Confocal Laser Scanning Microscopy: general considerations and techniques Simone Bossi.

Slides:



Advertisements
Similar presentations
Chapter 4 Notes Part II: Microscopy (refer to pg.60-61)
Advertisements

CELL BIOLOGY TECHNIQUES
Visualizing Prokaryote Cells Chapter 3 - Black. Light.
Lecture 11. Microscopy. Optical or light microscopy involves passing visible light transmitted through or reflected from the sample through a single or.
IPC Friedrich-Schiller-Universität Jena Contrast modes in light microscopy: Bright field.
Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. 1 The Dark-Field Microscope Image is formed by light reflected.
Microscopy Lecture I.
ERT107 MICROBIOLOGY FOR BIOPROCESS ENGINEERING Pn Syazni Zainul Kamal PPK Bioprocess.
Types of Light Microscopy Jenna Moranski. Compound Light Microscope What can be viewed Transparent samples Dead specimen Must be small enough to fit on.
1. Resolution (R) : separation of close objects, light wavelength NA, numerical aperture 2. Contrast : distinction of objects from background “light field”
Microscopy Boot Camp /08/25 Nikitchenko Maxim Baktash Babadi.
Fluorophores bound to the specimen surface and those in the surrounding medium exist in an equilibrium state. When these molecules are excited and detected.
USE AND CARE OF THE MICROSCOPE LECTURE 1. MICROSCOPY u Light Microscopy: any microscope that uses visible light to observe specimens u Compound Light.
Microscopy Techniques for Biomaterial Characterization: A Primer Prabhas V. Moghe Lecture 3 September 21, 1999 RU CBE 533 or BME 553; NJIT BME 698.
Study of Protein Association by Fluorescence-based Methods Kristin Michalski UWM RET Intern In association with Professor Vali Raicu.
Light Microscopy Sarah Heintz. Compound Microscope The microscope uses a lens that is close to the object and uses light to focus on the real image of.
Types of Microscopes Microscopes Rule!!!!!!!!!!. There are four basic kinds of microscopes: Optical (or light) Electron Scanning Probe Ion.
Methods, Part 2 February 9, Learning Outcomes Discriminate between different types of microscopy, and justify their use for answering research questions.
Microscope.
Microscopy.
Optical Microscopy Widefield Microscopy - Brightfield, Darkfield, DIC, Phase Contrast, Fluorescence … Total Internal Reflection (TIR and TIRF) Microscopy.
Zoology I Cytology, Embryology & Histology By Dr/ Alyaa Ragae Zoology Lecture Faculty of Oral and Dental Medicine Future University.
Microscopy. Scale Lenses and the Bending of Light light is refracted (bent) when passing from one medium to another refractive index –a measure of how.
Pages 52 to 54.  Compound Light  Visible light is used to illuminate the specimen  Glass lens bend the light to magnify the image  Magnifies up to.
Unit 4: Cells Microscopes.
By: Rob Page and Tara Trovarello
Using Nanotechnology in Medical Imaging and Diagnosis Alisha Shutler Introduction to Nanotechnology December 1, 2007.
Figure Molecular Biology of the Cell (© Garland Science 2008)
Advanced Biology Visualizing Cells. The Human Eye  Resolution – The minimum distance two points can be apart and still be distinguished as two separate.
IPC Friedrich-Schiller-Universität Jena 1 ASP_MP_S2j Biophotonics Prof. Dr. Rainer Heintzmann Institut für Physikalische Chemie Friedrich-Schiller-Universität.
Microscopes Compound Bright-Field Light Microscope
Tools of the Biologist Chapter 1 Section 1-4. Biology Tools Scientists use many tools in the laboratory and in the field. –Some are used for measuring.
Light Microscopy By: Nicole Sullivan.
Developments in Imaging Technology and Staining Techniques Unit C: Section 1.3 Science 10.
IPC Friedrich-Schiller-Universität Jena 1 ASP_MP_S2j Biophotonics Prof. Dr. Rainer Heintzmann Institut für Physikalische Chemie Friedrich-Schiller-Universität.
Fluorescence microscopy Principle and applications.
Microscopes. Micrographia Robert HookeRobert Hooke First report of cell structureFirst report of cell structure corkcork First illustrated book.
Molecular Cell Biology Light Microscopy in Cell Biology Cooper Modified from a 2010 lecture by Richard McIntosh, University of Colorado.
Manipulating DNA and RNA. DNA hybridization PCR.
Microscopy. Microscopy Techniques objective light source “transmitted”
Microscopes "The evolution of a science often parallels the invention of instruments that extend human senses to new limits." (Campbell 2002)
Chapter 1 Section 4 Tools and Procedures. Tools play a major role in science.
CHAPTER 1 The Science of Life. What is Biology?? The study of life Biologists study questions about how living things work, how they interact with the.
Imaging Technology and Staining Techniques CHAPTER 1.3.
Science 10 – Unit C BIOLOGY Chapter 1 – The Microscope.
-Microscopes- Types. Goals: 1. Check your proficiency 2. Develop proficiency 3. Proficiencies include:
Microscopy
microscopy There are three well-known branches of microscopy:
Microscopes are instruments designed to produce magnified visual or photographic images of small objects. The microscope must accomplish three tasks 1.Magnify.
Designing a Microscopy Experiment Kurt Thorn, PhD Director, Image from Susanne Rafelski, Marshall lab.
Imaging.
 Bright-field  Dark-field  Phase Contrast  Fluorescence.
Microscopy.
By c.Keerthana.  First described by Dutch physicist frits Zernike in  It is a type of light microscopy.  It is a contrast enhancing optical technique.
Topic 1 Microscopes and Microscopy. Light Microscopes  How do they work?  Optical magnification  Images pass through a lens or a series of lenses 
Last Class Isolation of cells Cell Fraction, Centrifuge Chromatography
Microscope.
Lasers and Confocal.
Laser Confocal Microscopy
Observing Microorganisms Through a Microscope
3.3 Other types of microscopy
Microscopes Orlando Science Center.
Observing Microorganisms Through a Microscope
The Study of Microbial Structure: Microscopy and Specimen Preparation
Concept: Cell Biology tools - microscopy & chemistry
LIGHT MICROSCOPY variations
Resolution of Microscope
Laboratory Exercise 2 “Microscopy”.
Observing Microorganisms Through a Microscope
Chapter 6 A Tour of the Cell
Presentation transcript:

Confocal Laser Scanning Microscopy: general considerations and techniques Simone Bossi

Optical Microscopy Optical or light microscopy involves passing visible light transmitted through or reflected from the sample through a single or multiple lenses to allow a magnified view of the sample. The resulting image can be detected directly by the eye, imaged on a photographic plate or captured digitally.

Optical microscopy techniques Bright field optical microscopy Oblique illumination Dark field optical microscopy Phase contrast optical microscopy Differential interference contrast microscopy Fluorescence microscopy Confocal laser scanning microscopy

Confocal laser scanning microscopy (CLSM) is a relatively new light microscopical imaging technique (introduced around 1980 by M. Petran and A. Boyde) which has found wide applications in the biological sciences [c.f. Pawley,1990; Boyde, 1994]. The primary value of the CLSM to the biologist is its ability to produce optical sections through a 3- dimensional (3-D) specimen - e.g., an entire cell or a piece of tissue - that, to a good approximation, contain information from only one focal plane.

LASER: Light Amplification by the Stimulated Emission of Radiation

The Optic path

3D Reconstruction

3D reconstruction

Auto fluorescence

Fluorescent Probe Perfusion

The fluorescent probe FLUO4-AM

Sub localisation

Quantisation of fluorescence

GFP: Green Fluorescent Protein

GFP Fusion Protein

Amy Palmer in the Tsien laboratory started with the original cameleon construct — two fluorescent proteins (cyan fluorescent protein (CFP) and citrine) separated by calmodulin (CaM) and a CaM-binding peptide. In the presence of Ca2+, CaM interacts with the CaM-binding peptide, and CFP emission decreases as citrine emission increases, which is indicative of increased fluorescence resonance energy transfer (FRET). Cameleon Construct