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On Computing the Underlying Fiber Directions from the Diffusion Orientation Distribution Function
Luke Bloy1, Ragini Verma2 The Section of Biomedical Image Analysis University of Pennsylvania Department of Bioengineering1 Department of Radiology2
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Diffusion Tensor Imaging
Diffusion imaging rests on the assumption that the diffusion process correlates with the underlying tissue structure. DTI model is incapable of representing multiple orientations
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Diffusion Orientation Distribution Function
ODF: Approximates the radial projection of the diffusion propagator. It essentially describes the probability that a water molecule will diffuse in a certain direction. Its maxima have been shown to correspond with principle directions of the underlying diffusion process.
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How to find the maxima of Orientation Distribution Function?
Existing Methods: Optimization Methods Spherical Newton’s method Powell’s method Need to ensure convergence Need to avoid small local maxima Finite Difference Method Accuracy is limited by Mesh Size (accuracy of 4 degrees requires 1280 mesh points NEEDS REFS
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Computing Maxima of the Diffusion Orientation Distribution Function
Our method: Represent ODF as symmetric Cartesian tensor Compute the stationary points of the ODF from a system of polynomial equations Classify the stationary points using the local curvature of the ODF graph into principle directions, secondary maxima, minima and inflection points.
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Equivalence of Real Spherical Harmonic Expansion and Symmetric Cartesian Tensors
Real Spherical Harmonics Real Symmetric Spherical Functions Real Symmetric Cartesian Tensors
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Orientation Distribution Function as a Cartesian Tensor
In spherical coordinates the from of Funk-Radon transform allows a the computation of the ODF RSH expansion in terms of the RSH expansion of the MRI signal. Since M is a change of basis matrix it is invertible and the ODF tensor can be computed
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Stationary points Stationary points are points on the sphere ( ) where the derivative of the ODF vanishes. Using the tensor representation of the ODF, they are solutions to the following system of equations. t is a solution to an lth order polynomial Use the method of resultants to solve for v and u.
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Classification of Stationary Points
Use the principle curvatures (k1, k2) to classify each stationary point: Inflection Points Minima Principle Directions Secondary Maxima
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Stationary points of the Orientation Distribution Function
One Fiber Two Fibers Three Fibers Diffusion ODF reconstructions from simulated fiber populations performed with a rank 4 tensor. Red lines indicate principle directions, Blue minima, Black lines saddle points and green lines indicate secondary maxima.
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Affect of Signal to Noise on Principle Direction Calculation
Single Tensor Model b = 3000 sec /cm2 64 gradient direction 50 DWI signals, each with randomly chosen principle direction, at each SNR SNR: 5,10,15,25,35,45 Angular Error =
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Application to Clinically Feasible Data
3Tesla scanner 64 Gradient Directions Single average Scan time ~ 8 min B = 1000 sec /cm2 CC : Corpus Collosum SCR : Superior Corona Radiata ALIC : Anterior Limb of the Internal Capsule
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Future Work Implementation within fiber tracking framework
Investigation of geometric features (mean curvature/Gauss curvature) of the ODF surface as measures of diffusion anisotropy Thanks…
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Computing Principle Curvatures
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Limitations of Diffusion Tensor Imaging
Single Fibers Multiple Fibers DTI model is incapable of representing multiple orientations As many as 1/3 of white Matter voxels may be effected . Behrens et al, Neuroimage, 34 (1) 2007
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Real Spherical Harmonics of Even Order
Images of the first few?
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Symmetric Cartesian Tensors
Ref Max.
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Relationship between Anisotropy and Mean Curvature
Single tensor model mean diffusivity of mm2/sec SNR = 35 Red line = absence of noise
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False Positives Rates SNR # of PDS 10 65% 15 92% >25 100%
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Equivalence of Real Spherical Harmonic Expansion and Symmetric Cartesian Tensors
Real Symmetric Spherical Functions Real Symmetric Cartesian Tensors Real Spherical Harmonics
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