Chromatin Starts to Come Clean

Slides:



Advertisements
Similar presentations
Structure of a Ubiquitin E1-E2 Complex: Insights to E1-E2 Thioester Transfer Shaun K. Olsen, Christopher D. Lima Molecular Cell Volume 49, Issue 5, Pages.
Advertisements

How T Cells Earn the Follicular Rite of Passage Carola G. Vinuesa, Jason G. Cyster Immunity Volume 35, Issue 5, Pages (November 2011) DOI: /j.immuni
HnRNP L and HnRNP A1 Induce Extended U1 snRNA Interactions with an Exon to Repress Spliceosome Assembly Ni-Ting Chiou, Ganesh Shankarling, Kristen W. Lynch.
Individualized Medicine from Prewomb to Tomb Eric J. Topol Cell Volume 157, Issue 1, Pages (March 2014) DOI: /j.cell Copyright.
Mechanistic Insight into Site-Restricted Monoubiquitination of FANCD2 by Ube2t, FANCL, and FANCI Arno F. Alpi, Paul E. Pace, M. Madan Babu, Ketan J. Patel.
Bleach Activates a Redox-Regulated Chaperone by Oxidative Protein Unfolding J. Winter, M. Ilbert, P.C.F. Graf, D. Özcelik, U. Jakob Cell Volume 135, Issue.
What We Talk About When We Talk About Fat Evan D. Rosen, Bruce M. Spiegelman Cell Volume 156, Issue 1, Pages (January 2014) DOI: /j.cell
An Ancient Mechanism for Splicing Control: U11 snRNP as an Activator of Alternative Splicing Jens Verbeeren, Elina H. Niemelä, Janne J. Turunen, Cindy.
Maintaining Cell Identity through Global Control of Genomic Organization Gioacchino Natoli Immunity Volume 33, Issue 1, Pages (July 2010) DOI: /j.immuni
Making Proteins in the Powerhouse B. Martin Hällberg, Nils-Göran Larsson Cell Metabolism Volume 20, Issue 2, Pages (August 2014) DOI: /j.cmet
The Pathobiology of Vascular Dementia Costantino Iadecola Neuron Volume 80, Issue 4, Pages (November 2013) DOI: /j.neuron Copyright.
Cost of Unneeded Proteins in E. coli Is Reduced after Several Generations in Exponential Growth Irit Shachrai, Alon Zaslaver, Uri Alon, Erez Dekel Molecular.
Eph-Ephrin Bidirectional Signaling in Physiology and Disease Elena B. Pasquale Cell Volume 133, Issue 1, Pages (April 2008) DOI: /j.cell
Cyclic di-GMP Sensing via the Innate Immune Signaling Protein STING Qian Yin, Yuan Tian, Venkataraman Kabaleeswaran, Xiaomo Jiang, Daqi Tu, Michael J.
Telomeric Noncoding RNA TERRA Is Induced by Telomere Shortening to Nucleate Telomerase Molecules at Short Telomeres Emilio Cusanelli, Carmina Angelica.
The Landscape of Microsatellite Instability in Colorectal and Endometrial Cancer Genomes Tae-Min Kim, Peter W. Laird, Peter J. Park Cell Volume 155, Issue.
Human Brown Adipose Tissue Sven Enerbäck Cell Metabolism Volume 11, Issue 4, Pages (April 2010) DOI: /j.cmet Copyright © 2010.
Interplay between HDAC3 and WDR5 Is Essential for Hypoxia-Induced Epithelial- Mesenchymal Transition Min-Zu Wu, Ya-Ping Tsai, Muh-Hwa Yang, Chi-Hung Huang,
The BCL-2 Family Reunion Jerry E. Chipuk, Tudor Moldoveanu, Fabien Llambi, Melissa J. Parsons, Douglas R. Green Molecular Cell Volume 37, Issue 3, Pages.
The Mitochondrial Basis of Aging Nuo Sun, Richard J. Youle, Toren Finkel Molecular Cell Volume 61, Issue 5, Pages (March 2016) DOI: /j.molcel
E3-Independent Monoubiquitination of Ubiquitin-Binding Proteins Daniela Hoeller, Christina-Maria Hecker, Sebastian Wagner, Vladimir Rogov, Volker Dötsch,
Quantitative Single-Cell Approaches to Stem Cell Research Martin Etzrodt, Max Endele, Timm Schroeder Cell Stem Cell Volume 15, Issue 5, Pages (November.
Central Dogma Goes Digital
ADPr-ChAP: Mapping ADP-Ribosylation onto the Genome
