Comparability of methods and analysers Nora Nikolac

Slides:



Advertisements
Similar presentations
Methods Comparison Studies for Quantitative Nucleic Acid Assays
Advertisements

May F. Mo FDA/Industry Statistics Workshop
Forecasting Using the Simple Linear Regression Model and Correlation
BA 275 Quantitative Business Methods
6-1 Introduction To Empirical Models 6-1 Introduction To Empirical Models.
Regression Analysis Once a linear relationship is defined, the independent variable can be used to forecast the dependent variable. Y ^ = bo + bX bo is.
Probabilistic & Statistical Techniques Eng. Tamer Eshtawi First Semester Eng. Tamer Eshtawi First Semester
Prediction, Correlation, and Lack of Fit in Regression (§11. 4, 11
Correlation and Regression
Objectives (BPS chapter 24)
LECTURE 3 Introduction to Linear Regression and Correlation Analysis
Chapter 10 Simple Regression.
Regression Analysis. Unscheduled Maintenance Issue: l 36 flight squadrons l Each experiences unscheduled maintenance actions (UMAs) l UMAs costs $1000.
Multivariate Data Analysis Chapter 4 – Multiple Regression.
The Simple Regression Model
Chapter Eighteen MEASURES OF ASSOCIATION
Chapter Topics Types of Regression Models
Topics: Regression Simple Linear Regression: one dependent variable and one independent variable Multiple Regression: one dependent variable and two or.
Simple Linear Regression Analysis
Quantitative Business Analysis for Decision Making Simple Linear Regression.
© 2000 Prentice-Hall, Inc. Chap Forecasting Using the Simple Linear Regression Model and Correlation.
Measures of Association Deepak Khazanchi Chapter 18.
Chapter 7 Forecasting with Simple Regression
Simple Linear Regression Analysis
Chemometrics Method comparison
1 1 Slide © 2008 Thomson South-Western. All Rights Reserved Slides by JOHN LOUCKS & Updated by SPIROS VELIANITIS.
Method Comparison A method comparison is done when: A lab is considering performing an assay they have not performed previously or Performing an assay.
Correlation & Regression
Objectives of Multiple Regression
Introduction to Linear Regression and Correlation Analysis
Regression Analysis Regression analysis is a statistical technique that is very useful for exploring the relationships between two or more variables (one.
Inference for regression - Simple linear regression
Chapter 11 Simple Regression
STATISTICS: BASICS Aswath Damodaran 1. 2 The role of statistics Aswath Damodaran 2  When you are given lots of data, and especially when that data is.
OPIM 303-Lecture #8 Jose M. Cruz Assistant Professor.
Biostatistics: Measures of Central Tendency and Variance in Medical Laboratory Settings Module 5 1.
Chapter 12 Examining Relationships in Quantitative Research Copyright © 2013 by The McGraw-Hill Companies, Inc. All rights reserved. McGraw-Hill/Irwin.
Statistical Analysis. Statistics u Description –Describes the data –Mean –Median –Mode u Inferential –Allows prediction from the sample to the population.
Prof. of Clinical Chemistry, Mansoura University.
1 1 Slide © 2014 Cengage Learning. All Rights Reserved. May not be scanned, copied or duplicated, or posted to a publicly accessible website, in whole.
Examining Relationships in Quantitative Research
Lecture 8 Simple Linear Regression (cont.). Section Objectives: Statistical model for linear regression Data for simple linear regression Estimation.
Inference for Regression Simple Linear Regression IPS Chapter 10.1 © 2009 W.H. Freeman and Company.
Chapter 4 Linear Regression 1. Introduction Managerial decisions are often based on the relationship between two or more variables. For example, after.
ITEC6310 Research Methods in Information Technology Instructor: Prof. Z. Yang Course Website: c6310.htm Office:
© Copyright McGraw-Hill Correlation and Regression CHAPTER 10.
Chapter 16 Data Analysis: Testing for Associations.
Business Statistics: A Decision-Making Approach, 6e © 2005 Prentice-Hall, Inc. Chap 13-1 Introduction to Regression Analysis Regression analysis is used.
Statistical planning and Sample size determination.
Examining Relationships in Quantitative Research
Introduction to Biostatistics and Bioinformatics Regression and Correlation.
© 2006 by The McGraw-Hill Companies, Inc. All rights reserved. 1 Chapter 12 Testing for Relationships Tests of linear relationships –Correlation 2 continuous.
Verification of qualitative methods
Quality control & Statistics. Definition: it is the science of gathering, analyzing, interpreting and representing data. Example: introduction a new test.
Lesson 14 - R Chapter 14 Review. Objectives Summarize the chapter Define the vocabulary used Complete all objectives Successfully answer any of the review.
Copyright © 2011 by The McGraw-Hill Companies, Inc. All rights reserved. McGraw-Hill/Irwin Simple Linear Regression Analysis Chapter 13.
McGraw-Hill/Irwin © 2003 The McGraw-Hill Companies, Inc.,All Rights Reserved. Part Four ANALYSIS AND PRESENTATION OF DATA.
Chapter 11: Linear Regression E370, Spring From Simple Regression to Multiple Regression.
Clinical practice involves measuring quantities for a variety of purposes, such as: aiding diagnosis, predicting future patient outcomes, serving as endpoints.
Chapter 14 Introduction to Multiple Regression
Statistical Quality Control, 7th Edition by Douglas C. Montgomery.
BIVARIATE REGRESSION AND CORRELATION
S519: Evaluation of Information Systems
Correlation and Simple Linear Regression
به نام خدا تضمين کيفيت در آزمايشگاه
Correlation and Simple Linear Regression
Simple Linear Regression
Simple Linear Regression and Correlation
Correlation and Simple Linear Regression
Correlation and Simple Linear Regression
Presentation transcript:

