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fMRI Analysis with emphasis on the General Linear Model Last Update: January 18, 2012 Last Course: Psychology 9223, W2010,

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Presentation on theme: "fMRI Analysis with emphasis on the General Linear Model Last Update: January 18, 2012 Last Course: Psychology 9223, W2010,"— Presentation transcript:

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2 fMRI Analysis with emphasis on the General Linear Model http://www.fmri4newbies.com/ Last Update: January 18, 2012 Last Course: Psychology 9223, W2010, University of Western Ontario Jody Culham Brain and Mind Institute Department of Psychology University of Western Ontario

3 Part 1 Statistical Intuitions

4 What data do we start with 12 slices * 64 voxels x 64 voxels = 49,152 voxels Each voxel has 136 time points (volumes) Therefore, for each run, we have 6.7 million data points We often have several runs for each experiment … These #s are from an obsolete scanner. With a modern 3T, we can get 3X the slices

5 Why do we need stats? We could, in principle, analyze data by voxel surfing: move the cursor over different areas and see if any of the time courses look interesting Slice 9, Voxel 1, 0Slice 9, Voxel 0, 0 Even where there’s no brain, there’s noise Slice 9, Voxel 9, 27 Here’s a voxel that responds well whenever there’s visual stimulation Slice 9, Voxel 13, 41 Here’s one that responds well whenever there’s intact objects Slice 9, Voxel 14, 42 Here’s a couple that sort of show the right pattern but is it “real”? Slice 9, Voxel 18, 36 Slice 9, Voxel 22, 7 The signal is much higher where there is brain, but there’s still noise

6 Why do we need stats? Clearly voxel surfing isn’t a viable option. We’d have to do it 49,152 times in this data set and it would require a lot of subjective decisions about whether activation was real This is why we need statistics Statistics: –tell us where to look for activation that is related to our paradigm –help us decide how likely it is that activation is “real” The lies and damned lies come in when you write the manuscript

7 Predicted Responses fMRI is based on the Blood Oxygenation Level Dependent (BOLD) response It takes about 5 sec for the blood to catch up with the brain We can model the predicted activation in one of two ways: 1.shift the boxcar by approximately 5 seconds (2 images x 2 seconds/image = 4 sec, close enough) 2.convolve the boxcar with the hemodynamic response to model the shape of the true function as well as the delay PREDICTED ACTIVATION IN VISUAL AREA BOXCAR SHIFTED CONVOLVED WITH HRF PREDICTED ACTIVATION IN OBJECT AREA

8 Types of Errors Slide modified from Duke course Is the region truly active? Does our stat test indicate that the region is active? Yes No YesNo HIT Type I Error Type II Error Correct Rejection p value: probability of a Type I error e.g., p <.05 “There is less than a 5% probability that a voxel our stats have declared as “active” is in reality NOT active

9 Statistical Approaches in a Nutshell t-tests compare activation levels between two conditions use a time-shift to account for hemodynamic lag correlations model activation and see whether any areas show a similar pattern Fourier analysis Do a Fourier analysis to see if there is energy at your paradigm frequency Fourier analysis images from Huettel, Song & McCarthy, 2004, Functional Magnetic Resonance Imaging

10 Effect of Thresholds r = 0 0% of variance p < 1 r =.24 6% of variance p <.05 r =.50 25% of variance p <.000001 r =.40 16% of variance p <.000001 r =.80 64% of variance p < 10 -33

11 Complications Not only is it hard to determine what’s real, but there are all sorts of statistical problems r =.24 6% of variance p <.05 What’s wrong with these data? Potential problems 1.data may be contaminated by artifacts (e.g., head motion, breathing artifacts) 2..05 * 49,152 = 2457 “significant” voxels by chance alone 3.many assumptions of statistics (adjacent voxels uncorrelated with each other; adjacent time points uncorrelated with one another) are false

12 The General Linear Model (GLM) GLM definition from Huettel et al.: a class of statistical tests that assume that the experimental data are composed of the linear combination of different model factors, along with uncorrelated noise Model –statistical model Linear –things add up sensibly (1+1 = 2) note that linearity refers to the predictors in the model and not necessarily the BOLD signal General –many simpler statistical procedures such as correlations, t-tests and ANOVAs are subsumed by the GLM

