1. Core 2 Progress Day 1 Salt Lake City
Bill Lorensen

3. Core 2: Overview GE Kitware UCLA UCSD Isomics Software Engineering
1. Software Architecture
Kitware
2. Software Process
UCLA
3. Software Quality
1. Cross-platform Build
1. Graphical programming interfaces
2. Coordinate pre-compiled tools
2. Cross-platform Distribution
3. Data format interpreters
3. Cross-language API’s
Software Engineering
Software Engineering Tools
UCSD
Software Quality
Isomics
1. Grid Middleware
Software Integration
1. DBP Applications
2. Data Grid
Data Access Tools
2. Application Methodology
3. Data Mediation
Distributed Computing
3. Application Quality Assurance
Applications

4. DTI Workshop Day 0

5. GE Research
Next generation software quality system, Dart 2. Three face-to-face meetings were held with Kitware to discuss requirements and review the design. A first implementation is now available (Blezek, Miller)
Identified two areas that require immediate engineering attention.
Diffusion Tensor Imaging requirements: Hosted a T-CON to get a high level look at DTI issues and organized DTI Workshop.
Coordinate systems for NA-MIC: Mailing lists discussions on requirements for coordinate systems for the NA-MIC kit. Created a strawman solution for itk.
Started discussions with NIH concerning software process for NCBC centers

6. GE Research Plans DTI Engineering (with Kitware) Coordinate systems
Refine requirements
First gen implementations
Coordinate systems
Initial itk integration
Dart 2
Establish NA-MIC kit dashboards

7. Kitware
With GE Research, worked on establishing requirements for the next generation DART software testing server. Participated in several design reviews of the ongoing DART implementation.
Extended the client side testing including improvements to CTest.
Established the testing infrastructure (setting up dashboards, etc.) in conjunction with our ongoing Core 4 efforts.
Improved performance of ITK iterators in response to feedback received during dissemination workshops.
Participated in Core 2 DTI discussion (prototype ITK tensor data).

8. UCSD Dissemination Infrastructure Data Sharing
Hosted NAMIC dissemination event (February 17-18).
Taught Data Grid course at UCSD dissemination event.
Instructions available for deploying a "tunneled" SRB server.
Infrastructure
Researched, tested and deployed a newly configured SRB server for NAMIC that allows for the tunneling of all SRB commands via SSH. A server co-located at BWH will be discussed at the AHM.
Data Sharing
Hosting NAMIC data on data grid accessible to all NAMIC participants.
Providing data grid and Portal support to all NAMIC participants.

9. Sharing data using BIRN
Data Management
Data Access Control & Auditing
Metadata Search
The BIRN Portal and Data Grid provides secure and audited access to NAMIC data from Core 3 sites with a Single Login from any Internet capable location.

10. UCLA Built NAMIC software installation pipelines
Built integrated visualization component
Attended dissemination workshops in Boston and UCSD

11. LONI Pipeline Roadmap 6/2005 12/2005 6/2006 Beta to be released
Fault tolerance
Overlay grid implementation
6/2006
ITK/VTK integration
SCIRun integration
Provenance
Data validation
Information recovery

12. Isomics Update vtkITK-Based Slicer Modules for Major Task Types
I/O: GenericReaders (Yarmarkovich)
Filtering: ITKFilters (Estepar)
Segmentation: ConfidenceConnected (Pieper)
Registration: RigidIntensityRegistration (Timoner/Pieper)
Visualization: SpatialObjectVisualizers (Jomier)

13. Isomics Plans
Work Closely with Core 3.1 on Nonlinear Registration/Resampling
Poll Developer Community on Application Framework Needs
Plan/Work to Migrate Functionality into ITK
RAS, Scene Management, fMRI, DTI…