1. Topic Models for Semantic Memory and Information Extraction Mark Steyvers Department of Cognitive Sciences University of California, Irvine Joint work with: Tom Griffiths, UC Berkeley Padhraic Smyth, UC Irvine Dave Newman, UC Irvine Chaitanya Chemudugunta, UC Irvine

2. Human Memory Information Retrieval Finding relevant memories Extracting meaning Finding relevant documents Extracting content

3. Semantic Representations What are suitable representations? How can it be learned from experience?

4. MONEY Structured representations Encoding of propositions Hand coded examples Not inferred from data CASH BILL LOAN MONEY BANK RIVER STREAM Two approaches to semantic representation Semantic networks e.g. Collins & Quillian 1969 Semantic Spaces e.g. Landauer & Dumais, 1997 LOAN CASH RIVER BANK BILL Relatively unstructured representations Can be learned from data

5. Overview I Probabilistic Topic Models II Associative Memory III Episodic Memory IV Applications V Conclusion

6. Probabilistic Topic Models Extract topics from large text collections  unsupervised  Bayesian statistical techniques Topics provide quick summary of content / gist

7. What are topics? A topic represents a probability distribution over words –Related words get high probability in same topic Example topics extracted from psychology grant applications: Probability distribution over words. Most likely words listed at the top

8. Model Input Matrix of counts: number of times words occur in documents Note: –word order is lost: “bag of words” approach –Some function words are deleted: “the”, “a”, “in” documents words 1…1… 16 … 0…0… FOOD … 6190ITALIAN 2012PASTA 3034PIZZA Doc3 …Doc2Doc1

9. Model Assumptions Each topic is a probability distribution over words Each document is modeled as a mixture of topics

10. Generative Model for Documents TOPICS MIXTURE TOPIC WORD... 1. for each document, choose a mixture of topics 2. sample a topic [1..T] from the mixture 3. sample a word from the topic (“LDA” by Blei, Ng, & Jordan, 2002; “pLSI” by Hoffman, 1999; Griffith & Steyvers, 2002 & 2004)

11. Document = mixture of topics Document ----------------------------- -- ----------------------------- ----------------------------- ---- ----------------------------- ----------------------------- ----------------------------- 80% 20% Document ----------------------------- -- ----------------------------- ----------------------------- ---- ----------------------------- ----------------------------- ----------------------------- 100%

12. The Generative Model Conditional probability of word in document: word probability in topic j probability of topic j in document

13. Inverting the generative model Generative model gives procedure to obtain corpus from topics and mixing proportions Inverting the model involves extracting topics and mixing proportions per document from corpus

14. Inverting the generative model Estimate topic assignments –Each occurrence of a word is assigned to one topic [ 1..T ] Large state space –With T=300 topics and 6,000,000 words, the size of the discrete state space is (300) 6,000,000 Need efficient sampling techniques –Markov Chain Monte Carlo (MCMC) with Gibbs sampling

15. INPUT:word-document counts (word order is irrelevant) OUTPUT: topic assignments to each wordP( z i ) likely words in each topicP( w | z ) likely topics in each document (“gist”)P( z | d ) Summary

16. THEORY SCIENTISTS EXPERIMENT OBSERVATIONS SCIENTIFIC EXPERIMENTS HYPOTHESIS EXPLAIN SCIENTIST OBSERVED EXPLANATION BASED OBSERVATION IDEA EVIDENCE THEORIES BELIEVED DISCOVERED OBSERVE FACTS SPACE EARTH MOON PLANET ROCKET MARS ORBIT ASTRONAUTS FIRST SPACECRAFT JUPITER SATELLITE SATELLITES ATMOSPHERE SPACESHIP SURFACE SCIENTISTS ASTRONAUT SATURN MILES ART PAINT ARTIST PAINTING PAINTED ARTISTS MUSEUM WORK PAINTINGS STYLE PICTURES WORKS OWN SCULPTURE PAINTER ARTS BEAUTIFUL DESIGNS PORTRAIT PAINTERS STUDENTS TEACHER STUDENT TEACHERS TEACHING CLASS CLASSROOM SCHOOL LEARNING PUPILS CONTENT INSTRUCTION TAUGHT GROUP GRADE SHOULD GRADES CLASSES PUPIL GIVEN BRAIN NERVE SENSE SENSES ARE NERVOUS NERVES BODY SMELL TASTE TOUCH MESSAGES IMPULSES CORD ORGANS SPINAL FIBERS SENSORY PAIN IS CURRENT ELECTRICITY ELECTRIC CIRCUIT IS ELECTRICAL VOLTAGE FLOW BATTERY WIRE WIRES SWITCH CONNECTED ELECTRONS RESISTANCE POWER CONDUCTORS CIRCUITS TUBE NEGATIVE A selection from 500 topics [ P(w|z = j) ]