13 Benefits of the GLM GLM is an overarching tool that can do anything that the simpler tests do allows any combination of contrasts (e.g., intact - scrambled, scrambled - baseline), unlike simpler methods (correlations, t-tests, Fourier analyses) allows more complex designs (e.g., factorial designs) allows much greater flexibility for combining data within subjects and between subjects allows comparisons between groups allows counterbalancing orders within and between subjects allows modelling of known sources of noise in the data (e.g., error trials, head motion)

14 Part 2 Composition of a Voxel Time Course

15 A Simple Experiment Intact Objects Scrambled Objects Blank Screen TIME One volume (12 slices) every 2 seconds for 272 seconds (4 minutes, 32 seconds) Condition changes every 16 seconds (8 volumes) Lateral Occipital Complex responds when subject views objects

16 What’s real? A.C. B.D.

17 What’s real? I created each of those time courses based by taking the predictor function and adding a variable amount of random noise = + signal noise

18 What’s real? Which of the data sets below is more convincing?

19 Formal Statistics Formal statistics are just doing what your eyeball test of significance did –Estimate how likely it is that the signal is real given how noisy the data is confidence: how likely is it that the results could occur purely due to chance? “p value” = probability value –If “p =.03”, that means there is a.03/1 or 3% chance that the results are bogus By convention, if the probability that a result could be due to chance is less than 5% (p <.05), we say that result is statistically significant Significance depends on –signal (differences between conditions) –noise (other variability) –sample size (more time points are more convincing)

20 Let’s create a time course for one LO voxel

21 We’ll begin with activation Response to Intact Objects is 4X greater than Scrambled Objects

22 Then we’ll assume that our modelled activation is off because a transient component

23 Our modelled activation could be off for other reasons All of the following could lead to inaccurate models different shape of function different width of function different latency of function

24 Reminder: Variability of HRF Intersubject variability of HRF in M1 Handwerker et al., 2004, NeuroImage

25 Now let’s add some variability due to head motion

26 …though really motion is more complex Head motion can be quantified with 6 parameters given in any motion correction algorithm –x translation –y translation –z translation –xy rotation –xz rotation –yz rotation For simplicity, I’ve only included parameter one in our model Head motion can lead to other problems not predictable by these parameters

27 Now let’s throw in a pinch of linear drift linear drift could arise from magnet noise (e.g., parts warm up) or physiological noise (e.g., subject’s head sinks)

28 and then we’ll add a dash of low frequency noise low frequency noise can arise from magnet noise or physiological noise (e.g., subject’s cycles of alertness/drowsiness) low frequency noise would occur over a range of frequencies but for simplicity, I’ve only included one frequency (1 cycle per run) here –Linear drift is really just very low frequency noise

29 and our last ingredient… some high frequency noise high frequency noise can arise from magnet noise or physiological noise (e.g., subject’s breathing rate and heartrate)

30 When we add these all together, we get a realistic time course

31 Part 3 General Linear Model

32 Now let’s be the experimenter First, we take our time course and normalize it using z scores z = (x - mean)/SD normalization leads to data where –mean = zero –SD = 1 Alternative: You can transform the data into % BOLD signal change. This is usually a better approach because it’s not dependent on variance

33 If you only pay attention to one slide in this lecture, it should be the next one!!!

34 We create a GLM with 2 predictors fMRI Signal × 1× 1 × 2× 2 = ResidualsDesign Matrix ++ “what we CAN explain” “what we CANNOT explain” = + Betasx “how much of it we CAN explain” “our data” = + x Statistical significance is basically a ratio of explained to unexplained variance

35 Implementation of GLM in SPM SPM represents time as going down SPM represents predictors within the design matrix as grayscale plots (where black = low, white = high) over time GLM includes a constant to take care of the average activation level throughout each run –SPM shows this explicity (BV may not)  Time Many thanks to Øystein Bech Gadmar for creating this figure in SPM Intact Predictor Scrambled Predictor

36 Effect of Beta Weights Adjustments to the beta weights have the effect of raising or lowering the height of the predictor while keeping the shape constant

37 Dynamic Example

38 The beta weight is NOT a correlation correlations measure goodness of fit regardless of scale beta weights are a measure of scale small ß large r large ß large r small ß small r large ß small r

39 We create a GLM with 2 predictors fMRI Signal “what we CAN explain” “what we CANNOT explain” “how much of it we CAN explain” “our data” when  1 =2 when  2 =0.5 = = BetasxDesign Matrix + + Residuals + = + x Statistical significance is basically a ratio of explained to unexplained variance

