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How Are Genes & Proteins Related?

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Presentation on theme: "How Are Genes & Proteins Related?"— Presentation transcript:

1 How Are Genes & Proteins Related?
GENETIC INFO: DNA’s Nucleotide Sequence EXPRESSED AS: Protein’s Amino Acid Sequence AN EXAMPLE: 2 DNA Base Sequences GTG CAC CTG ACT CCT GAG GAG normal Hb GTG CAC CTG ACT CCT GTG GAG sickle Hb Cell Movies 102/SikldCellsInCapQTmovie Copyright © 2005 Pearson Prentice Hall, Inc.

2 THE CENTRAL DOGMA: DNA RNA PROTEIN
transcription rRNA + proteins mRNA tRNA ribosomes tRNA amino acids translation Figure :10-8 Title: An overview of information flow in a cell, from gene transcription to chemical reactions catalyzed by enzymes Caption: modification degradation Copyright © 2005 Pearson Prentice Hall, Inc.

3 gene DNA (nucleus) (cytoplasm) Transcription messenger RNA Translation
Figure :10-3 Title: Genetic information flows from DNA to RNA to protein Caption: (a) During transcription, the nucleotide sequence in a gene specifies the nucleotide sequence in a complementary RNA molecule. For protein-encoding genes, the product is an mRNA molecule that exits from the nucleus and enters the cytoplasm. (b) During translation, the sequence in an mRNA molecule specifies the amino acid sequence in a protein. Translation protein

4 THE CENTRAL DOGMA: DNA RNA PROTEIN
transcription rRNA + proteins mRNA tRNA ribosomes tRNA amino acids translation Figure :10-8 Title: An overview of information flow in a cell, from gene transcription to chemical reactions catalyzed by enzymes Caption: modification degradation Copyright © 2005 Pearson Prentice Hall, Inc.

5 How Are Genes & Proteins Related?
Genetic Information Is Transcribed into RNA Then Translated into Protein Genetic info: from DNA to RNA to protein (F10.3 p. 166) Processes Involved in the Use and Inheritance of Genetic Information (T10.2 p. 167) Copyright © 2005 Pearson Prentice Hall, Inc.

6 Figure :10-T2 Title: Processes Involved in the Use and Inheritance of Genetic Information Caption:

7 How Are Genes & Proteins Related?
DNA’s Nucleotide Sequence Expressed as Protein’s Amino Acid Sequence Most Genes Contain the Information for the Synthesis of a Single Protein DNA Provides Instructions for Protein Synthesis via RNA Intermediaries DNA & RNA Comparison (T10.1 p. 165) Cells make 3 major types of RNA (F10.2 p. 166) Copyright © 2005 Pearson Prentice Hall, Inc.

8 Figure :10-T1 Title: A Comparison of DNA and RNA Caption:

9 Transcription Transcription: (F10.4 p. 168) Initiation: Elongation:
RNA synthesis from DNA instructions 3 Steps Initiation: RNA Polymerase Binds to the Promoter of a Gene Elongation: Proceeds Until RNA Polymerase Reaches a Termination Signal Termination: RNA Polymerase “Falls Off” the DNA Transcription in Action (F10.5 p. 169) Copyright © 2005 Pearson Prentice Hall, Inc.

10 DNA gene 1 gene 2 gene 3 RNA polymerase DNA RNA DNA template strand
Initiation RNA polymerase DNA RNA polymerase binds to the promoter region of DNA near the beginning of a gene, separating the double helix near the promoter. Elongation RNA DNA template strand RNA polymerase travels along the DNA template strand, catalyzing the addition of ribose nucleotides into an RNA molecule. The nucleotides in the RNA are complementary to the template strand of the DNA. Termination Figure :10-4 Title: Transcription is the synthesis of RNA from instructions in DNA Caption: A gene is a segment of a chromosome's DNA. One of the DNA strands will serve as the template for the synthesis of an RNA molecule with bases complementary to the bases in the DNA strand. Question If the other DNA strand of this molecule were the template strand, in which direction would the RNA polymerase travel? At the end of a gene, RNA polymerase encounters a sequence of DNA called a termination signal. RNA polymerase detaches from the DNA and releases the RNA molecule. Conclusion of transcription RNA After termination, the DNA completely rewinds into a double helix. The RNA molecule is free to move from the nucleus to the cytoplasm for translation, and RNA polymerase may move to another gene and begin transcription once again.

11 gene RNA molecules DNA Figure :10-5 Title: RNA transcription in action
Caption: This electron micrograph shows the progress of RNA transcription in the egg of an African clawed toad. In each treelike structure, the central "trunk" is DNA and the "branches" are RNA molecules. A series of RNA polymerase molecules are traveling down the DNA, synthesizing RNA as they go. The beginning of the gene is on the left. The short RNA molecules on the left have just begun to be synthesized; the long RNA molecules on the right are almost finished. DNA

12 Translation The Process of Protein Synthesis mRNA: Ribosomes : tRNA:
mRNA Base Sequence into Protein Amino Acid Sequence (F10.6 p. 171) mRNA: Carries Information for Protein Synthesis from the Nucleus to the Cytoplasm Ribosomes : “Dumb” Workbench Where Amino Acids Are Hooked Together 2 Subunits, Each Composed of rRNA & Protein tRNA: Decodes mRNA Base Sequence into Protein Amino Acid Sequence Complementary Base Pairing of tRNA Anticodon to mRNA Codon The Genetic Code (Codons of mRNA) (T10.3 p. 167) Copyright © 2005 Pearson Prentice Hall, Inc.