Comparability of methods and analysers Nora Nikolac Zagreb, October 24-25, 2015 15th EFLM Continuing Postgraduate Course in Clinical Chemistry and Laboratory

When? Introducing new method or analyzer Multiple analytical systems in laboratory Using services of another laboratory

Why? To increase patient safety To assure that method change is not going to influence laboratory result for the patient.

How? Experimental procedures following protocols CLSI EP09-A3: Measurement procedure comparison and bias estimation using patient samples Number of samples Measurement range Time of analysis Data analysis Data interpretation

1. Number of samples Min: 40 samples Optimal: 100 samples To identify unexpected errors from sample matrix or interferences Measurements in duplicate

2. Measurement range Cover 90% of the method measurement range Method B Good agreement between methods Difference in higher concentration range Method A Measurement range

2. Measurement range Overlaping measurement range for both methods Method A determined using dilution protocol Method A Glucose concentration Method B Method B reported as LOQ

3. Time of analysis Measurements done within 2 hours Not for: glucose, lactate, ammonia, blood gass testing... Measurements done over 5 days Better over longer period of time Collecting samples over period of time (first method) and analyzing in batch using second method

4. Analyzing results Several statistical aproaches: Correlation Paired test for difference Linear regression Deming regression Passing-Bablok regresion Bland-Altman analysis

4. Analyzing results Comparison of two methods for direct bilirubin concentration measurement Summary data Method 1 N=40 Method 2 Analyzer, method Architect (Abbott) Diazo method AU 680 (Beckman Coulter) DPD method Min-Max 2.7-232.3 5.5-273.4 Mean ± SD 65.5 ± 67.9 82.4 ± 83.6 Median (IQR) 38.5 (7.9-127.8) 42.4 (11.1-158.2) P (normality) 0.059 0.036

Excellant correlation Spearman coefficient of correlation r (95% CI) = 0.97 (0.95-0.98) Excellant correlation

What is the meaning of this result? Methods are significantly associated Linear relation between methods ↑ of Method A associated with ↑ of Method B Nothing about amount of increase! Same correlation coefficient!

4.2 Significance of difference Wilcoxon test (normality failed) P < 0.001 Significant difference between methods

What is the meaning of this result? Calculating differences for each pair of measurement Comparing number of negative and positive differences If there is no difference between methods, number of differences is equal More measurements were higher using Method 2

4.3 Linear regression High correlation Linear relationship Equation to describe relationship between methods Determine proportional and constant error Deming regression Passing and Bablok regression Bilić-Zulle L. Comparison of methods: Passing and Bablok regression. Biochem Med (Zagreb) 2011;21:49-52.