40 Correlated Predictors Where possible, avoid predictors that are highly correlated with one another This is why we NEVER include a baseline predictor –baseline predictor is almost completely correlated with the sum of existing predictors Two stimulus predictorsBaseline predictor + = r = -.95 r = -.53

41 Which model accounts for this data? x β = 1 Because the predictors are highly correlated, the model is overdetermined and you can’t tell which beta combo is best OR x β = 1 x β = 0 + + x β = -1 + +

42 Orthogonalizing Regressors

43 Contrasts in the GLM We can examine whether a single predictor is significant (compared to the baseline) We can also examine whether a single predictor is significantly greater than another predictor

44 Contrasts  “balanced” Conjunction of contrasts e.g., (+1 -1 0) AND (+1 0 -1) (Bio motion - Nonbio motion) AND (Bio motion > control) more rigorous than balanced contrast hypothetical (but not actual) conjunction p value = multiple of independent p values e.g.,.01 x.01 =.001

45 A Real Voxel Here’s the time course from a voxel that was significant in the +Intact - Scrambled comparison

46 Maximizing Your Power As we saw earlier, the GLM is basically comparing the amount of signal to the amount of noise How can we improve our stats? increase signal decrease noise increase sample size (keep subject in longer) = + signal noise

47 How to Reduce Noise If you can’t get rid of an artifact, you can include it as a “predictor of no interest” to soak up variance Example: Some people include predictors from the outcome of motion correction algorithms Corollary: Never leave out predictors for conditions that will affect your data (e.g., error trials) This works best when the motion is uncorrelated with your paradigm (predictors of interest)

48 Reducing Residuals

49 Part 3 Deconvolution of Event-Related Designs Using the GLM

50 Convolution of Single Trials Neuronal Activity Haemodynamic Function BOLD Signal Time Slide from Matt Brown

51 Fast fMRI Detection A) BOLD Signal B) Individual Haemodynamic Components C) 2 Predictor Curves for use with GLM (summation of B) Slide from Matt Brown

52 DEconvolution of Single Trials Neuronal Activity Haemodynamic Function BOLD Signal Time Slide from Matt Brown

53 Deconvolution Example time course from 4 trials of two types (pink, blue) in a “jittered” design

54 Summed Activation

55 Single Stick Predictor single predictor for first volume of pink trial type

56 Predictors for Pink Trial Type set of 12 predictors for subsequent volumes of pink trial type need enough predictors to cover unfolding of HRF (depends on TR)

57 Predictor Matrix Diagonal filled with 1’s......

58 Predictors for the Blue Trial Type set of 12 predictors for subsequent volumes of blue trial type

59 Predictor x Beta Weights for Pink Trial Type sequence of beta weights for one trial type yields an estimate of the average activation (including HRF)

60 Predictor x Beta Weights for Blue Trial Type height of beta weights indicates amplitude of response (higher betas = larger response)

61 Linear Deconvolution Jittering ITI also preserves linear independence among the hemodynamic components comprising the BOLD signal. Miezen et al. 2000

62 Fast fMRI: Estimation Pros: Produces time course Does not assume specific shape for hemodynamic function Robust against trial history biases (though not immune to it) Compound trial types possible Cons: Complicated Unrealistic assumptions about linearity if trials are too close in time –BOLD is non-linear with inter-event intervals < 6 sec. –Nonlinearity becomes severe under 2 sec. Sensitive to noise

63 Part 4 Dealing with Faulty Assumptions

64 What’s this #*%&ing reviewer complaining about?! Particularly if you do voxelwise stats, you have to be careful to follow the accepted standards of the field. In the past few years the following approaches have been recommended by the stats mavens: 1.Correction for multiple comparisons 2.Random effects analyses 3.Correction for serial correlations

65 Dead Salmon 130,000 voxels no correction for multiple comparisons poster at Human Brain Mapping conference, 2009

66 Fishy Headlines

67 Correction for Multiple Comparisons 1)Bonferroni correction divide desired p value by number of comparisons Example: desired p value: p <.05 number of voxels: 50,000 required p value: p <.05 / 50,000  p <.000001 quite conservative can use less stringent values e.g., Brain Voyager can use the number of voxels in the cortical surface small volume correction: use more liberal thresholds in areas of the brain which you expected to be active With conventional probability levels (e.g., p <.05) and a huge number of comparisons (e.g., 64 x 64 x 12 = 49,152), a lot of voxels will be significant purely by chance e.g.,.05 * 49,152 = 2458 voxels significant due to chance How can we avoid this?