Volume 28, Issue 4, Pages (November 2007)
Inter-chromosomal Contact Properties in Live-Cell Imaging and in Hi-C
Volume 49, Issue 1, Pages 3-5 (January 2013)
ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters
The DNA Damage Response: Ten Years After
Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA  Mijeong Kang, Robert.
Personalized Disease Models on a Chip
Skill Development in Graduate Education
Claudia Sala, David C. Grainger, Stewart T. Cole  Cell Host & Microbe 
The Case of the Disappearing Drug Target
More Division of Labor at the Eukaryotic Replication Fork
How To Choose a Good Scientific Problem
A New Link in the Chain from Amino Acids to mTORC1 Activation
Volume 46, Issue 5, Pages (June 2012)
From Protein-RNA Predictions toward a Peptide-RNA Code
Joseph W. Briggs, Jonathan D. Dinman  Molecular Cell 
Eukaryotic Transcription Activation: Right on Target
Joseph W. Briggs, Jonathan D. Dinman  Molecular Cell 
An Argonaute Protein Directs Nuclear Xrn2 Function
Personalized Disease Models on a Chip
MicroRNAs and Viral Infection
Drugging Chromatin in Cancer: Recent Advances and Novel Approaches
Mitotic Chromosomes: Not So Silent After All
What Determines the Specificity and Outcomes of Ubiquitin Signaling?
Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA  Mijeong Kang, Robert.
Ramiro E. Verdun, Laure Crabbe, Candy Haggblom, Jan Karlseder 
Reconsidering DNA Polymerases at the Replication Fork in Eukaryotes
Volume 69, Issue 3, Pages (February 2018)
Volume 64, Issue 3, Pages (November 2016)
Length Matters: MINDY Is a New Deubiquitinase Family that Preferentially Cleaves Long Polyubiquitin Chains  Till Maurer, Ingrid E. Wertz  Molecular Cell 
Crossing the Exon Molecular Cell
Molecular Mechanisms of Long Noncoding RNAs
Barrier Function at HMR
A Ubiquitin Replacement Strategy in Human Cells Reveals Distinct Mechanisms of IKK Activation by TNFα and IL-1β  Ming Xu, Brian Skaug, Wenwen Zeng, Zhijian.
Amanda O'Donnell, Shen-Hsi Yang, Andrew D. Sharrocks  Molecular Cell 
Volume 5, Issue 4, Pages (October 2017)
ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters
The DNA Damage Response: Ten Years After
How To Choose a Good Scientific Problem
Volume 163, Issue 4, (November 2015)
Chaos Controlled: Discovery of a Powerful Amyloid Inhibitor
S-Nitrosylation at the Interface of Autophagy and Disease
Volume 25, Issue 2, Pages (January 2007)
Navigating the Deubiquitinating Proteome with a CompPASS
53BP1 Goes Back to Its p53 Roots
Targeting Protein Stability with a Small Molecule
Presentation transcript:

Chromatin Starts to Come Clean Shengjiang Tu, Gary LeRoy, Danny Reinberg  Molecular Cell  Volume 64, Issue 3, Pages 439-441 (November 2016) DOI: 10.1016/j.molcel.2016.10.022 Copyright © 2016 Elsevier Inc. Terms and Conditions

Figure 1 Schematic Diagram of ChIP-SICAP (A) Formaldehyde cross-linked sheared chromatin prepared from cells. (B) Immunoprecipitation of nucleosomal chains and associated proteins with antibody specific to target protein. (C) Wash immunoprecipitate followed by addition of Biotin-ddUTP by TdT. (D) Precipitate with Strepavidin beads. (E) Successive stringent washes followed by elution and reversal of cross-links. (F) Proteins are trypsinized and analyzed by quantitative mass spectrometry. Molecular Cell 2016 64, 439-441DOI: (10.1016/j.molcel.2016.10.022) Copyright © 2016 Elsevier Inc. Terms and Conditions