17. FIELD MAGNETIC MAGNET WIRE NEEDLE CURRENT COIL POLES IRON COMPASS LINES CORE ELECTRIC DIRECTION FORCE MAGNETS BE MAGNETISM POLE INDUCED SCIENCE STUDY SCIENTISTS SCIENTIFIC KNOWLEDGE WORK RESEARCH CHEMISTRY TECHNOLOGY MANY MATHEMATICS BIOLOGY FIELD PHYSICS LABORATORY STUDIES WORLD SCIENTIST STUDYING SCIENCES BALL GAME TEAM FOOTBALL BASEBALL PLAYERS PLAY FIELD PLAYER BASKETBALL COACH PLAYED PLAYING HIT TENNIS TEAMS GAMES SPORTS BAT TERRY JOB WORK JOBS CAREER EXPERIENCE EMPLOYMENT OPPORTUNITIES WORKING TRAINING SKILLS CAREERS POSITIONS FIND POSITION FIELD OCCUPATIONS REQUIRE OPPORTUNITY EARN ABLE Words can have high probability in multiple topics

18. Disambiguation Give example for field

19. Topics versus LSA Latent Semantic Analysis (LSI/LSA) –Projects words into a K-dimensional hidden space –Less interpretable –Not generalizable –Not as accurate MONEY LOAN CASH RIVER BANK BILL (high dimensional space)

20. Modeling Word Association

21. Word Association (norms from Nelson et al. 1998) CUE: PLANET

22. people EARTH STARS SPACE SUN MARS UNIVERSE SATURN GALAXY associate number 1 2 3 4 5 6 7 8 Word Association (norms from Nelson et al. 1998) CUE: PLANET (vocabulary = 5000+ words)

23. Topic model for Word Association Association as a problem of prediction: –Given that a single word is observed, predict what other words might occur in that context Under a single topic assumption: Response Cue

24. people EARTH STARS SPACE SUN MARS UNIVERSE SATURN GALAXY model STARS STAR SUN EARTH SPACE SKY PLANET UNIVERSE associate number 1 2 3 4 5 6 7 8 Word Association (norms from Nelson et al. 1998) CUE: PLANET First associate “EARTH” is in the set of 8 associates (from the model)

25. P( set contains first associate ) LSA TOPICS

26. Why would LSA perform worse? Cosine similarity measure imposes unnecessary constraints on representations, e.g. –Symmetry –Triangle inequality

27. Violation of triangle inequality Can find associations that violate this: A BC AC  AB + BC SOCCER FIELD MAGNETIC

28. No Triangle Inequality with Topics SOCCER MAGNETIC FIELD TOPIC 1 TOPIC 2 Topic structure easily explains violations of triangle inequality

29. Modeling Episodic Memory

30. Semantic Isolation Effect Study this list: PEAS, CARROTS, BEANS, SPINACH, LETTUCE, HAMMER, TOMATOES, CORN, CABBAGE, SQUASH HAMMER, PEAS, CARROTS,...

31. Semantic Isolation Effect Verbal explanations: –Attention, surprise, distinctiveness Our approach: memory system is trading off two encoding resources –Storing specific words (e.g. “hammer”) –Storing general theme of list (e.g. “vegetables”)

32. Computational Problem How to tradeoff specificity and generality? –Remembering detail and gist  Special word topic model

33. Special word topic (SW) model Each word can be generated via one route –Topics –Special words distribution (unique to a document) Conditional prob. of a word under a document:

34. Study words PEAS CARROTS BEANS SPINACH LETTUCE HAMMER TOMATOES CORN CABBAGE SQUASH ENCODING RETRIEVAL Special

35. Hunt & Lamb (2001 exp. 1) OUTLIER LIST PEAS CARROTS BEANS SPINACH LETTUCE HAMMER TOMATOES CORN CABBAGE SQUASH CONTROL LIST SAW SCREW CHISEL DRILL SANDPAPER HAMMER NAILS BENCH RULER ANVIL

36. Model Predictions

37. False memory effects MAD FEAR HATE SMOOTH NAVY HEAT SALAD TUNE COURTS CANDY PALACE PLUSH TOOTH BLIND WINTER Number of Associates 369 MAD FEAR HATE RAGE TEMPER FURY SALAD TUNE COURTS CANDY PALACE PLUSH TOOTH BLIND WINTER MAD FEAR HATE RAGE TEMPER FURY WRATH HAPPY FIGHT CANDY PALACE PLUSH TOOTH BLIND WINTER (lure = ANGER) Robinson & Roediger (1997)

38. Relation to Dual Process Models Gist/Verbatim distinction (e.g. Reyna, Brainerd, 1995) –Maps onto topics and special words Our approach specifies both encoding and retrieval representations and processes –Routes are not independent –Model explains performance for actual word lists

39. Applications I

40. Topics provide quick summary of content What is in this corpus? What is in this document? What are the topical trends over time? Who writes on this topic?

41. 330,000 articles 2000-2002 Analyzing the New York Times

42. Three investigations began Thursday into the securities and exchange_commission's choice of william_webster to head a new board overseeing the accounting profession. house and senate_democrats called for the resignations of both judge_webster and harvey_pitt, the commission's chairman. The white_house expressed support for judge_webster as well as for harvey_pitt, who was harshly criticized Thursday for failing to inform other commissioners before they approved the choice of judge_webster that he had led the audit committee of a company facing fraud accusations. “The president still has confidence in harvey_pitt,” said dan_bartlett, bush's communications director … Extracted Named Entities Used standard algorithms to extract named entities: - People - Places - Organizations

43. Standard Topic Model with Entities

45. Topic Trends Tour-de-France Anthrax Quarterly Earnings Proportion of words assigned to topic for that time slice

46. Example of Extracted Entity-Topic Network

47. Prediction of Missing Entities in Text Shares of XXXX slid 8 percent, or $1.10, to $12.65 Tuesday, as major credit agencies said the conglomerate would still be challenged in repaying its debts, despite raising $4.6 billion Monday in taking its finance group public. Analysts at XXXX Investors service in XXXX said they were keeping XXXX and its subsidiaries under review for a possible debt downgrade, saying the company “will continue to face a significant debt burden,'' with large slices of debt coming due, over the next 18 months. XXXX said … Test article with entities removed

48. Prediction of Missing Entities in Text Shares of XXXX slid 8 percent, or $1.10, to $12.65 Tuesday, as major credit agencies said the conglomerate would still be challenged in repaying its debts, despite raising $4.6 billion Monday in taking its finance group public. Analysts at XXXX Investors service in XXXX said they were keeping XXXX and its subsidiaries under review for a possible debt downgrade, saying the company “will continue to face a significant debt burden,'' with large slices of debt coming due, over the next 18 months. XXXX said … fitch goldman-sachs lehman-brother moody morgan-stanley new-york- stock-exchange standard-and-poor tyco tyco-international wall-street worldco Test article with entities removed Actual missing entities

49. Prediction of Missing Entities in Text Shares of XXXX slid 8 percent, or $1.10, to $12.65 Tuesday, as major credit agencies said the conglomerate would still be challenged in repaying its debts, despite raising $4.6 billion Monday in taking its finance group public. Analysts at XXXX Investors service in XXXX said they were keeping XXXX and its subsidiaries under review for a possible debt downgrade, saying the company “will continue to face a significant debt burden,'' with large slices of debt coming due, over the next 18 months. XXXX said … fitch goldman-sachs lehman-brother moody morgan-stanley new-york- stock-exchange standard-and-poor tyco tyco-international wall-street worldco wall-street new-york nasdaq securities-exchange-commission sec merrill- lynch new-york-stock-exchange goldman-sachs standard-and-poor Test article with entities removed Actual missing entities Predicted entities given observed words (matches in blue)