68 Correction for Multiple Comparisons 2)Gaussian random field theory Fundamental to SPM If data are very smooth, then the chance of noise points passing threshold is reduced Can correct for the number of “resolvable elements” (“resels”) rather than number of voxels Slide modified from Duke course

69 3)Cluster correction falsely activated voxels should be randomly dispersed set minimum cluster size to be large enough to make it unlikely that a cluster of that size would occur by chance some algorithms assume that data from adjacent voxels are uncorrelated (not true) some algorithms (e.g., Brain Voyager) estimate and factor in spatial smoothness of maps cluster threshold may differ for different contrasts 4)Test-retest reliability Perform statistical tests on each half of the data The probability of a given voxel appearing in both purely by chance is the square of the p value used in each half e.g.,.001 x.001 =.000001 Alternatively, use the first half to select an ROI and evaluate your hypothesis in the second half.

70 5)False discovery rate (Genovese et al, 2002, NeuroImage) “controls the proportion of rejected hypotheses that are falsely rejected” standard p value (e.g., p <.01) means that a certain proportion of all voxels will be significant by chance (1%) FDR uses q value (e.g., q <.01), meaning that a certain proportion of the “activated” (colored) voxels will be significant by chance (1%) works in theory, though in practice, my lab hasn’t been that satisfied Is the region truly active? Does our stat test indicate that the region is active? Yes No YesNo HIT Type I Error Type II Error Correct Rejection

71 6)Poor man’s Bonferroni Jack up the threshold till you get rid of the schmutz (especially in air, ventricles, white matter) If you have a comparison where one condition is expected to produce much more activity than the other, turn on both tails of the comparison Jody’s rule of thumb: “If ya can’t trust the negatives, can ya trust the positives?” Example: MT localizer data Moving rings > stationary rings (orange) Stationary rings > moving rings (blue)

72 Correction for Temporal Correlations Statistical methods assume that each of our time points is independent. In the case of fMRI, this assumption is false. Even in a “screen saver scan”, activation in a voxel at one time is correlated with it’s activation within ~6 sec This fact can artificially inflate your statistical significance.

73 Autocorrelation function To calculate the magnitude of the problem, we can compute the autocorrelation function For a voxel or ROI, correlate its time course with itself shifted in time Plot these correlations by the degree of shift original shift by 1 volume shift by 2 volumes If there’s no autocorrelation, function should drop from 1 to 0 abruptly – pink line The points circled in yellow suggest there is some autocorrelation, especially at a shift of 1, called AR(1) time

74 BV can correct for the autocorrelation to yield revised (usually lower) p values BEFORE AFTER

75 BV Preprocessing Options

76 Temporal Smoothing of Data We have the option in our software to temporally smooth our data (i.e., remove high temporal frequencies) However, I recommended that you not use this option Now do you understand why?

77 Clarification correction for temporal correlations is NOT necessary with random effects analyses, only for fixed effects and individual subjects analysis

78 Collapsed Fixed Effects Models assume that the experimental manipulation has same effect in each subject treats all data as one concatenated set with one beta per predictor (collapsed across all subjects) e.g., Intact = 2 Scrambled =.5 strong effect in one subject can lead to significance even when others show weak or no effects you can say that effect was significant in your group of subjects but cannot generalize to other subjects that you didn’t test

79 Separate Subjects Models one beta per predictor per subject e.g., JC: Intact = 2.1 JC: Scrambled = 0.2 DQ: Intact = 1.5 DQ: Scrambled = 1.0 KV: Intact = 1.2 KV: Scrambled = 1.3 weights each subject equally makes data less susceptible to effects of one rogue subject

80 Random Effects Analysis Typical fMRI stats test whether the differences between conditions are significant in the sample of subjects we have tested Often, we want to be able to generalize to the population as a whole including all potential subjects, not just the ones we tested Random effects analyses allow you to generalize to the population you tested Brain Voyager recommends you don’t even toy with random effects unless you’ve got 10 or more subjects (and 50+ is best) Random effects analyses can really squash your data, especially if you don’t have many subjects. Sometimes we refer to the random effects button as the “make my activation go away” button. Though standards were lower in the early days of fMRI, today it’s virtually impossible to publish any group voxelwise data without random effects analysis You don’t have to worry about it if you’re using the ROI approach because (1) presumably the ROI has already been well-established across multiple labs; and (2) posthoc analyses of results in an ROI approach allow you to generalize to the population (assuming you include individual variance) underpaid graduate students in need of a few bucks!

