Mapping EP4.

Slides:



Advertisements
Similar presentations
Teaching Fiducial Marks
Advertisements

Tutorial 3 Refractor assignment, Analysis, Modeling and Statics
Working with Profiles in IX1D v 3 – A Tutorial © 2006 Interpex Limited All rights reserved Version 1.0.
Introduction to Operation of the XL-30 Scanning Electron Microscope Tutorial # 1 Overview of XL-30 Microscope Control Program.
Operating the Harmonizer
Windows XP Basics OVERVIEW Next.
Getting results. Session summary and analysis The PRS software provides a set of tools to review and analyze classroom sessions With these tools, you.
Sketchify Tutorial Graphics and Animation in Sketchify sketchify.sf.net Željko Obrenović
1 QED In Vivo USB Input Output Box configuration This tutorial contains a number of instructions embedded in a great deal of explanation. Procedures that.
Etomo introduction A) Start “cygwin-bash” on desktop The command prompt window opens up B) Enter “etomo” and hit enter This quick guide will show how to.
Software upgrade, Version 3.6X Tips and Tricks In the course of continuous further product development, this software has been developed further regarding.
Copyright ⓒ VATECH Global Co., Ltd. All rights reserved EasyStartGuide Please refer to the included User Manual for more detailed functions on EzDent-i.
Lesson 2: Compositions and Animations CMM204 – Digital Media Effects.
Color Correct and Remove Keystoning A minimalist approach to photographing your art By Paul Marley.
0 eCPIC Admin Training: Custom Calculated Fields These training materials are owned by the Federal Government. They can be used or modified only by FESCOM.
- 1 - LSM 510 META AIM Carl Zeiss - PMLSM 510 META EF-Guided Tour April 2002 Guided tour through:  Configuration  Defining spectral range  Scan control.
Welcome to Photoshop 5 Tutorials Welcome to Photoshop 5 Tutorials.
Calibration & Measurements. Calibrating the System Before we can make any measurements we need to calibrate our imaging system to create real world numbers.
Microscope Control Configuration This section of the QED manual will describe how to configure you Configure and Control your automated microscope. Mac.
PowerPoint Basics Tutorial 3: Graphics In this tutorial we’ll be looking at graphics, and the various types of illustrations that can be included in a.
- 1 - LSM 510 META AIM Carl Zeiss - PMLSM 510 META EF-Guided Tour April 2002 Guided tour through:  Configuration  Defining spectral range  Scan control.
NA-MIC National Alliance for Medical Image Computing Slicer3 Tutorial: Registration Library Case 15 AC-PC Alignment Dominik Meier, Ron.
FOCUS II Demonstration Simply click the mouse to advance through the presentation. Or; Tap the right arrow key on the keyboard to advance through the slides.
Chapter 3 Device Monitor Screen Otasuke GP-EX! Chapter 3 Device Monitor Screen Chapter 3 Device Monitor Screen.
ANIMATIONS. max remembers… state of model at different points in time.
Photoshop Actions Lights, Camera, Actions in Photoshop.
 UV mapping is a process of applying textures to an object by hand  Figure: Blender model textured through a UV map.
User Manual for Tmaptool – T1 ρ processing tool Guruprasad Krishnamoorthy Chetana Bayas Gargi Pednekar.
FlowArm PLTW Programming
JMARS THEMIS Targeting Software An Overview for Mars Student Scientists Revised: 19 September 2006.
1 Setting Laser Power and PMT Gain Begin with laser power at 20% Set PMT gain to 6.00.
SalsaJ (Such a Lovely Software for Astronomy) Practical Session.
Animations & Multimedia LESSON 9 #2.09 USING ANIMATION AND MULTIMEDIA.
Introduction to Microsoft publisher
Acer Download Tool EMEA Customer Service 02/13/2012.
ELPA21 Data Entry Interface (DEI) Overview
Creating Oracle Business Intelligence Interactive Dashboards
You will get a menu as displayed on screen.
Image Geo-Referencing in ArcGIS
Introduction to Microsoft publisher
A Tutorial on How to Turn PowerPoint Presentations into Slideshows
ELPA21 Data Entry Interface (DEI) Overview
FlowArm PLTW Programming
Standard Operation Procedure
Using PowerPoint to Present Research Results
Software Equipment Survey
Database Applications – Microsoft Access
Data Entry Interface (DEI) Overview
Managing Rosters Screener Training Module Module 5
Introduction to Database Programs
[Update PPE for Worker] Worker Register
Using the QGIS Layout Manager to create
Timelapse with the Veho VMS-001 Microscope
DPP Shell Adjustments Short Procedure
Spatial Data Entry via Digitizing
Welcome to the MaxTRAQ Tour
Welcome to the MaxTRAQ Tour
Introduction to Database Programs
Two samples of size 10 are taken from a dissolution apparatus.
Harvard Medical School Neurobiology Imaging Facility
GeoGebra 101 Introducing J. Carter GeoGebra 101.
VISUAL COMMUNICATION USING ADOBE PHOTOSHOP CREATIVE SUITE 5
Harvard Medical School Neurobiology Imaging Facility
Quanta FIB Basic Training xT Microscope Control
Click “Execute” button.
Wiley CPA Exam Review Practice Software 13.0
Maplewood Year End Check List.
Apreo FE-SEM Basic Training xT Microscope Control & Operation
Contact: Clari-Fi Clari-Fi creates large-screen simulations of e-commerce images. These give an indication of the details.
Contact: Clari-Fi Clari-Fi creates large-screen simulations of e-commerce images. These give an indication of the details.
Presentation transcript:

