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Chapter 12 – DNA and RNA Section 12-1: DNA. Mendel helped to figure out what genes were, but how exactly where these genes passed on? In 1928, Frederick.

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Presentation on theme: "Chapter 12 – DNA and RNA Section 12-1: DNA. Mendel helped to figure out what genes were, but how exactly where these genes passed on? In 1928, Frederick."— Presentation transcript:

1 Chapter 12 – DNA and RNA Section 12-1: DNA

2 Mendel helped to figure out what genes were, but how exactly where these genes passed on? In 1928, Frederick Griffith (British) was doing experiments with bacteria and mice to figure out how bacteria make us sick

3 When Griffith heat killed the smooth bacteria, the bacteria no longer killed He found 2 different strains of pneumonia bacteria; Smooth (S) and Rough (R) The smooth bacteria caused death but the rough bacteria seemed harmless

4 Griffith called this a transformation  the rough strain was permanently changed by the smooth strain Griffith hypothesized that some factor was transferred from one strain to another and that the factor might be a gene Then Griffith mixed heat killed smooth bacteria with living rough bacteria (neither should have caused disease) and it caused death

5 In 1944, Oswald Avery (Canadian) repeated Griffiths experiment and found similar results In 1952, Alfred Hershey and Martha Chase were performing experiments to verify Avery’s discovery They were studying viruses, specifically bacteriophages = viruses that infect bacteria Bacteriophages are made of DNA or RNA inside a protein coat

6 Hershey and Chase decided if they could tell if the DNA or the protein was being injected into the bacteria, they could determine what genes were made of They used 2 radioactive markers, phosphorus-32 and sulfur-35

7 Proteins contain almost no phosphorus  so if they found the phosphorus marker, it was DNA carrying the genes DNA contains no sulfur  so if they found the sulfur marker, it was proteins carrying the genes They found all of the radioactivity in the bacteria was from phosphorus, making the genetic material DNA

8 DNA is a long molecule made up of nucleotides A nucleotide if made of 3 components; a 5-carbon sugar called deoxyribose, a phosphate group, and a nitrogen-containing base Scientists wanted to know more about the structure of DNA

9 Two belong to a group known as pyrimidines (one ring in their structure)  cytosine and thymine There are 4 kinds of nitrogen-containing bases in DNA; adenine, guanine, cytosine, and thymine Two belong to a group known as purines (two rings in their structure)  adenine and guanine

10 This set up of DNA seemed almost too simple, so of course scientists did more experiments to find out more about it The sugar and phosphate form the backbone of the DNA and the nitrogen- containing bases stick out sideways – the bases can be in any order

11 Erwin Chargraff observed that in different types of organisms that the percentages of guanine [G] and cytosine [C] were almost equal and the percentages of adenine [A] and thymine [T] were almost equal Chargraff’s rules says [A] = [T] and [C] = [G]

12 The photos from the X-rays showed an X-shaped pattern  showing that the strands of DNA are twisted around each other like a helix The angle of the X showed that there were 2 strands in the structure In the early 1950’s, Rosalind Franklin (British) studied DNA using a X-ray diffraction

13 Watson and Crick’s model of DNA was a double helix where the 2 strands wound around each other A double helix looks like a twisted staircase Around the same time, James Watson and Francis Crick were working to build a model of the structure of DNA

14 They found hydrogen bonds could form between certain base pairs – they called this base-pairing and it helped explain Chargraff’s rules Adenine always pairs with thymine and guanine always pairs with cytosine The double helix helped explain some of DNA’s properties, but they weren’t sure what held the strands together

15 Section 12-2: Chromosomes and DNA Replication

16 Prokaryotes do not have a nucleus, so their DNA is found in their cytoplasm Most prokaryotes have a single circular DNA molecule – this is called the cell’s chromosome So where is the DNA located within a cell?

17 The DNA is found in the nucleus in the form of multiple chromosomes The number of chromosomes varies from species to species In eukaryotes, there is much more DNA than in prokaryotes

18 The nucleus of a human cell contains more than 1 meter of DNA, so how does it all fit? In eukaryotes, DNA and proteins are packed tightly to form chromatin DNA molecules can be surprisingly long and must be folded into a tiny space In the chromatin, DNA is wound around proteins called histones  they almost look like beads on a string

19 These pack together to form a thick fiber that gets shortened into loops & coils Normally, these fibers are dispersed through the nucleus, but during mitosis, they condense into visible chromosomes

20 This means that the strands are complementary to one another and that when split up, each half can be used to create the other half and thereby create two new identical DNA molecules The double helix structure helped to explain how DNA can be replicated One strand of DNA has the information needed to complete the other half through base pairing

21 In prokaryotes, DNA replication usually starts at one point and proceeds in two directions until the whole chromosome of replicated In eukaryotes, DNA replication occurs at hundreds of places