13 Messenger RNA (mRNA) Ribosome: contains ribosomal RNA (rRNA)
catalytic site large subunit 1 2 tRNA/amino acid binding sites small subunit Figure :10-2 Title: Cells synthesize three major types of RNA Caption: Transfer RNA (tRNA) attached amino acid anticodon

14 mRNA ribosomes F5.7 P85 0.05 micrometers
Figure :5-7 Title: Ribosomes Caption: Ribosomes may be found free in the cytoplasm either singly or strung along messenger RNA molecules as they participate in protein synthesis. Ribosomes also stud the rough endoplasmic reticulum, giving it a rough appearance and allowing the synthesis of proteins within the ER. ribosomes F5.7 P85 0.05 micrometers Copyright © 2005 Pearson Prentice Hall, Inc.

15 DNA mRNA tRNA protein gene etc. complementary DNA strand template DNA
codons mRNA etc. Figure :10-7 Title: Complementary base pairing is critical to decode genetic information Caption: (a) DNA contains two strands: the template strand is used by RNA polymerase to synthesize an RNA molecule. (b) Bases in the template strand of DNA are transcribed into a complementary mRNA. Codons are sequences of three bases that specify an amino acid or a stop during protein synthesis. (c) Unless it is a stop codon, each mRNA codon forms base pairs with the anticodon of a tRNA molecule that carries a specific amino acid. (d) The amino acids borne by the tRNAs are joined together to form a protein. anticodons tRNA etc. amino acids protein etc.

16 Figure :10-T3 Title: The Genetic Code (Codons of mRNA) Caption:

17 Translation Translation: ACTIVITY Initiation: Elongation :
Protein Synthesis from mRNA Information 3 steps Initiation: mRNA & tRNA Bind to a Ribosome Elongation : tRNA Anticodons Form Complementary Base Pairs to mRNA Anticodons tRNA Brings In Next Amino Acid rRNA Transfers This Amino Acid from tRNA to Growing Amino Acid Polymer Protein Synthesis Proceeds One Amino Acid at a Time Until …………….. Termination: A Stop Codon Is Reached mRNA & Ribosome Fall Apart Completed Protein is Released Copyright © 2005 Pearson Prentice Hall, Inc.

18 Translation is the process of protein synthesis
Initiation: amino acid second tRNA binding site catalytic site tRNA methionine tRNA first tRNA binding site large ribosomal subunit initiation complex mRNA small ribosomal subunit A tRNA with an attached methionine amino acid binds to a small ribosomal subunit, forming an initiation complex The initiation complex binds to an mRNA molecule. The methionine (met) tRNA anticodon (UAC) base-pairs with the start codon (AUG) of the mRNA. The large ribosomal subunit binds to the small subunit. The methionine tRNA binds to the first tRNA site on the large subunit. Elongation: catalytic site catalytic site initiator tRNA detaches peptide bond ribosome moves one codon to right The second codon of mRNA (GUU) base-pairs with the anticodon (CAA) of a second tRNA carrying the amino acid valine (val). This tRNA binds to the second tRNA site on the large subunit. The catalytic site on the large subunit catalyzes the formation of a peptide bond linking the amino acids methionine and valine. The two amino acids are now attached to the tRNA in the second binding position. The "empty" tRNA is released and the ribosome moves down the mRNA, one codon to the right. The tRNA that is attached to the two amino acids is now in the first tRNA binding site and the second tRNA binding site is empty. Figure :10-6 Title: Translation is the process of protein synthesis Caption: Protein synthesis, or translation, decodes the base sequence of an mRNA into the amino acid sequence of a protein. Question Examine panel (i) above. If mutations changed all of the guanine molecules visible in the mRNA sequence shown here to uracil, how would translated peptide differ from the one shown? Termination: catalytic site completed peptide stop codon The third codon of mRNA (CAU) base-pairs with the anticodon (GUA) of a tRNA carrying the amino acid histidine (his). This tRNA enters the second tRNA binding site on the large subunit. The catalytic site forms a new peptide bond between valine and histidine. A three-amino-acid chain is now attached to the tRNA in the second binding site. The tRNA in the first site leaves, and the ribosome moves one codon over on the mRNA. This process repeats until a stop codon is reached; the mRNA and the completed peptide are released from the ribosome, and the subunits separate.