50. Applications II

51. Faculty Browser System collects PDF files from websites –UCI –UCSD Applies topic model on text extracted from PDFs Display faculty research with topics Demo: http://yarra.calit2.uci.edu/calit2/ http://yarra.calit2.uci.edu/calit2/

53. one topic most prolific researchers for this topic

54. topics this researcher works on other researchers with similar topical interests one researcher

55. Conclusions

56. Human Memory Information Retrieval Finding relevant memories Finding relevant documents

57. Software Public-domain MATLAB toolbox for topic modeling on the Web: http://psiexp.ss.uci.edu/research/programs_data/toolbox.htm

58. Hidden Markov Topic Model

59. Hidden Markov Topics Model Syntactic dependencies  short range dependencies Semantic dependencies  long-range  zz zz zz zz ww ww ww ww ss ss ss ss Semantic state: generate words from topic model Syntactic states: generate words from HMM (Griffiths, Steyvers, Blei, & Tenenbaum, 2004)

60. HEART 0.2 LOVE 0.2 SOUL 0.2 TEARS 0.2 JOY 0.2 z = 1 0.4 SCIENTIFIC 0.2 KNOWLEDGE 0.2 WORK 0.2 RESEARCH 0.2 MATHEMATICS 0.2 z = 2 0.6 THE 0.6 A 0.3 MANY 0.1 OF 0.6 FOR 0.3 BETWEEN 0.1 0.9 0.1 0.2 0.8 0.7 0.3 Transition between semantic state and syntactic states

61. THE ……………………………… HEART 0.2 LOVE 0.2 SOUL 0.2 TEARS 0.2 JOY 0.2 z = 1 0.4 SCIENTIFIC 0.2 KNOWLEDGE 0.2 WORK 0.2 RESEARCH 0.2 MATHEMATICS 0.2 z = 2 0.6 x = 1 THE 0.6 A 0.3 MANY 0.1 x = 3 OF 0.6 FOR 0.3 BETWEEN 0.1 x = 2 0.9 0.1 0.2 0.8 0.7 0.3 Combining topics and syntax

62. THE LOVE…………………… HEART 0.2 LOVE 0.2 SOUL 0.2 TEARS 0.2 JOY 0.2 z = 1 0.4 SCIENTIFIC 0.2 KNOWLEDGE 0.2 WORK 0.2 RESEARCH 0.2 MATHEMATICS 0.2 z = 2 0.6 x = 1 THE 0.6 A 0.3 MANY 0.1 x = 3 OF 0.6 FOR 0.3 BETWEEN 0.1 x = 2 0.9 0.1 0.2 0.8 0.7 0.3 Combining topics and syntax

63. THE LOVE OF……………… HEART 0.2 LOVE 0.2 SOUL 0.2 TEARS 0.2 JOY 0.2 z = 1 0.4 SCIENTIFIC 0.2 KNOWLEDGE 0.2 WORK 0.2 RESEARCH 0.2 MATHEMATICS 0.2 z = 2 0.6 x = 1 THE 0.6 A 0.3 MANY 0.1 x = 3 OF 0.6 FOR 0.3 BETWEEN 0.1 x = 2 0.9 0.1 0.2 0.8 0.7 0.3 Combining topics and syntax

64. THE LOVE OF RESEARCH …… HEART 0.2 LOVE 0.2 SOUL 0.2 TEARS 0.2 JOY 0.2 z = 1 0.4 SCIENTIFIC 0.2 KNOWLEDGE 0.2 WORK 0.2 RESEARCH 0.2 MATHEMATICS 0.2 z = 2 0.6 x = 1 THE 0.6 A 0.3 MANY 0.1 x = 3 OF 0.6 FOR 0.3 BETWEEN 0.1 x = 2 0.9 0.1 0.2 0.8 0.7 0.3 Combining topics and syntax