22 At each point, replication happens in 2 directions until the whole chromosome is copied Replication forks = the sites where separation and replication occur Each strand serves as a template as to how to add on base pairs Ex. A sequence of TACGTT will produce a complimentary strand of ATGCAA

23 DNA polymerase joins individual base pairs to the DNA molecule  it can also “proofread” new DNA strand to make sure they are a perfect copy of the original Several enzymes are involved in the process of DNA replication DNA helicase is used to “unzip” the 2 strands of DNA

24 Section 12-3: RNA and Protein Synthesis

25 Genes are just instructions coded on DNA – we just need a way to put those instructions to work  that’s where RNA comes in

26 1. The sugar is ribose instead of deoxyribose RNA has a similar structure to DNA but there are 3 major differences RNA is basically a disposable copy of DNA, it can help make hundreds or thousands of copies without hurting the master copy 2. RNA is a single strand instead of a double strand 3. RNA contains uracil in place of thymine

27 Most RNA is involved in protein synthesis – assembling amino acids into proteins There are 3 main types of RNA involved in protein synthesis; mRNA, rRNA, tRNA

28 1. Messenger RNA (mRNA) – It carries copies of instructions for proteins from the DNA to the rest of the cell – it basically acts as a messenger

29 2. Ribosomal RNA (rRNA) – it makes up parts of ribosomes - they serve as sites where the proteins are made 3. Transfer RNA (tRNA) – it transfers amino acids to the ribosome guided by the instructions of the mRNA

30 Transcription = the process of copying part of a nucleotide sequence from DNA to RNA Transcription requires an enzyme known as RNA polymerase (similar to DNA polymerase)

31 RNA polymerase can’t start copying at just any point – it has to bind at a specific spot During transcription, RNA polymerase binds to DNA and separates the DNA strands  it then uses one strand of DNA as a template to form a strand of RNA

32 The promoter basically tells the enzyme where to start copying There is a similar signal to stop copying Promoter = a region where the enzyme can bind that has a specific sequence of nucleotides

33 In DNA there are areas that are called introns – they are not involved in coding proteins There are also areas called exons – they are involved in coding proteins (they are “expressed”) Once copied, the RNA does get edited before leaving the nucleus with instructions for proteins Introns are cut out of the RNA  the exons are spliced together and this forms the mRNA that leaves the nucleus

34 The instructions carried by the mRNA is the genetic code – the code consists of the 4 nitrogen-containing bases  there are basically 4 letters in the code Now that we have mRNA instructions, how do those eventually make proteins These 4 letters in the code can create 20 different amino acids  this is possible because the code is read 3 letters at a time

35 Each “word” of the code is 3 bases long  each of these “words” is known as a codon Ex. The code UCGCACGGU would be broken into groups of 3 bases  UCG-CAC-GGU Because there are 4 bases, there are 64 possible 3-base codons

36 Some amino acids are coded for by several codons There is one codon that acts as a start for protein synthesis and there are three codons that act as a stop for synthesis

37 These instructions are carried by the mRNA to the ribosomes where they are used to create proteins in a process known as translation During translation, the cell uses information from mRNA to produce proteins

38 2. As each codon of the mRNA moves through the ribosome an amino acid is brought to the ribosome by tRNA Each tRNA molecule only carries one type of amino acid Each tRNA molecule also has 3 unpaired bases (anticodon) so that it knows where to match up on the mRNA  codons and anticodons are complementary Translation occurs in a series of steps 1. mRNA in the cytoplasm attaches to a ribosome

39 4. The amino acid chain grows until the ribosome reaches a stop codon – the ribosome then releases both the mRNA and the newly formed polypeptide 3. Peptide bonds form between the adjacent amino acids – at the same time the bond between the amino acid and the tRNA is broken so the tRNA is free to pick up another amino acid

40 Over all, DNA gets replicated to form new DNA  it then gets transcribed into RNA  the RNA then gets translated into proteins

41 Section 12-4: Mutations

42 There are 2 main classifications of mutations; gene mutations and chromosome mutations Mutations are changes in the genetic material

43 Gene mutations are mutations in just a single gene Point mutations involve changes in just one or a few nucleotides Substitutions happen when one nucleotide is swapped for another  this usually only effects one amino acid

44 Frameshift mutations shift the reading frame of the nucleotides  this affects any amino acids after the mutation Insertions happen when one nucleotide is inserted in the wrong place Deletions happen when a nucleotide is deleted

45 Deletions – involve the loss of all or part of the chromosome Duplications – extra parts of the chromosome are made Chromosomal mutations involve changes in a number of structures of the chromosome

46 Inversions – parts of the chromosome are reversed Translocations – part of the chromosome breaks off and attaches to another

47 Some mutations causes dramatic changes that disrupt normal activity There are many genetic disorders that are caused by mutations Harmful mutations are also associated with cancer Some mutations are “neutral” – they don’t cause any change in protein function Some mutations are beneficial

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