Mapping EP4

Principle

The mapping mode allows to measure delta and psi for each pixcel in the entire image. It combines nulling with highest resolution of live image. In principle a standard nulling is being performed (polarizer and analyzer angle at minimum camera signal, but not as an average for a region of interest, but for each pixel.

Recording a Delta-map analyser polarizer

Recording a Delta-map analyser polarizer

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map analyser

Recording a Delta-map grayscale nulling condition polarizer angle

Recording a Delta-map grayscale polarizer angle polarizer angle

All single frames during the “nulling” are being stored to calculate delta and psi values for each pixel afterwards. Usually the mapping is being combined with the focus scanning to get overall focussed delta and psi maps

focus scanning CCD (detector) Objective analyser polarizer compensator sample CCD (detector) Objective

focus scanning CCD (detector) Objective analyser polarizer compensator sample

focus scanning CCD (detector) Objective analyser polarizer compensator sample

focus scanning + image processing:

After measurement and calculation of delta and psi maps (also possible for multiple wavelengths) those maps are processed and calculated to thickness maps or other refractive index maps.

Step by step procedure

The following procedure is a basic method to show the general procedure of mapping. Later it may be combined with spectroscopy, 4-zone-measurement, xy pattern etc. Refer to “standard operation procedure EP4” to switch on hardware and all software components, select “active session”, adjust z, alignment, select objective and focus scan, and move the sample to an area of interest. Draw one large ROI that covers all interesting areas. start a single measurement. This is a coarse adjust and will ensure that you start mapping already close to the nulling condition.

After the coarse adjust is finished, open the „Map“ tab, set the „scan“ hook to enable focus scanning and select „enable“. When you go back to „measure“ tab, the „Map“ tab will appear green, if enabled. To have an overall focused map you need to activate “scan” to null with scans and repeat the measurement. It is recommended to select “max speed” for the quality to reduce measurement time.

Click “start” to start mapping. Polarizer and Analyzer will rotate stepwise, at each step a focus scan will be performed. This will take about one minute for a one zone delta and psi map.

When measurement is finished, open the “Map” tab to view the recorded maps. Click “export map” to export all recorded maps to DataStudio.

Stack of maps Mapping tool Slider to select maps Go to DataStudio. The maps are shown in DataStudio as a stack. Here you may use the slider to select between the maps and save each map by right click before continuing. Click on Mapping to open mapping window. Stack of maps Mapping tool Slider to select maps

Select interpolation Select delta To Fit your maps you need to define a model first. After defining the model select “delta only” in the model. No other dataset must be enabled at this moment in the model. After preparing the model, go to datastudio and select the delta map and set the hook to “interpolation”. Select interpolation Select delta

You may drag the cursors to set the region of delta values for calculation as shown below Press the button “Fit”. The software automatically calculates the desired thickness map and displays the map in “DataStudio”. Here you may do further processing like 3D view on the calculated map or save it to file. For further details about mapping options please refer to the manual section 5.5. Mapping.