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UAF/OSMC Presenters: Kevin O’Brien and Eugene Burger Abstract: Kevin O’Brien and Eugene Burger are from NOAA’s Pacific Marine Environmental Laboratory in Seattle, WA. They will address ways they are working toward creating integrated data sets. They will talk about the United Access Framework (UAF) project and modernization of the Tropical Pacific Observing System (TPOS) (PMEL is building an integrated framework to provide access to real-time and delayed mode data from various platform networks making observations in the Tropical Pacific). They will also present progress on creating an ERDDAP interface to the Observing System Monitoring Center (OSMC) database. OSMC contains almost 10 years of observations harvested from the Global Telecommunications System and represents one of a very few places the public can access the real time observations that are available to the operational modeling centers. One group at Rugters is assimilating data from OSMC in real time. PMEL is building an integrated framework to provide access to real-time and delayed mode data from various platform networks making observation in the Tropical Pacific. The United Access Framework (UAF) has been developing a capability and continues to work on providing NOAA-wide and NOAA partner CF-compliant catalogs that can be accessed by known clients and are readily accessible by users. An objective of our discussion on this topic is to generate ideas for collaboration that can be used to rekindle some momentum at NOAA for this project. The purpose of the presentation will be to share ideas and to provoke a conversation of a pan- regional access point for ocean observations as proposed in the IOOC Modeling Strategy.
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Improving Data Catalogs Kevin O’Brien - University of Washington/JISAO, NOAA/PMEL Roland Schweitzer – Weathertop Consulting Eugene Burger – NOAA/PMEL
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The Unified Access Framework (UAF) A Global Earth Observation Integrated Data Environment (GEO-IDE) project An attempt to improve scientific data management and access Focus on successes
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Lots of data already available
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Projects: (too many to name) Data formats: netCDFGRIBASCII Applications: MatlabArcGISFerret GrADS Google Earth IDV LAS ERDDAP … Users: (too many to name) … netCDF-CF-DAP-THREDDS-WMS
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Developing the UAF Catalog Cleaner (a ‘web crawler’) ‘ RAW ’ ‘CLEAN’
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Tree Crawl Dataset Crawl Cleaner CatalogRef and Dataset URL’s Raw catalog XML
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Tree Crawl Dataset Crawl Cleaner url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/OCEAN_GEOSTROPHIC_CURRENTS/CURRENTS.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/GLOBAL_MONTHLY_CARBON_FLUXES/FLUXES.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/GLOBAL_SEASON_CARBON_FLUXES/FLUXES.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/ROMSMETEO/kk1.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/MCI_GULF/kk1.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/MSGSST/SST.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/TERRA_K490_GULF/terrak490.nc" url="http://cwcgom.aoml.noaa.gov/thredds/dodsC/TERRA_K490_GULF_3D/terrak490.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.199910.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.199911.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.199912.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200001.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200002.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200003.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200004.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200005.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200006.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200007.nc" url="http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/NARR.dailyavgs/subsurface/soill.200008.nc". CatalogRef and Dataset URL’s
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Tree Crawl Dataset Crawl Cleaner UAF Clean Catalog
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How to provide feedback to data providers? Remember the “Building on Success” theme ncISO metadata assessment tool is very successful
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How about a catalog quality assessment tool? How to provide feedback to data providers? Remember the “Building on Success” theme ncISO metadata assessment tool is very successful
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Statistics for current catalog and all it’s children Links to rubric reports for child catalogs
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Missing services Data issues
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url
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Data issues Original Catalog
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1.Crawl a collection of catalogs and find all of the OPeNDAP end points. 2.Examine each end point and determine if it has gridded CF compliant netCDF data. The catalog cleaner can...
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1.Report problems: a. No grids found that follow CF b. Unordered time axis c. Data access errors (underlying files missing, mis- configured gateways, etc.) 2.Detect unaggregated time series data 3.Detect missing services The catalog cleaner can...
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1.Write a new catalog with remote links to the data and with local versions of missing services. The catalog cleaner can...
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but shouldn’t… 1.Construct an aggregation to run locally accessing remote data via OPeNDAP. The catalog cleaner can…
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1.Unacceptably poor data access performance. 2.No access to the local file system, so it cannot make a catalog that would aggregate the files via configuration pointing to the local file system. Why not...
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1.Use a modified version of the tool to assess the quality of a local catalog. IE: CatalogCleaner CatalogEvaluator 2.Do the (not difficult) work locally to aggregate files where appropriate and turn on missing services. What to do...
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Moving Forward…. Welcome feedback on rubric and Catalog Cleaner tool Evolution of tool to an evaluation tool UAF master catalog to go beyond gridded files Use ERDDAP to including In Situ featureTypes Building support for visualization of these in LAS Continue community outreach to improve catalogs
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Thank you! UAF: geo-ide.noaa.gov Catalog Cleaner code and documentation: http://ferret.pmel.noaa.gov/LAS/documentation/the-uaf-catalog-cleaner/ http://ferret.pmel.noaa.gov/LAS/documentation/the-uaf-catalog-cleaner/ ERDDAP: upwell.pfeg.noaa.gov/erddap THREDDS: www.unidata.ucar.edu/projects/THREDDS netCDF: www.unidata.ucar.edu/netcdf OPeNDAP: www.opendap.org CF: cf-pcmdi.llnl.gov
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