DNA-based early detection and diagnostics of alien invasive forest pathogens and tracing of their introduction pathways into northern Europe Norwegian-Estonian.

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Presentation transcript:

DNA-based early detection and diagnostics of alien invasive forest pathogens and tracing of their introduction pathways into northern Europe Norwegian-Estonian Research Cooperation Programme Rein Drenkhan1, Kalev Adamson1, Ari Hietala2 1Estonian University of Life Sciences rein.drenkhan@emu.ee 2Norwegian Institute of Bioeconomy Research ari.hietala@nibio.no September 21–22, 2017, Laulasmaa, Estonia

Main objectives and hypotheses of the project Aims of this three-year project (2014-2016), financed by the Norwegian-Estonian Research Cooperation Programme: Develop/implement DNA-based molecular assays for rapid detection of invasive pathogens associated with seeds, seedlings, wood and timber products that are imported to our countries. establish the introduction pathways of two invasive pathogens (Dothistroma needle blight of conifers and ash dieback) to Estonia and Norway. explore the impact of the targeted invasive pathogens on microbial biodiversity, normally associated with tree foliage.

Why was the project needed? Invasive alien species (IAS) are recognized as one of the largest threats to the world’s biodiversity (e.g. ash dieback in Europe). The annual economic losses due to IAS within Europe alone have been estimated annually as 12 billion euros. Once an introduced species has established in an area, it is very difficult to eliminate it. With growing import of exotic plants, pulpwood and timber products, there is an urgent need to develop diagnostic screening methods.

Dothistroma needle blight (caused by Dothistroma seprosporum) is dangerous to exotic conifers, like Pinus mugo Ash dieback (caused by Hymenoscyphus fraxineus) is reason for massive death of Common ash (Fraxinus excelsior) all over Europe

The most important results I One project objective was to design and implement DNA-based diagnostic methods that allow their early detection. 113 imported biological samples (plants and wood) were analysed and 5 % of these samples carried a pathogen that is not native to northern Europe. This demonstrates the risks of plant trade, i.e. pathogens may also arrive with plants that are unknown to host a specific pathogen. Eight new DNA primers and probes for detection of invasive pathogens were developed and tested.

Results II A second project objective was to identify the source populations of two alien pathogens in Europe. We found no support to the hypothesis that the targeted pathogens in north Europe (H. fraxineus; D. septosporum) could originate directly from Far East Asia. In contrast, D. septosporum showed surprisingly gene flow of opposite direction, i.e. from northern Europe to Far East Asia. The clear discrimination between European and Asian populations of H. fraxineus is in contrast to the working hypothesis of the scientific community.

Results III Additional results include discovery of new locations for the quarantine pine needle pathogen, Lecanosticta acicola, and records of new host species for the ash dieback pathogen H. fraxineus and the pine pathogen Diplodia sapinea. The project also supported a collaborative work of 66 researchers from 33 countries: we detailed records of pine disease (Dothistroma needle blight) from 65 countries all over the World and collated them to the international Dothistroma needle blight geo-database (http://arcgis.mendelu.cz/monitoring/).

DNB occurs in 76 countries and the oldest record was in Denmark in 1880 1910 1880 1914 1914 1907 See more in paper: Drenkhan, R. et al. 2016. Global geographic distribution and host range of Dothistroma: a comprehensive review. Forest Pathology 46: 408-442. Also see interactive map: http://arcgis.mendelu.cz/monitoring/

Outcome of the project The project demonstrates the risks involved in international plant trade, and emphasises the need for increased political and public awareness to meet this threat. The results clarifies global spread and practical plant quarantine regulations for some invasive species! The project dissemination: so far 8 scientific papers, 2 of which were joint publications with Norwegian partner. Additional joint manuscripts are in preparation. A total of 26 presentations to national and international audiences.

Thank you for all participants! Project Promoter, Estonian University of Life Sciences, Institute of Forestry and Rural Engineering, Department of Silviculture. Dr. Rein Drenkhan, project leader, Dr. Märt Hanso, senior scientist, Dr. Kalev Adamson, PhD student, Dr. Tiia Drenkhan, PhD student, Mrs. Katrin Jürimaa, laboratory assistant, Tiit Maaten, Martin Tee, Taavi Riit and others PhD and master students. Donor project partner, Norwegian Institute of Bioeconomy Research Dr. Ari Hietala, leader of Norwegian group, Dr. Halvor Solheim, professor of Forest pathology, Dr. Adam Vivian-Smith, molecular biologist, Dr. Hugh Cross , molecular biologist, Mrs. Inger Heldal, an engineer. Project homepage: http://mi.emu.ee/struktuur/metsakasvatuse-ja-metsaokoloogia- oppetool/metsakasvatus/mimk-projektid/project-emp-162/