65. FOOD FOODS BODY NUTRIENTS DIET FAT SUGAR ENERGY MILK EATING FRUITS VEGETABLES WEIGHT FATS NEEDS CARBOHYDRATES VITAMINS CALORIES PROTEIN MINERALS MAP NORTH EARTH SOUTH POLE MAPS EQUATOR WEST LINES EAST AUSTRALIA GLOBE POLES HEMISPHERE LATITUDE PLACES LAND WORLD COMPASS CONTINENTS DOCTOR PATIENT HEALTH HOSPITAL MEDICAL CARE PATIENTS NURSE DOCTORS MEDICINE NURSING TREATMENT NURSES PHYSICIAN HOSPITALS DR SICK ASSISTANT EMERGENCY PRACTICE BOOK BOOKS READING INFORMATION LIBRARY REPORT PAGE TITLE SUBJECT PAGES GUIDE WORDS MATERIAL ARTICLE ARTICLES WORD FACTS AUTHOR REFERENCE NOTE GOLD IRON SILVER COPPER METAL METALS STEEL CLAY LEAD ADAM ORE ALUMINUM MINERAL MINE STONE MINERALS POT MINING MINERS TIN BEHAVIOR SELF INDIVIDUAL PERSONALITY RESPONSE SOCIAL EMOTIONAL LEARNING FEELINGS PSYCHOLOGISTS INDIVIDUALS PSYCHOLOGICAL EXPERIENCES ENVIRONMENT HUMAN RESPONSES BEHAVIORS ATTITUDES PSYCHOLOGY PERSON CELLS CELL ORGANISMS ALGAE BACTERIA MICROSCOPE MEMBRANE ORGANISM FOOD LIVING FUNGI MOLD MATERIALS NUCLEUS CELLED STRUCTURES MATERIAL STRUCTURE GREEN MOLDS Semantic topics PLANTS PLANT LEAVES SEEDS SOIL ROOTS FLOWERS WATER FOOD GREEN SEED STEMS FLOWER STEM LEAF ANIMALS ROOT POLLEN GROWING GROW

66. GOOD SMALL NEW IMPORTANT GREAT LITTLE LARGE * BIG LONG HIGH DIFFERENT SPECIAL OLD STRONG YOUNG COMMON WHITE SINGLE CERTAIN THE HIS THEIR YOUR HER ITS MY OUR THIS THESE A AN THAT NEW THOSE EACH MR ANY MRS ALL MORE SUCH LESS MUCH KNOWN JUST BETTER RATHER GREATER HIGHER LARGER LONGER FASTER EXACTLY SMALLER SOMETHING BIGGER FEWER LOWER ALMOST ON AT INTO FROM WITH THROUGH OVER AROUND AGAINST ACROSS UPON TOWARD UNDER ALONG NEAR BEHIND OFF ABOVE DOWN BEFORE SAID ASKED THOUGHT TOLD SAYS MEANS CALLED CRIED SHOWS ANSWERED TELLS REPLIED SHOUTED EXPLAINED LAUGHED MEANT WROTE SHOWED BELIEVED WHISPERED ONE SOME MANY TWO EACH ALL MOST ANY THREE THIS EVERY SEVERAL FOUR FIVE BOTH TEN SIX MUCH TWENTY EIGHT HE YOU THEY I SHE WE IT PEOPLE EVERYONE OTHERS SCIENTISTS SOMEONE WHO NOBODY ONE SOMETHING ANYONE EVERYBODY SOME THEN Syntactic classes BE MAKE GET HAVE GO TAKE DO FIND USE SEE HELP KEEP GIVE LOOK COME WORK MOVE LIVE EAT BECOME

67. MODEL ALGORITHM SYSTEM CASE PROBLEM NETWORK METHOD APPROACH PAPER PROCESS IS WAS HAS BECOMES DENOTES BEING REMAINS REPRESENTS EXISTS SEEMS SEE SHOW NOTE CONSIDER ASSUME PRESENT NEED PROPOSE DESCRIBE SUGGEST USED TRAINED OBTAINED DESCRIBED GIVEN FOUND PRESENTED DEFINED GENERATED SHOWN IN WITH FOR ON FROM AT USING INTO OVER WITHIN HOWEVER ALSO THEN THUS THEREFORE FIRST HERE NOW HENCE FINALLY #*IXTN-CFP#*IXTN-CFP EXPERTS EXPERT GATING HME ARCHITECTURE MIXTURE LEARNING MIXTURES FUNCTION GATE DATA GAUSSIAN MIXTURE LIKELIHOOD POSTERIOR PRIOR DISTRIBUTION EM BAYESIAN PARAMETERS STATE POLICY VALUE FUNCTION ACTION REINFORCEMENT LEARNING CLASSES OPTIMAL * MEMBRANE SYNAPTIC CELL * CURRENT DENDRITIC POTENTIAL NEURON CONDUCTANCE CHANNELS IMAGE IMAGES OBJECT OBJECTS FEATURE RECOGNITION VIEWS # PIXEL VISUAL KERNEL SUPPORT VECTOR SVM KERNELS # SPACE FUNCTION MACHINES SET NETWORK NEURAL NETWORKS OUPUT INPUT TRAINING INPUTS WEIGHTS # OUTPUTS NIPS Semantics NIPS Syntax

