Presentation is loading. Please wait.

Presentation is loading. Please wait.

Supplementary Figure S1 Percentage of peaks from Trf1 +/+ p53 -/- -Cre vs Trf1  /  p53 -/- -Cre comparison that are located in non subtelomeric and subtelomeric.

Published byVirginia Oliver Modified over 8 years ago

Similar presentations

Presentation on theme: "Supplementary Figure S1 Percentage of peaks from Trf1 +/+ p53 -/- -Cre vs Trf1  /  p53 -/- -Cre comparison that are located in non subtelomeric and subtelomeric."— Presentation transcript:

1 Supplementary Figure S1 Percentage of peaks from Trf1 +/+ p53 -/- -Cre vs Trf1  /  p53 -/- -Cre comparison that are located in non subtelomeric and subtelomeric regions (-3Mbp from telomeres). Note that there is no enrichment in peaks in subtelomeres comparing with the random average of enrichment in the rest of the genome. The chromosomes with higher percentage of peaks in S regions are 4 and 8.

2 B A Supplementary Figure S2 Distribution of TRF1 peaks in the Trf1 +/+ p53 -/- -Cre vs Trf1  /  p53 -/- -Cre comparison. (A) Distance from genes Transcription Start Sites (TSS). Note that most of the peaks are  10kbp from the genes TSS. (B) Distribution of peaks distribution from those that mapped inside a gene. Note that 88.4% of the peaks are intronic. Distance from TSS 0 5 10 15 20 25  -100kb -100kb- -10kb -10kb- -5kb -5kb- -3kb -3kb - -1kb-1kb – 0kb 0kb – 1kb 1kb – 3kb3kb – 5kb 5kb - 10kb 10kb - 100kb  100kb Binding sites (%) % of Peaks overlapping gene features

3 Supplementary Figure S3 Percentage of peaks from the Terc -/- G3 vs wild-type comparison that are located in non subtelomeric and subtelomeric regions (-3Mbp from telomeres). There is no enrichment in peaks in subtelomeres comparing with the random average of enrichment in any other region in the genome.

Download ppt "Supplementary Figure S1 Percentage of peaks from Trf1 +/+ p53 -/- -Cre vs Trf1  /  p53 -/- -Cre comparison that are located in non subtelomeric and subtelomeric."

Similar presentations

Female DNase: Male DNase: Female Control: Male Control: Figure S1: Overview of DNase hypersensitivity on chr5. Shown are all sequence reads across the.

Female DNase: Male DNase: Female Control: Male Control: Figure S1: Overview of DNase hypersensitivity on chr5. Shown are all sequence reads across the.
The orientation of a transposon insertion is reported with respect to the transposon's inherent asymmetry, like the P-element's distinct 5' and 3' ends.

The orientation of a transposon insertion is reported with respect to the transposon's inherent asymmetry, like the P-element's distinct 5' and 3' ends.
Supplementary Figure S1 Distribution of observed (blue) and Poisson expected (red) standard deviation of human-chimpanzee divergence over different window.

Supplementary Figure S1 Distribution of observed (blue) and Poisson expected (red) standard deviation of human-chimpanzee divergence over different window.
Breakdown of 244 total (Yale+Vega) Pseudogenes Amongst Various ENCODE Regions 211 Yale, 178 Vega, Union is 244 More pseudogenes in the manually picked.

Breakdown of 244 total (Yale+Vega) Pseudogenes Amongst Various ENCODE Regions 211 Yale, 178 Vega, Union is 244 More pseudogenes in the manually picked.
BME 130 – Genomes Lecture 14 Eukaryotic Genome Anatomy.

BME 130 – Genomes Lecture 14 Eukaryotic Genome Anatomy.
Supplemental Figure 1. Relationship between peaksize and signal values in the NCOR1 data set. Peaks with a signal value lower than 2 (red line) were discarded.

