in diameter
Functions
Forms a dense complex web just under the plasma membrane.
Form microvilli of intestinal cells
In plant cells, they form tracts along which chloroplasts circulate.
Interaction with myosin
For muscle contraction
For pinching off cells during cell division
For amoeboid movement.

14. Intermediate Filaments
Rope-like assemblies of fibrous keratin
8-12 nm in diameter
More permanent than microtubules and microfilaments.
Functions
Support nuclear envelope and plasma membrane
Form cell-to-cell junctions.

15. Extracellular Matrix (ECM)
Mesh of macromolecules outside plasma membrane of animal cells.
Composed mainly of glycoproteins (collagen)- ½ of total protein in vertebrates.
Provides support and anchorage for cells.

16. Intercellular Junctions
Plants have Plasmodesmata
Animal Cells
Tight Junctions- Block transport of substances between cells.
Desmosomes- Rivet cells together, but still permit transport of substances.
Gap Junctions- Two connecting protein rings in adjacent cells.

17. Endoplasmic Reticulum
Continuous with outer membrane of the nuclear envelope.
Most extensive portion of endomembrane system.
Rough endoplasmic reticulum
Serves as mechanical support
Provides site-specific protein synthesis with membrane-bound ribosomes
Intracellular transport of protein.
Makes secretory proteins (mainly glycoprotiens)
Packages proteins as transport vesicles.
Makes new membranes.

18. Endoplasmic Reticulum
Smooth ER (no ribosomes)
Synthesizes lipids, phospholipids, and steroids
In Liver
Converts glycogen to glucose to regulate blood sugar.
Detoxifies drugs and poisons (adds hydroxyl groups making them water soluble).
Stores Ca+ in muscle

19. Golgi Complex Membrane-bound structure
Consists of a series of flattened membrane sacs (cisternae).
Synthesis and packaging of materials (small molecules) for transport (in vesicles)
Receives protein-filled vesicles that bud from the ER at cis face.
Proteins are modified and repackaged as new vesicles.
Vesicles leave from trans face.
At plasma membrane, they discharge their contents as secretions.
Produces lysosomes.

20. Mitochondria Have a double membrane that allows compartmentalization
Inner membrane is highly convoluted, forming folds called cristae.
Cristae contain enzymes important to ATP production
Cristae also increase the surface area for ATP production
Sites of cellular respiration.
Contain ribosomes and their own DNA
Specialize in energy capture and transformation.

21. Nucleus
Nuclear envelope: a double membrane that separates nucleoplasm from cytoplasm.
Stores genetic information determining structure/function of cells
Site where nucleic acids are synthesized
Chromatin: Fine strands of DNA and protein (histones)
Chromosomes: rod-like structures formed during cell division from coiled or folded chromatin.(46 in humans)

22. Nucleus Nucleoplasm Semifluid medium of nucleus
Has a different pH from cytosol
Nucleolus: sites where rRNA joins proteins to form ribosomes.
Nuclear pores (100 nm)- permit passage of certain mRNA and ribosomes

23. Chloroplasts
Specialized organelles found in algae and higher plants that capture energy through photosynthesis.
Capture the energy available in sunlight and convert it to chemical bond energy via photosynthesis.
Contain Chlorophylls
Responsible for the green color of a plant
The key light-trapping molecules in photosynthesis.
There are several types of chlorophyll, but the predominant form in plants is chlorophyll a.

24. Chloroplasts
Have a double outer membrane that creates a compartmentalized structure
Contain membrane-bound structures called thylakoids.
Thylakoids are organized in stacks, called grana
Energy-capturing reactions
Produce ATP and NADPH
Which fuel carbon-fixing reactions in the Calvin-Benson cycle
Carbon fixation occurs in the stroma
Where molecules of CO2 are converted to carbohydrates.

25. Chloroplasts Chloroplasts are a type of plastid.
Amyloplasts store starch (amylose, amylopectin)
Chromoplasts, which contain red and orange pigments.
Only plants, algae, and cyanobacteria carry on photosynthesis.
There are no chloroplasts in cyanobacteria; chlorophyll is bound to cytoplasmic thylakoids.

26. Cell Theory Cell is the smallest unit of life
Robert Hook (English) st to observe/name cells (cork,dead)
Anton Van Leeuwenhoek (Dutch) st to observe live microorganisms
All Organisms are composed of Cells
Matthias Schleiden (botanist), 1838
Theodor Schwann (zoologist), 1839
Cells come from cells
Rudolf Virchow
Physician, 1855