68. Random sentence generation LANGUAGE: [S] RESEARCHERS GIVE THE SPEECH [S] THE SOUND FEEL NO LISTENERS [S] WHICH WAS TO BE MEANING [S] HER VOCABULARIES STOPPED WORDS [S] HE EXPRESSLY WANTED THAT BETTER VOWEL

69. Nested Chinese Restaurant Process

70. Topic Hierarchies In regular topic model, no relations between topics topic 1 topic 2 topic 3 topic 4 topic 5 topic 6 topic 7 Nested Chinese Restaurant Process –Blei, Griffiths, Jordan, Tenenbaum (2004) –Learn hierarchical structure, as well as topics within structure

71. Example: Psych Review Abstracts RESPONSE STIMULUS REINFORCEMENT RECOGNITION STIMULI RECALL CHOICE CONDITIONING SPEECH READING WORDS MOVEMENT MOTOR VISUAL WORD SEMANTIC ACTION SOCIAL SELF EXPERIENCE EMOTION GOALS EMOTIONAL THINKING GROUP IQ INTELLIGENCE SOCIAL RATIONAL INDIVIDUAL GROUPS MEMBERS SEX EMOTIONS GENDER EMOTION STRESS WOMEN HEALTH HANDEDNESS REASONING ATTITUDE CONSISTENCY SITUATIONAL INFERENCE JUDGMENT PROBABILITIES STATISTICAL IMAGE COLOR MONOCULAR LIGHTNESS GIBSON SUBMOVEMENT ORIENTATION HOLOGRAPHIC CONDITIONIN STRESS EMOTIONAL BEHAVIORAL FEAR STIMULATION TOLERANCE RESPONSES A MODEL MEMORY FOR MODELS TASK INFORMATION RESULTS ACCOUNT SELF SOCIAL PSYCHOLOGY RESEARCH RISK STRATEGIES INTERPERSONAL PERSONALITY SAMPLING MOTION VISUAL SURFACE BINOCULAR RIVALRY CONTOUR DIRECTION CONTOURS SURFACES DRUG FOOD BRAIN AROUSAL ACTIVATION AFFECTIVE HUNGER EXTINCTION PAIN THE OF AND TO IN A IS

72. Generative Process RESPONSE STIMULUS REINFORCEMENT RECOGNITION STIMULI RECALL CHOICE CONDITIONING SPEECH READING WORDS MOVEMENT MOTOR VISUAL WORD SEMANTIC ACTION SOCIAL SELF EXPERIENCE EMOTION GOALS EMOTIONAL THINKING GROUP IQ INTELLIGENCE SOCIAL RATIONAL INDIVIDUAL GROUPS MEMBERS SEX EMOTIONS GENDER EMOTION STRESS WOMEN HEALTH HANDEDNESS REASONING ATTITUDE CONSISTENCY SITUATIONAL INFERENCE JUDGMENT PROBABILITIES STATISTICAL IMAGE COLOR MONOCULAR LIGHTNESS GIBSON SUBMOVEMENT ORIENTATION HOLOGRAPHIC CONDITIONIN STRESS EMOTIONAL BEHAVIORAL FEAR STIMULATION TOLERANCE RESPONSES A MODEL MEMORY FOR MODELS TASK INFORMATION RESULTS ACCOUNT SELF SOCIAL PSYCHOLOGY RESEARCH RISK STRATEGIES INTERPERSONAL PERSONALITY SAMPLING MOTION VISUAL SURFACE BINOCULAR RIVALRY CONTOUR DIRECTION CONTOURS SURFACES DRUG FOOD BRAIN AROUSAL ACTIVATION AFFECTIVE HUNGER EXTINCTION PAIN THE OF AND TO IN A IS