1. Chapter 4 Cellular Oncogenes - 4.2 ~ 4.6 - Mar 22, 2007

2. Many retroviruses carrying oncogenes have been found in chickens and mice

3. However, attempts undertaken during the 1970s to isolate viruses from most types of human tumors were unsuccessful. Even reverse transcriptase-containing virus particles are difficult to find in human tumor samples.

5. Figure 4.2 (part 1 of 2) The Biology of Cancer (© Garland Science 2007) Sidebar 4.2 (NIH3T3 cells) 4.2 Transfection of DNA provides a strategy for detecting nonviral oncogenes transformed by 3-methycholanthrene

6. Figure 4.2 (part 2 of 2) The Biology of Cancer (© Garland Science 2007) (NIH3T3 cells) DNA from tumor cells The DNA from chemical-transformed tumor cells was able to convert non-tumorigenic NIH3T3 fibroblasts into tumorigenic cells.

7. Figure 4.3 The Biology of Cancer (© Garland Science 2007) Transfection of DNA from T24 human bladder carcinoma cell line into NIH3T3 cells DNA from human cancers also cause focus formation cells in the focus surrounding untransformed monolayer cells focus formation

8. 4.3 Oncogenes discovered in human tumor cell lines are related to those carried by transforming retroviruses Southern blotting (DNA) Northern blotting (RNA)

9. Figure 4.4 (part 2) The Biology of Cancer (© Garland Science 2007) nitrocellulose paper ( 32 P-DNA)

10. Figure 4.4 (part 3) The Biology of Cancer (© Garland Science 2007)

11. Figure 4.5 The Biology of Cancer (© Garland Science 2007) ______________________________ 11 (a ~ k) NIH3T3 cell lines transfected with DNA extracted from a human bladder carcinoma cell line untransfected NIH3T3 Homology between transfected oncogenes and retroviral oncogenes probe used: H-ras oncogene present in Harvey rat sarcoma virus

12. Table 4.1 The Biology of Cancer (© Garland Science 2007) TK : tyrosine kinase

13. Figure 4.6a The Biology of Cancer (© Garland Science 2007) Amplification of the erbB2/HER2/neu oncogene in breast cancers Kaplan-Meier plot

14. Figure 4.6c The Biology of Cancer (© Garland Science 2007) erbB2/neu oncogene is amplified erbB2/neu mRNA is overexpressed increased level of erbB2/neu-encoded protein erbB2/HER2/neu oncogene can be amplified or overexpressed in human breast carcinoma cells

15. Figure 4.8 The Biology of Cancer (© Garland Science 2007) Cloning of transfected human oncogenes Alu sequence - present in about 10 6 copies scattered throughout human genome

16. Figure 4.9 The Biology of Cancer (© Garland Science 2007) Localization of the mutation responsible for oncogene activity cloned DNA of a human bladder carcinoma oncogene

17. Figure 4.10 The Biology of Cancer (© Garland Science 2007) A point mutation is responsible for H-ras oncogene activation

18. 4.4 Proto-oncogenes can be activated by genetic changes affecting either protein expression or structure

19. Figure 4.11a The Biology of Cancer (© Garland Science 2007) homogeneous staining regions (HSR) 4.5 The myc oncogene can arise via at least three distinct mechanisms The N-myc gene amplification is found in 30% of human childhood neuroblastoma. Astrocytoma, retinoblastoma and small-cell lung carcinomas (neuroendocrinal traits) also often exhibit amplified N-myc genes. * N-myc is a close relative of c-myc.

20. Kaplan-Meier plot of childhood neuroblastoma e vent - f ree s urvival

21. Table 4.3 The Biology of Cancer (© Garland Science 2007)

22. Activation of the myc protooncogenes 1. Gene amplification 10 ~ 30 copies or 100 ~ 150 copies shown as homogeneously staining regions (HSR) or double minutes (DM) 2. Provirus integration - insertional mutagenesis constitutive expression by insertion of retroviruses 3. Chromosomal translocation

23. Figure 3.23b The Biology of Cancer (© Garland Science 2007) transcription of myc gene is controlled by viral promoters excessive myc protein Insertional mutagenesis

24. Figure 4.12 The Biology of Cancer (© Garland Science 2007) Burkitt’s lymphoma in Africa (Aedes simpsoni) Malarial infection Epstein-Barr virus (EBV) genome in Burkitt’s lymphoma cells

25. Figure 4.13a The Biology of Cancer (© Garland Science 2007) Chromosome translocations in Burkitt’s lymphoma The expression of c-myc gene is placed under control of the trancription- controlling enhancer sequences of an immunoglobulin heavy chain (IgH) gene.

26. Figure 4.13b The Biology of Cancer (© Garland Science 2007) Genetic map of the translocation event of c-myc gene The c-myc gene is translocated into chromosome 8, under the control of the immunoglobulin heavy-chain (IgH) sequences present on human chromosome 14

27. Table 4.4 The Biology of Cancer (© Garland Science 2007)

28. Figure 4.14 The Biology of Cancer (© Garland Science 2007) 4.6 A diverse array of structural changes in proteins can also lead to oncogene activation (GF)

29. Figure 2.23a The Biology of Cancer (© Garland Science 2007) Philadelphia chromosome (Ph 1 ) The great majority (> 95 %) of chronic myelogenous leukemia (CML) has t(9; 22) (q34; q11) translocation

30. Figure 4.15a The Biology of Cancer (© Garland Science 2007) Formation of the bcr-abl oncogene after t(9; 22) (q34; q11) translocation (Abelson murine leukemia virus) (breakpoint cluster region)

31. Figure 4.15b The Biology of Cancer (© Garland Science 2007) Different breakpoints in bcr results in different types of human leukemia acute lymphocytic leukemia chronic myelogenous leukemia chronic neutrophilic leukemia ↓ a ↓ b ↓ c ↓ ↓ Abl ↑ a. b. c. Bcr Bcr-Abl fusion protein

32. Table 4.5 The Biology of Cancer (© Garland Science 2007)

33. Notations used for proto-oncogenes and oncogenes gene protein Non-human src, myc Src, Myc (chicken, mouse, etc.) Human SRC, MYC SRC, MYC