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Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Block diagram representation of the manual segmentation procedure. Figure Legend:

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Presentation on theme: "Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Block diagram representation of the manual segmentation procedure. Figure Legend:"— Presentation transcript:

1 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Block diagram representation of the manual segmentation procedure. Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

2 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Block diagram representation of the cross-validation experimental setup: region of interest. Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

3 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Overlay of surface outlines on individual slices of T1 MRI in the three orthogonal views along with the surface representation for a representative subject in the template library. [Cerebellum (green), thalamus (magenta), caudate (turquoise), hippocampus (blue), putamen (red), and lateral ventricles (yellow).] Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

4 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Overlay of surface outlines on individual slices of T1 MRI in the three orthogonal views along with the surface representation for a subject in the template library. [Corpus callossum (green), third ventricle (yellow), fourth ventricle (blue), and brainstem (red).] Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

5 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Dice similarity coefficients for the leave-N-out cross-validation experiment (100 repetitions) or 16 subcortical structures. Ten templates were randomly selected from the group of 22 templates and the remaining were segmented through the FreeSurfer (FS) + Large Deformation Diffeomorphic Metric Mapping (LDDMM) pipeline with the 10 selected templates. [Box plot legend: median (midline), box (25th and 75th percentiles), and whiskers (extrema).] Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

6 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Dice similarity coefficient for the pediatric template library segmented with preterm born (red), full-term born (blue), and all (black) templates compared with the manual segmentation data. Segmentation conducted through the FS + LDDMM pipeline. [Box plot legend: median (midline), box (25th and 75th percentiles), and whiskers (extrema).] Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502

7 Date of download: 5/28/2016 Copyright © 2016 SPIE. All rights reserved. Dice similarity coefficient for the subjects in the pediatric template library segmented with adult (red) and pediatric (blue) templates compared with the manual segmentation data. Segmentation conducted through the FS + LDDMM pipeline. [Box plot legend: median (midline), box (25th and 75th percentiles), and whiskers (extrema).] Figure Legend: From: Manually segmented template library for 8-year-old pediatric brain MRI data with 16 subcortical structures J. Med. Imag. 2014;1(3):034502. doi:10.1117/1.JMI.1.3.034502


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