Cape Sable Seaside Sparrow Spatially Explicit Individual Based Population Model (SIMSPAR) Model developed by M. Philip Nott, University of Tennessee (now.

Slides:



Advertisements
Similar presentations
Running a model's adjoint to obtain derivatives, while more efficient and accurate than other methods, such as the finite difference method, is a computationally.
Advertisements

Agent-based Modeling: A Brief Introduction Louis J. Gross The Institute for Environmental Modeling Departments of Ecology and Evolutionary Biology and.
ATLSS and Uncertainty: relativity and spatially-explicit ecological models as methods to aid management planning in Everglades restoration Louis J. Gross,
Sensitivity Analysis of a Spatially Explicit Fish Population Model Applied to Everglades Restoration Ren é A. Salinas and Louis J. Gross The Institute.
ATLSS Fish Functional Group Dynamics Model ALFISH Holly Gaff, Rene’ Salinas, Louis Gross, Don DeAngelis, Joel Trexler, Bill Loftus and John Chick.
The ATLSS High Resolution Topography/Hydrology Model Scott M. Duke-Sylvester ATLSS Project : University of Tennessee Project web-site : .
Konza Prairie Long-Term Ecological Research Station Tall Grass Prairie Ecosystem.
The Challenge. Discussion Questions What are key topics on vegetation/climate relationships that are best approached with simulation modeling? What types.
ESTIMATING THE 100-YEAR FLOOD FORDECORAH USING THE RAINFALL EVENTS OF THE RIVER'S CATCHMENT By Kai TsurutaFaculty Advisor: Richard Bernatz Abstract:This.
Nidal Salim, Walter Wildi Institute F.-A. Forel, University of Geneva, Switzerland Impact of global climate change on water resources in the Israeli, Jordanian.
Landslide Susceptibility Mapping to Inform Land-use Management Decisions in an Altered Climate Muhammad Barik and Jennifer Adam Washington State University,
Habitat Reserves 1.What are they? 2.Why do we need them? 3.How do we design them?
Dennis P. Lettenmaier Alan F. Hamlet JISAO Center for Science in the Earth System Climate Impacts Group and Department of Civil and Environmental Engineering.
A Parallel Structured Ecological Model for High End Shared Memory Computers Dali Wang Department of Computer Science, University of Tennessee, Knoxville.
ALFISHES: A Size-structured and Spatially-explicit Model for Predicting the Impact of Hydrology on the Resident Fishes of the Everglades Mangrove Zone.
Kelp-Sea Urchin-Fishermen: a Spatially Explicit Individual-Based Model Nicolas Gutierrez and Ray Hilborn School of Aquatic and Fishery Sciences University.
Abstract The ATLSS (Across Trophic Level System Simulation) hierarchy of models is designed to utilize varying levels of detail and data availability to.
Models for the masses: bringing computational resources for addressing complex ecological problems to stakeholders Louis J. Gross, Eric Carr and Mark.
ATLSS SESI MODEL: Long-Legged and Short-Legged Wading Birds: Foraging Indices Louis J. Gross, University of Tennessee Provides a relative estimate of quality.
Analyses of Rainfall Hydrology and Water Resources RG744
Modeling Effects of Anthropogenic Impact and Climate in the Distribution of Threatened and Endangered Species in Florida Background Protection of natural.
CARPE DIEM Centre for Water Resources Research NUID-UCD Contribution to Area-3 Dusseldorf meeting 26th to 28th May 2003.
An Analysis of the Pollutant Loads and Hydrological Condition for Water Quality Improvement for the Weihe River For implementing water resources management.
Population Biology: PVA & Assessment Mon. Mar. 14
OPTIMAL STRATEGIES FOR ECOLOGICAL RESTORATION UNDER CLIMATE CHANGE Koel Ghosh, James S. Shortle, and Carl Hershner * Agricultural Economics and Rural Sociology,
Abstract The ATLSS (Across Trophic Level System Simulation) hierarchy of models is designed to utilize varying levels of detail and data availability to.
Since 1993, have there been changes in Great Lakes Piping Plover reproductive phenology? Since 1993, have there been climate-induced changes in Great Lakes.
Please note: this presentation has not received Director’s approval and is subject to revision.
A process-based, terrestrial biosphere model of ecosystem dynamics (Hybrid v. 3.0) A. D. Friend, A.K. Stevens, R.G. Knox, M.G.R. Cannell. Ecological Modelling.
GHP and Extremes. GHP SCIENCE ISSUES 1995 How do water and energy processes operate over different land areas? Sub-Issues include: What is the relative.
Space, Relativity, and Uncertainty in Ecosystem Assessment of Everglades Restoration Scenarios Michael M. Fuller, Louis J. Gross, Scott M. Duke-Sylvester,
