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DNA and RNA Chapter 12
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How do we know DNA is the genetic material??
Scientists were not sure if protein or DNA was genetic material (both in chromosomes) Griffith (1920s) Experimented with mice and two strains of pneumonia bacteria R (rough) – no disease S (smooth) – causes disease, virulent
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Griffith’s Experiment
Found that R strain was transformed by heat-killed S strain What substance transformed the R strain?? Avery performed further tests in 1940s Treated R strain + heat-killed S strain with: Protease – enzyme that destroys protein DNase – enzyme that destroys DNA
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Avery’s Experiment
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Avery’s Experiment DNA caused the transformation of R strain
Scientists still not convinced!
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Hershey and Chase Exp. Tested bacteriophages (viruses that infect bacteria) DNA contains phosphorus Protein contains sulfur Radioactively labeled phosphorus and sulfur in two batches of phage Infected bacteria with phage Only radioactive phosphorus found in bacteria → DNA entered
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DNA is the genetic material, not protein
And the point is . . . DNA is the genetic material, not protein
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DNA Donor Who’s da’ mama? Clone Surrogate mom
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DNA Structure Double helix Sugar-phosphate backbone 4 nitrogen bases
2 strands twisted around each other Sugar-phosphate backbone 4 nitrogen bases Adenine Thymine Guanine Cytosine Base Pairs
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Nucleotide Structure Phosphate group Deoxyribose sugar – 5 carbon
Nitrogenous base
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Four Nucleotides
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Base Pairing What patterns do you see in this data?
Source of DNA A T G C Streptococcus Yeast Herring Human What patterns do you see in this data?
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Chargaff’s Rule Erwin Chargaff – 1949 Found that # of T = A and G = C
Only explanation is that T pairs with A and C pairs with G If a DNA sample is 20% A, what % will C be? That’s right % (20% A = 20% T, leaves 60% for G and C, 30% each)
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Double Helix Wilkins and Franklin (1952)
Found that DNA was helix shaped through X-ray pictures
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First DNA Model James Watson & Francis Crick (1952)
Constructed a model of DNA using others’ data Twisted ladder with base pairs as rungs of ladder Hydrogen bonds hold base pairs together Nobel Prize 1958
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DNA!
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Chromosomes Prokaryotes – one circular chromosome in cytoplasm
Eukaryotes – many linear chromosomes in nucleus Fruit fly: 8 Human: 46 Oak tree: Chimpanzee: 48 DNA is wrapped around histones (proteins) to fit more in small space
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Chromosome Structure
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DNA Replication Occurs during S phase of Interphase
Exact copies made of all DNA Three steps: Unwind – enzyme is helicase Unzip – enzyme is DNA polymerase Copy – enzyme is DNA polymerase Each strand acts as template for new strands
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DNA Replication DNA not copied one base at a time
Thousands of replication forks on each chromosome Speeds up replication from weeks to minutes Strands are copied in opposite directions Proofreading enzyme checks for errors
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DNA Replication
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DNA Replication Semi-Conservative
Half of parent DNA molecule is conserved (saved) in daughter DNA molecule Daughter DNA is half old and half new DNA
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DNA Replication
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RNA Made of nucleotides Single stranded Uracil instead of Thymine
Phosphate Ribose sugar Nitrogenous base Single stranded Uracil instead of Thymine A pairs with U
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Types of RNA Messenger RNA – mRNA Transfer RNA – tRNA
Carries genetic messages out of nucleus to ribosome b/c DNA can’t leave nucleus Transfer RNA – tRNA Brings amino acids to mRNA at ribosomes Ribosomal RNA – rRNA Makes up ribosome
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Protein Synthesis Each chromosome has hundreds of genes
Each gene codes for one protein 2 steps: Transcription: DNA → mRNA In nucleus Translation: mRNA → protein At ribosome
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Transcription Translation
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Transcription DNA unwinds, unzips
RNA polymerase (enzyme) adds RNA nucleotides to one strand of DNA Promoters in DNA sequence tell enzymes where gene begins Single stranded pre-mRNA leaves, DNA strands rejoin
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Transcription
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RNA Processing pre-mRNA contains:
Introns – nonsense sequence Exons – expressed sequence Introns are “cut” out and exons are spliced together before mRNA leaves nucleus
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RNA Processing
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Translation mRNA message is translated into an amino acid (protein) sequence Every 3 RNA bases = one amino acid Called a codon (there are 64!) mRNA attaches to ribosome in cytoplasm tRNA matches codon with amino acid
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tRNA Clover leaf shaped strand of RNA
Has anti-codon at one end and corresponding amino acid at other end Anti-codon pairs with codon on mRNA
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Translation Starts at AUG – start codon
tRNA brings in amino acids for each codon Amino acids attached to growing polypeptide chain (protein) Stops at UAA, UAG, or UGA – stop codons Ribosome helps to position all molecules correctly
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Translation
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Translating the Code
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Practice! DNA mRNA codon Amino Acid ATC TAC GAT CCG UAG Stop! AUG
Start – Methionine CUA Leucine GGC Glycine
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Mutations Gene Chromosomal Point mut. – substitute a single base
Changes one aa Frameshift – insert or delete a single base Changes entire aa sequence from mut. Forward Chromosomal Deletion, Duplication, Inversion, Translocation
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Gene Mutations DNA: TAC GCA TCC mRNA: AUG CGU AGG AA: Met-Arg-Thr
DNA: TAC GTA TCC mRNA: AUG CAU AGG AA: Met-His-Thr Substitution
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Gene Mutations DNA: TAC GCA TGG mRNA: AUG CGU ACC AA: Met-Arg-Thr
DNA: TAT CGC ATG G mRNA: AUA GCG UAC C AA: Ile-Ala-Tyr Insertion
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Gene Mutations DNA: TAC GCA TGG mRNA: AUG CGU ACC AA: Met-Arg-Thr
DNA: TAG CAT GG mRNA: AUC GUA CC AA: Ile-Val-? Deletion
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Chromosomal Mutations
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Causes of Mutations Internal External
Mistakes in DNA replication External Radiation, chemicals, high temps Mutagens: chemicals that cause mut. Mutations in body cells only affect that person Mutations in sex cells can spread throughout a population
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Gene Regulation Genes are turned on or off as needed by the cell
Repressors turn genes off by binding to DNA and preventing RNA polymerase from binding
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