Linear regression 95% confidence intervals Regression equation y = x Method B y Regression equation y = a + bx tg (α) = b Regression equation y = a (95% CI) + b (95% CI) x α Intercept = a x Method A

Constant and proportional error Regression equation y = a (95% CI) + b (95% CI) x Excluding 0 Constant error Excluding 1 Proportional error Method B y y = x tg (α) = b α Intercept = a x Method A

Deming regression Includes analytical variability of both methods (CV) Assumes that errors are independent and normally distributed Both methods prone to errors y = 1.74 (-1.77 to 5.24) + 1.23 (1.16 to 1.30) x No constant error Proportional error

Passing-Bablok regression Non-parametric method No assumptions about distributions of samples No assumptions about distributions of errors Not sensitive to outliers

Why don’t we recalculate results? Direct bilirubin (Method 2) = 1.23 x Direct bilirubin (Method 1) Direct bilirubin (Method 1) = Direct bilirubin (Method 2) / 1.23

Residual analysis How well data fit to the regression model Y – F(X)

Differences between measured and calculated values Residual analysis Differences between measured and calculated values

4.3 Bland-Altman analysis Graphical method to compare two measurements technique Analyzing differences between measurement pairs Giavarina D. Understanding Bland Altman analysis. Biochem Med (Zagreb) 2015;25(2):141-51.

More positive differences Mountain plot More positive differences Normal distribution of differences

4.3 Bland-Altman analysis Plotting differences against: Mean of two methods (no reference method) One method (reference method) +1.96 s Limits of agreement Mean of method 1 and method 2 method 2 – method 1 95% CI Mean difference 95% CI Limits of agreement -1.96 s

LoA and mean difference Absolute units Constant bias Wide LoA = poor agreement Including 0 = no constant bias Excluding 0 = Constant bias Narrow LoA = good agreement Percentage (%) Proportional bias

Bland-Altman analysis Plotting against % difference Plotting against mean difference No constant bias Proportional bias

5. Data interpretation Statistical significance Clinical significance Comparing values with predefined acceptance criteia

Method comparison Important laboratory procedure for verification Included into validation protocols for new reagents Comparison with the reference method Comparison with different manufacturers Comparison with same manufacturer Results are presented in manufacturers declarations

Can we rely on manufacturers declarations? Correlation for determination of agreement Comparing 7 insert sheets for glucose concentration measurement Manufacturer N Unit r Intercept (95% CI) Slope A 102 mg/dL 0.9993 -4.54 (?-?) 1.06 (?-?) B 117 mmol/L 0.998 -0.081 (?-?) 1.037 (?-?) C 75 1.000 0.179 (?-?) 0.996 (?-?) D 43 0.9977 -2.6 (?-?) 1.084 (?-?) E ? 0.999 0.68 (?-?) 0.99 (?-?) F 40 0.98 -3.14 (?-?) 0.98 (?-?) G 60 0.08 (?-?) 1.008 (?-?) No BA analysis No 95% CI for evaluation of bias

Interpretation of results To conclude Laboratory methods procedure Verification Data analysis Interpretation of results Clinically relevant criteria Linear regression analysis Bland-Altman plot Number of samples Measurement range Time of analysis Data analysis Data interpretation

Take a home massage Comparability of methods and analyzers Coefficient of correlation doesn’t allow conclusions about comparability of methods, but only about linear association between them, even when it is very high (close to 1) Regression equation: Y = 0.67 (-0.15-1.32) + 1.09 (1.03-1.22) x is an example of proportional bias between methods (95% CI for slope not including 1) without constant bias between methods (95% CI for intercept including 0) Regression equation for glucose concentration: Y = 0.07 (0.01-0.13) + 1.15 (0.85-1.23) x (mmol/L) is an example of statistically significant, but clinically non-significant constant bias. Value of 0.07 (0.01-0.13) mmol/L glucose is lower than conventional analytical performance of the test