81 Fixed vs. Random Effects GLM Fixed Effects GLM cannot tell the difference between these data sets because (Intact sum - Scram sum) is the same in both cases In Random Effects GLM, Data set #1 would be more likely to be significant because all 3 subjects show a trend in the same direction (intact > scrambled), whereas in data set #2, only 2 of 3 subjects show a difference in that direction Subject Intact beta Scram beta Diff 1 43 1 2 23 3 41 3 SUM1073 SubjectIntact beta Scram beta Diff 1431 2211 3431 SUM1073 Sample Data #1 Sample Data #2

82 Strategies for Exploration vs. Publication Deductive approach –Have a specific hypothesis/contrast planned –Run all your subjects –Run the stats as planned –Publish Inductive approach –Run a few subjects to see if you’re on the right track –Spend a lot of time exploring the pilot data for interesting patterns –“Find the story” in the data –You may even change the experiment, run additional subjects, or run a follow-up experiment to chase the story While you need to use rigorous corrections for publication, do not be overly conservative when exploring pilot data or you might miss interesting trends Random effects analyses can be quite conservative so you may want to do exploratory analyses with fixed effects (and then run more subjects if needed so you can publish random effects)

83 Part 4 To Localize or Not to Localise?

84 Neuroimagers can’t even agree how to SPELL localiser/localizer!

85 Methodological Fundamentalism The latest review I received…

86 Approach #1: Voxelwise Statistics 1.You don’t necessarily need a priori hypotheses (though sometimes you can use less conservative stats if you have them) 2.Average all of your data together in Talairach space 3.Compare two (or more) conditions using precise statistical procedures within every voxel of the brain. Any area that passes a carefully determined threshold is considered real. 4.Make a list of these areas and publish it. This is the tricky part!

87 Voxelwise Approach: Example Malach et al., 1995, PNAS Question: Are there areas of the human brain that are more responsive to objects than scrambled objects You will recognize this as what we now call an LO localizer, but Malach was the first to identify LO LO activation is shown in red, behind MT+ activation in green LO (red) responds more to objects, abstract sculptures and faces than to textures, unlike visual cortex (blue) which responds well to all stimuli

88 The Danger of Voxelwise Approaches Source: Decety et al., 1994, Nature This is one of two tables from a paper Some papers publish tables of activation two pages long How can anyone make sense of so many areas?

89 Approach #2: Region of interest (ROI) analysis If you are looking at a well-established area (such as visual cortex, motor cortex, or the lateral occipital complex), it’s fairly easy to activate and identify the area 1.Do the stats and play with the threshold till you get something believable in the right vicinity based on anatomical location (e.g., sulcal landmarks) or functional location (e.g., Talairach coordinates from prior studies) 2.Once you have found the ROI, do independent experiments, extract the time course information and determine whether activation differences between conditions are significant –Because the runs that are used to generate the area are independent from those used to test the hypothesis, liberal statistics (p <.05) can be used

90 Example of ROI Approach Culham et al., 2003, Experimental Brain Research Does the Lateral Occipital Complex compute object shape for grasping? Step 1: Localize LOC Intact Objects Scrambled Objects

91 Example of ROI Approach Culham et al., 2003, Experimental Brain Research Does the Lateral Occipital Complex compute object shape for grasping? Step 2: Extract LOC data from experimental runs Grasping Reaching NS p =.35 NS p =.31

92 Example of ROI Approach Very Simple Stats NS p =.35 NS p =.31 % BOLD Signal Change Left Hem. LOC SubjectGraspingReaching 10.020.03 20.190.08 30.040.01 40.100.32 51.01-0.27 60.160.09 70.190.12 Extract average peak from each subject for each condition Then simply do a paired t-test to see whether the peaks are significantly different between conditions Instead of using % BOLD Signal Change, you can use beta weights You can also do a planned contrast in Brain Voyager using a module called the ROI GLM

93 Utility of Doing Both Approaches We also verified the result with a voxelwise approach Verification of no LOC activation for grasping > reaching even at moderate threshold (p <.001, uncorrected)

94 Example: The Danger of ROI Approaches Example 1: LOC may be a heterogeneous area with subdivisions; ROI analyses gloss over this Example 2: Some experiments miss important areas (e.g., Kanwisher et al., 1997 identified one important face processing area -- the fusiform face area, FFA -- but did not report a second area that is a very important part of the face processing network -- the occipital face area, OFA -- because it was less robust and consistent than the FFA.