19 THE CENTRAL DOGMA IN ACTION
Recap: Convert DNA Base Sequence mRNA Base Sequence into Protein Amino Acid Sequence 2 Processes: Transcription & Translation Complementary Base Pairing: Critical to Decode Genetic Information (F10.7 p. 172) Occurs Twice Transcription: DNA Base Sequence Converted to mRNA Base Sequence Translation: mRNA Codons Match to tRNA Anticodons Copyright © 2005 Pearson Prentice Hall, Inc.

20 Mutations: What They Are & How They Affect Gene Function
Mutation = A Change in DNA Base Sequence Nucleotide Substitutions, Insertions, or Deletions External Agents – Chemicals, Radiation Uncorrected Replication Errors “Jumping Genes” Burkitt’s Lymphoma May Affect Protein Structure & Function Sickle Cell Anemia = 1 BP Mutation in Hemoglobin Gene (T10.4 p. 173) GTG CAC CTG ACT CCT GAG GAG normal Hb GTG CAC CTG ACT CCT GTG GAG sickle Hb Copyright © 2005 Pearson Prentice Hall, Inc.

21 Figure :10-T4 Title: Effects of Mutations in the Hemoglobin Gene Caption:

22 Mutations: What They Are & How They Affect Gene Function
Mutations: Provide Variability for Evolution Copyright © 2005 Pearson Prentice Hall, Inc.

23 Figure 21.13  Homeotic mutations and abnormal pattern formation in Drosophila
Copyright © 2005 Pearson Prentice Hall, Inc.

24 Figure 21.x5 Normal and double winged Drosophila
Copyright © 2005 Pearson Prentice Hall, Inc.

25 Regulation of Gene Expression
Critical for an Organism’s Development & Health Eukaryotic Cells May Regulate the Transcription of Individual Genes, Regions of Chromosomes, or Entire Chromosomes Regulatory Proteins: Bind to Gene’s Promoter Alter the Transcription of Individual Genes Some Regions of Chromosomes Are Condensed & Not Transcribed Entire Chromosomes May Be Inactivated, Preventing Transcription Barr bodies (F10.9 p. 177) X chromosome inactivation (F10.10 p. 179) Copyright © 2005 Pearson Prentice Hall, Inc.

26 transcription rRNA + proteins mRNA tRNA ribosomes tRNA amino acids
translation Figure :10-8 Title: An overview of information flow in a cell, from gene transcription to chemical reactions catalyzed by enzymes Caption: modification degradation

27 exons DNA introns promoter DNA transcription initial RNA transcript
Eukaryotic gene structure exons DNA promoter introns A typical eukaryotic gene consists of sequences of DNA called exons, which code for the amino acids of a protein (medium blue), and intervening sequences called introns (dark blue), which do not. The promoter determines where RNA polymerase will begin transcription. RNA synthesis and processing in eukaryotes DNA transcription initial RNA transcript Figure: E10-1 Title: Eukaryotic genes contain introns and exons RNA splicing introns cut out and broken down completed mRNA to cytoplasm for translation RNA polymerase transcribes both the exons and introns, producing a long RNA molecule. Enzymes in the nucleus then cut out the RNA introns and splice together the exons to form the true mRNA, which moves out of the nucleus and is translated on the ribosomes.

28 Eukaryotic gene structure
exons DNA promoter introns Figure: E10-1 part a Title: Eukaryotic genes contain introns and exons part a Eukaryotic gene structure A typical eukaryotic gene consists of sequences of DNA called exons, which code for the amino acids of a protein (medium blue), and intervening sequences called introns (dark blue), which do not. The promoter determines where RNA polymerase will begin transcription.

29 RNA synthesis and processing in eukaryotes
DNA transcription initial RNA transcript RNA splicing introns cut out and broken down completed mRNA Figure: E10-1 part b Title: Eukaryotic genes contain introns and exons part b RNA synthesis and processing in eukaryotes to cytoplasm for translation RNA polymerase transcribes both the exons and introns, producing a long RNA molecule. Enzymes in the nucleus then cut out the RNA introns and splice together the exons to form the true mRNA, which moves out of the nucleus and is translated on the ribosomes.

30 10.5 How Are Genes Regulated?
Eukaryotic Cells May Regulate the Transcription of Individual Genes, Regions of Chromosomes, or Entire Chromosomes Regulatory Proteins That Bind to the Gene’s Promoter Alter the Transcription of Individual Genes Some Regions of Chromosomes Are Condensed and Not Normally Transcribed Entire Chromosomes May Be Inactivated, Thereby Preventing Transcription Figure Barr bodies (p. 177) Figure E10.2 Androgen insensitivity leads to female features Figure E10.3 A 48-year-old woman with Werner syndrome Figure Inactivation of the X chromosome regulates gene expression (p. 179) Copyright © 2005 Pearson Prentice Hall, Inc.

31 Figure :10-10 Title: Inactivation of the X chromosome regulates gene expression Caption: This female calico cat carries a gene for orange fur on one X chromosome and a gene for black fur on her other X chromosome. Inactivation of different X chromosomes produces the black and orange patches. The white color is due to an entirely different gene that prevents pigment formation altogether. Question Most orange cats are male. Why?


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