Supplemental Figure 1. Relationship between peaksize and signal values in the NCOR1 data set. Peaks with a signal value lower than 2 (red line) were discarded.
Supplementary Material Epigenetic histone modifications of human transposable elements: genome defense versus exaptation Ahsan Huda, Leonardo Mariño-Ramírez.

Supplementary Material Epigenetic histone modifications of human transposable elements: genome defense versus exaptation Ahsan Huda, Leonardo Mariño-Ramírez.
Controls for TTS identification using PET A series of controls were implemented in order to evaluate the potential contamination by internal priming in.

Controls for TTS identification using PET A series of controls were implemented in order to evaluate the potential contamination by internal priming in.
©2000 Timothy G. Standish John 15:4 4Abide in me, and I in you. As the branch cannot bear fruit of itself, except it abide in the vine; no more can ye,

©2000 Timothy G. Standish John 15:4 4Abide in me, and I in you. As the branch cannot bear fruit of itself, except it abide in the vine; no more can ye,
Supplemental Figure 1A. A small fraction of genes were mapped to >=20 SNPs. Supplemental Figure 1B. The density of distance from the position of an associated.

Supplemental Figure 1A. A small fraction of genes were mapped to >=20 SNPs. Supplemental Figure 1B. The density of distance from the position of an associated.
A B IL-4(+) IL-4(-) IL-4(+) IL-4(-) ChIP-Seq (STAT6) Ramos IL-4 (+) P-value Ramos IL-4 (-) P-value BEAS2B IL-4 (+) P-value BEASB IL-4 (-) P-value fold.

A B IL-4(+) IL-4(-) IL-4(+) IL-4(-) ChIP-Seq (STAT6) Ramos IL-4 (+) P-value Ramos IL-4 (-) P-value BEAS2B IL-4 (+) P-value BEASB IL-4 (-) P-value fold.
Log 2 (expression) H3K4me2 score A SLAMF6 log 2 (expression) Supplementary Fig. 1. H3K4me2 profiles vary significantly between loci of genes expressed.

Log 2 (expression) H3K4me2 score A SLAMF6 log 2 (expression) Supplementary Fig. 1. H3K4me2 profiles vary significantly between loci of genes expressed.
Compound cis-regulatory elements with both boundary and enhancer functions in the human genome Daudi Jjingo 1, Jianrong Wang 1, Andrew B. Conley 1, Victoria.

Compound cis-regulatory elements with both boundary and enhancer functions in the human genome Daudi Jjingo 1, Jianrong Wang 1, Andrew B. Conley 1, Victoria.
Supplementary Fig. 1 Supplementary Figure 1. Distributions of (A) exon and (B) intron lengths in O. sativa and A. thaliana genes. Green bars are used for.

Supplementary Fig. 1 Supplementary Figure 1. Distributions of (A) exon and (B) intron lengths in O. sativa and A. thaliana genes. Green bars are used for.
A high-resolution map of human evolutionary constraints using 29 mammals Kerstin Lindblad-Toh et al. 2011 Presentation by Robert Lewis and Kaylee Wells.

A high-resolution map of human evolutionary constraints using 29 mammals Kerstin Lindblad-Toh et al Presentation by Robert Lewis and Kaylee Wells.
Physical Map and Organization of Arabidopsis thaliana Chromosome 4

Physical Map and Organization of Arabidopsis thaliana Chromosome 4
Figure S1. Statistics of the distances from IPACs to nearby genes

Figure S1. Statistics of the distances from IPACs to nearby genes
Chen_SupMat 5 – Figure S3. Distribution of private alleles in B

Chen_SupMat 5 – Figure S3. Distribution of private alleles in B
Functional annotation of ChIP-peaks

Functional annotation of ChIP-peaks
Supplementary Fig. 1 Supplementary Figure 1. Distributions of (A) exon and (B) intron lengths in O. sativa and A. thaliana genes. Green bars are used.

Supplementary Fig. 1 Supplementary Figure 1. Distributions of (A) exon and (B) intron lengths in O. sativa and A. thaliana genes. Green bars are used.

Similar presentations

Ads by Google