STRATIFICATION PLOT PLACEMENT CONTROLS Strategy for Monitoring Post-fire Rehabilitation Treatments Troy Wirth and David Pyke USGS – Biological Resources.
Models in GIS A model is a description of reality It may be: Dynamic orStatic Dynamic spatial models e.g., hydrologic flow Static spatial models (or point.
Effects of Selected Forest Management Practices on Forest Birds in Missouri Oak-Hickory Forests.
ATLSS Models for Predicting the Impact of Hydrology on Wildlife Populations in the Everglades Mangrove Zone of Florida Bay Jon Cline University of Tennessee.
Natural Disturbance and Environmental Assessments in the Oil Sands Region Linda Halsey April 2012.
Soil Movement in West Virginia Watersheds A GIS Assessment Greg Hamons Dr. Michael Strager Dr. Jingxin Wang.
ATLSS Spatially Explicit Species Index (SESI) Models E. Jane Comiskey, Mark R. Palmer Donald L. DeAngelis, Louis J. Gross.
PCB 3043L - General Ecology Data Analysis. OUTLINE Organizing an ecological study Basic sampling terminology Statistical analysis of data –Why use statistics?
The ATLSS Vegetative Succession Model Scott M. Duke-Sylvester ATLSS Project : University of Tennessee Project web-site : .
Integrated Ecological Assessment February 28, 2006 Long-Term Plan Annual Update Carl Fitz Recovery Model Development and.
Pattern Oriented Modeling (POM) for Indirect Estimation of Helper & Floater Dispersal Behavior on Camp Lejeune Individual-based, spatially-explicit population.
Background knowledge expected Population growth models/equations exponential and geometric logistic Refer to 204 or 304 notes Molles Ecology Ch’s 10 and.
Spatial distribution of snow water equivalent across the central and southern Sierra Nevada Roger Bales, Robert Rice, Xiande Meng Sierra Nevada Research.
Please note: this presentation has not received Director’s approval and is subject to revision.
A Spatially Explicit Individual-based forest simulator Grégoire Vincent *, Luc Veillon and Hubert de Foresta Overview Individual trees of different species.
P. 221 Molles Investigating Distributions. Populations I. Demography Defining populations Distribution Counting populations (size/density) Age structure.
Goal: to understand carbon dynamics in montane forest regions by developing new methods for estimating carbon exchange at local to regional scales. Activities:
Parallel Landscape Fish Model for South Florida Ecosystem Simulation Dali Wang 1, Michael W. Berry 2, Eric A. Carr 1, Louis J. Gross 1 The ATLSS Hierarchy.
PCB 3043L - General Ecology Data Analysis.
Introduction to Models Lecture 8 February 22, 2005.
Ecological Sites on Rangeland. A0po&list=PL7CD3CD7A9350A858.
Results from the Downscaling Needs Assessment Survey April 2011 Sarah Trainor Courtesy of Tony Weyiouanna Sr. & Dave Atkinson.
Impacts of Landuse Management and Climate Change on Landslides Susceptibility over the Olympic Peninsula of Washington State Muhammad Barik and Jennifer.
Why use landscape models?  Models allow us to generate and test hypotheses on systems Collect data, construct model based on assumptions, observe behavior.
Citation: Kato, A.., L. M. Moskal., P. Schiess, M. Swanson, D. Calhoun and W. Stuetzel, LiDAR based tree crown surface reconstruction. Factsheet.
What do we know about the effects of stage on wading bird nesting at Lake Okeechobee? Dale E. Gawlik Collaborators: Jennifer Chastant, FAU David Essian,
Comparison of Odonata Populations in Natural and Constructed Emergent Wetlands in the Bluegrass Region of Kentucky Introduction Wetlands provide valuable.
Arctic RIMS & WALE (Regional, Integrated Hydrological Monitoring System & Western Arctic Linkage Experiment) John Kimball FaithAnn Heinsch Steve Running.
Wading Bird Habitat Suitability:
Ecosystem Model Evaluation
Across Trophic Level System Simulation
How can the science of ecological modeling be used as a management tool in assessing the relative impact of alternative hydrology scenarios on populations.
Foundations of Spatially Explicit Species Index Models
Change in Flood Risk across Canada under Changing Climate
PCB 3043L - General Ecology Data Analysis.
Across Trophic Level System Simulation (ATLSS)
Considerations in Using Climate Change Information in Hydrologic Models and Water Resources Assessments JISAO Center for Science in the Earth System Climate.
ATLSS SESI Models Implement and Execute the Models for a Hydrology Scenario Objectives: Integrate SESI components into a cohesive computational framework.
Department of Computer Science, University of Tennessee, Knoxville
Presentation transcript:

Cape Sable Seaside Sparrow Spatially Explicit Individual Based Population Model (SIMSPAR) Model developed by M. Philip Nott, University of Tennessee (now at Institute for Bird Populations) for the ATLSS Program. U. S. Geological Survey, Florida Caribbean Science Center Program website: atlss.org (for full documentation) U.S. Department of the Interior U.S. Geological Survey

Cape Sable Seaside Sparrow Breeds in marl prairies of Everglades Dry season breeder, generally when water is below ground surface Flooding late in the wet season delays reproduction Flooding during nesting will cause nest abandonment Dispersal is limited There has been an approximately 90% reduction in numbers in the “western” region since 1993

Extent of sparrow’s geographic range Inhabits the seasonally flooded marl prairies of southern Florida currently dominated by graminoids Preferred breeding habitat type is open prairie devoid of trees and shrubs that occurs between marsh and scrub / forest habitats Population can be divided into three distinct sub-populations (western, core and eastern) Sparrow breeding habitat is sensitive to hydrology (and fire)

Sparrow Reproductive Behavior and Landscape Hydrology The timing and amplitude of daily flooding events may affect the spatial extent and level of breeding success The figure on the left shows relative elevations in the “western” Cape Sable seaside sparrow breeding area. The area is available for breeding only when it is not flooded. The next figure shows the availability of breeding area for different years (red represents dry area for 6 months - good for breeding). x x High elevation refugia x

Identification of habitat preferences This shows the vegetation types in the “western” habitat area of the Cape Sable seaside sparrow. The grid cells are 500 x 500 m. The sparrow utilizes cells for nesting territories that have a large enough fraction of Muhlenbergia grass and sparse Cladium. Areas with trees or other woody vegetation are avoided. The SESI model, combining vegetation type with hydrology, is shown next.

Cape Sable seaside sparrow SESI model The SESI model combines the following for each spatial cell: Cape Sable sparrow nesting habitat (vegetation type) preferences for each cell, classified by suitability value, depending on the percentage of preferred vegetation in the cell. Dependence on water levels for each spatial cell through the reproductive season, where each cell can potentially have 0, 1, or 2 complete 45-day breeding cycles between January 1 and June 30. Flooding events, which can cause nesting delay or failure. Hydrologic model output determines the potential breeding period for a given year and water regulation scenario for each cell.

Cape Sable Seaside Sparrow Breeding Potential

Population Demography Model for Cape Sable Sparrow Population Dynamics The SESI model leaves out population dynamics. This limits what it can tell us, because the model does not project population numbers, age structure, spatial patterns, etc., through time. the physiological, behavioral, and life cycle characteristics of the species are left out. demographic stochasticity is not considered. therefore, population viability analysis requires a different modeling approach.

Population Demography Model for Cape Sable Sparrow Population Dynamics To develop the capability of simulating the population through time, a population demographic model was developed. The Cape Sable seaside sparrow simulation model (SIMSPAR) developed by Phil Nott, is a spatially explicit individual-based model, that allows population dynamics to be projected.

ATLSS Representation of Everglades Landscape Like other ATLSS models, SIMSPAR uses: spatially explicit topographic information vegetation data (30 x 30 m pixels), based on FGAP hydrologic data (daily water levels from SFWMM, refined to 500 x 500 m)

ATLSS Representation of Landscape Hydrology Why 500 x 500 meter cells? The Cape Sable seaside sparrow responds to relatively small spatial areas of available territory, forming clusters of several pairs on areas of the order of 500 x 500 meters. will not nest within a couple of hundred meters of trees, which is not easy to include as a rule in a grid with resolution coarser than 500 x 500 meters.