95 Comparing the two approaches Voxelwise Analyses Require no prior hypotheses about areas involved Include entire brain Often neglect individual differences Can lose spatial resolution with intersubject averaging Can produce meaningless “laundry lists of areas” that are difficult to interpret You have to be fairly stats-savvy and include all the appropriate statistical corrections to be certain your activation is really significant Popular in Europe

96 Comparing the two approaches Region of Interest (ROI) Analyses Extraction of ROI data can be subjected to simple stats (no need for multiple comparisons, autocorrelation or random effects corrections) Gives you more statistical power (e.g., p <.05) Hypothesis-driven Useful when hypotheses are motivated by other techniques (e.g., electrophysiology) in specific brain regions ROI is not smeared due to intersubject averaging Important for discriminating abutting areas (e.g., V1/V2) Easy to analyze and interpret Neglects other areas which may play a fundamental role If multiple ROIs need to be considered, you can spend a lot of scan time collecting localizer data (thus limiting the time available for experimental runs) Works best for reliable and robust areas with unambiguous definitions Popular in North America

97 A Proposed Resolution There is no reason not to do BOTH ROI analyses and voxelwise analyses –ROI analyses for well-defined key regions –Voxelwise analyses to see if other regions are also involved Ideally, the conclusions will not differ If the conclusions do differ, there may be sensible reasons –Effect in ROI but not voxelwise perhaps region is highly variable in stereotaxic location between subjects perhaps voxelwise approach is not powerful enough –Effect in voxelwise but not ROI perhaps ROI is not homogenous or is context-specific

98 Part 5 The War of Non-Independence

99 Finding the Obvious Non-independence error occurs when statistical tests performed are not independent from the means used to select the brain region Arguments from Vul & Kanwisher, book chapter in press A priori probability of getting JQKA sequence = (1/13) 4 = 1/28,561 A posteriori probability of getting JQKA sequence = 1/1 = 100%

100 Non-independence Error Egregious example Identify Area X with contrast of A > B Do post hoc stats showing that A is statistically higher than B Act surprised More subtle example of selection bias Identify Area X with contrast of A > B Do post hoc stats showing that A is statistically higher than C and C is statistically greater than B Arguments from Vul & Kanwisher, book chapter in press Figure from Kriegeskorte et al., 2009, Nature Neuroscience

101 Double Dipping & How to Avoid It Kriegeskorte et al., 2009, Nature Neuroscience surveyed 134 papers in prestiguous journals 42% showed at least one example of non- independence error

102 Correlations Between Individual Subjects’ Brain Activity and Behavioral Measures Sample of Critiqued Papers: Eisenberg, Lieberman & Williams, 2003, Science measured fMRI activity during social rejection correlated self-reported distress with brain activity found r =.88 in anterior cingulate cortex, an area implicated in physical pain perception concluded “rejection hurts” social exclusion > inclusion

103 “Voodoo Correlations” reliability of personality and emotion measures: r ~.7 reliability of activation in a given voxel: r ~.7 highest expected behavior: fMRI correlation is ~.74 so how can we have behavior: fMRI correlations of r ~.9?! 2009 Voodoo The original title of the paper was not well-received by reviewers so it was changed even though some people still use the term

104 “Voodoo Correlations” "Notably, 53% of the surveyed studies selected voxels based on a correlation with the behavioral individual-differences measure and then used those same data to compute a correlation within that subset of voxels." Vul et al., 2009, Perspectives on Psychological Science

105 Avoiding “Voodoo” Use independent means to select region and then evaluate correlation Do split-half reliability test –WARNING: This is reassuring that the result can be replicated in your sample but does not demonstrate that result generalizes to the population

106 Is the “voodoo” problem all that bad? High correlations can occur in legitimately analyzed data Did voxelwise analyses use appropriate correction for multiple comparisons? –then result is statistically significant regardless of specific correlation Is additional data being used for 1.inference purposes? –if they pretend to provide independent support, that’s bad 2.presentation purposes? –alternative formats can be useful in demonstrating that data is clean (e.g., time courses look sensible; correlations are not driven by outliers)


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