NA-MIC Kit 6-22-2010.

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Presentation transcript:

NA-MIC Kit 6-22-2010

Acknowledgments F. Jolesz, R. Kikinis, C. Tempany, P. Black, S. Wells, CF. Westin, M. Halle, N. Hata, T. Kapur, A.Tannenbaum, M. Shenton, E. Grimson, P.Golland, S. Pieper, W.Schroeder, J. Miller, N. Aucoin, K. Hayes, S. Barre, W. Plesniak, and many more….

NA-MIC Kit The NA-MIC Kit is a Collection of Software and Methodologies for Medical Image Computing Most components of the NA-MIC kit predate NA-MIC (National Alliance for Medical Image Computing)

NA-MIC Kit Packaging of: Applications Algorithms (toolkits) Methodologies

NA-MIC Kit Components End User Application 3D Slicer Image Analysis, Visualization, and GUI libraries ITK, VTK, KWWidgets Large Scale Data Processing Tools Batchmake, BIRN GRID tools Software Engineering Tools CMake, Dart, CTest, CPack http://www.na-mic.org/Wiki/index.php/SoftwareInventory Provided by Pieper, Kikinis

ITK Slicer 3.6 uses ITK 3.18 (Slicer 3.4 used ITK 3.10) Label images (run length encoding, shape and intensity opening filters) Physical coordinates issues resolved Streaming IO additions Colormaps FFT based recon Fractal analysis Multicomponent level sets Fast rounding numeric traits Addition of classes for managing internationalization of strings Updated the version of NrrdIO Recently added classes were included in the Wrapping Improved support for Symmetric Tensor operations ARRA funding for ITK v4 – Design meeting 6-27-2010 ARRA funding for A2D2 Provided by Pieper, Kikinis

VTK Slicer 3.6 uses a patched VTK 5.6 (Slicer 3.4 used VTK 5.2) GPU based volume rendering GPU based LIC Line and bar chart improvements Freetype upgrade VTK Blog / VTK Journal VTK has moved to using git Provided by Pieper, Kikinis

KWWidgets No major changes Maintenance mode as Slicer transitions to Qt Provided by Pieper, Kikinis

Grid Wizard Enterprise Version 0.7.3 Record Set Explorer Provided by Pieper, Kikinis

CMake Slicer 3.6 use CMake 2.8 (Slicer 3.4 used CMake 2.6) http://www.cmake.org/files/v2.8/CMakeChangeLog-2.8.0 Lots of bug fixes Provided by Pieper, Kikinis

CDash Current release 1.6.4 Support for persistent login Better database compression New graphs and reports Improved coverage visualization Better CTest communication Expected submission time based on historic average Faster load of the main dashboard page Improved navigation links Remote build management (beta) Provided by Pieper, Kikinis