How SIMSPAR and other population demography models were developed Use of spatially explicit individual-based modeling In these models, each individual in a population is simulated through its lifetime on a spatially explicit landscape. The large amount of relevant empirical life cycle and behavioral data that are available can be included in such models. An advantage is that the effects of behavior and of fine resolution environmental variability can be taken into consideration.

Constructing SIMSPAR SIMSPAR High- resolution topography High- Long-term hydrological sequences High- resolution topography High- resolution vegetation layer SIMSPAR predictions Life cycle, demographic and behavioral parameters (e.g. mortality) derived from field studies : Bass, Curnutt, Lockwood, Mayer & Pimm

SIMSPAR Flow Diagram

Spatially Explicit Individual-Based Model for the Cape Sable Seaside Sparrow The next slides show output from SIMSPAR: simulated conditions within the “western” Cape Sable sparrow breeding area within a given year projected spatial distribution of nest initiations and success within a given year projected population over a multi-year period, given historical rainfall and water regulation patterns

Fledgling Productivity Maps Projected Population Size

Calibration/Evaluation of SIMSPAR SIMSPAR has been calibrated and evaluated for the ‘western’ subpopulation of the Cape Sable seaside sparrow. The number of singing males counted in 1981 was used to set the initial number of sparrows in 1977. Numbers of singing males in 1992-1997, used for evaluation, were in good agreement with model projections.

SimSpar Evaluation Run

Further Analyses with the SEIB Models In addition to providing output for application to evaluation, the SEIB models are being used in other ways. Sensitivity analysis is showing the behavioral and environmental factors that the population is most sensitive to. The models can aid in determining appropriate monitoring procedures and interpreting monitoring data.

The importance of sensitivity and uncertainty analysis The effect of uncertainties is being studied for all ATLSS models Sensitivity analysis has been performed on the Cape Sable seaside sparrow demographic model (SIMSPAR) with respect to all important model parameters.

Sensitivity Analysis for SIMSPAR Changes in both average population size and coefficient of variance have been examined with respect to all important parameters, leading to results Population highly sensitive to changes in overall water level Population highly sensitive to habitat degradation realistic loss of habitat has more severe effects than random loss loss of whole cells has greater effect than equivalent deterioration of all cells Cape Sable sparrow population decrease is greater than proportionate with habitat deterioration Males could compensate to some extent for habitat loss by greater dispersal abilities Female ability to find males with territories also a sensitive parameter in the model.

Some sensitivities examined What will the effects of sea level changes and altered water management be on vegetation and sparrow breeding success? How extensive is shrub invasion of marl prairie at higher elevations and what are the expected effects on sparrow populations?

The importance of modeling in support of monitoring Predictive modeling “focuses data collection on non-trivial components” - Kevin Rogers (in Pickett, Ostfeld, Shackak, and Likens, 1997) Example - sensitivity analysis of SIMSPAR Allows us to relate what is measured to variables that we want to know Example - virtual helicopter survey applied in SIMSPAR Allows us to analyze and interpret monitoring data.

The importance of modeling in support of monitoring Example - Virtual helicopter survey in SIMSPAR Modeling allows us to relate what we can measure to what we want to measure, although these may be related in a complex way. Because SIMSPAR is spatially explicit and individual-based, it is possible to simulate the sparrow counts This is done by using a ‘virtual helicopter’, which follows the precise schedule of the real helicopter survey. The virtual helicopter records singing males only at sites where water levels are low, there are territories, and according to a probability Thus the model can follow the pattern of singing males, as well as the total population, thus internally calculating their ratio.

Status of SIMSPAR The spatially explicit, individual-based model of the Cape Sable seaside sparrow was developed by Nott (1998), see also Elderd and Nott (submitted). The original MatLab version of the model was delivered to ENP in 1998. A more efficient version of the model is now available.

Future Plans Work is underway to further evaluate SIMSPAR using nesting success data (data provided by Julie Lockwood). In particular, we will see how precisely SIMSPAR can predict the spatial and temporal patterns of nest initiation and success.