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EUChinaGRID – EU-IndiaGrid - EUMEDGRID Federico Ruggieri – INFN Riunione Referee Bologna 7 Marzo 2007
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EGEE and collaborating projects
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Obiettivi Generali Estensione di EGEE fuori Europa. Disseminazione della Tecnologia Grid gLite. Interoperabilità con Middleware di Grid di altre Regioni. Supporto a comunità applicative già presenti in EGEE: esperimenti LHC, BioMedici. Allargamento a nuove applicazioni e comunità: Scienza della Terra, Archeologia, Medicina, Genetica, Geofisica, Vulcanologia, Sismologia, ecc.
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Specific Support Actions Project Start Date1 Jan 20061 Oct 20061 Jan 2006 Duration24 Months EU contribution~ 1.3 M€~ 1.02 M€1.645 M€ Sedi INFN coinvolte Catania, CNAF, Roma3 Cagliari, Catania, Padova Catania, CNAF, Roma3 (Firenze)
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FP6−2004−Infrastructures−6-SSA-026634 http://www.euchinagrid.org EUChinaGRID
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Participants PartnersThird Parties INFN (Italy) Coordinator UNIVERSITÀ DI ROMATRE – Dip. di Fisica (IT) CERN (CH) ACADEMIA SINICA GRID COMPUTING CENTRE (ASGC), TAIPEI Università di Roma Tre - Dip. di Biologia - (IT) Consortium GARR (IT) GRNET (GR) Jagiellonian University - MC Cracow (PL) Beihang University Beijing (CN) CNIC-CAS – Beijing (CN) IHEP-CAS - Beijing (CN) Peking University – Beijing (CN)
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TEIN2 & ORIENT
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CNGrid
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Monitoring (1) INFN Catania, CNAF, Roma3 Poland GRNet CNIC IHEP
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Monitoring (2)
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Main Achievements A pilot infrastructure using gLite is already working (9 sites). A gateway between gLite (EGEE) and GOS (CNGrid) has been studied and a first implementation is available. IPv6 middleware compatibility study was started and first results are available (web site, code checker). First batch of applications is running (LHC, WISDOM, Late/Early Stage) and others were tested and are about to be deployed (ARGO Data Mover, Rosetta).
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gLite - GOS gateway GOS WMProxy Batch job Extended LCG-CE Batch job GOS Batch job Thread Pool Scheduler Thread Pool Scheduler Pipeline for GLite to GOS Pipeline for GOS to GLite Different colors in pipeline stand for different stages (StageIn, StageOut, … ) Each pipeline has corresponding thread pool and scheduler Extended LCG-CE forwards batch jobs to gateway Extended GOS forwards batch job to gateway Idle thread pool used in scheduler Scheduler executes stage in pipeline using idle thread from thread pool
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Grid Middleware and IPv6 China is deploying the largest production IPv6 network in the world. IPv6 is the natural choice for new generation IP telephony in convergence with Wireless Networking. Grid services should be able to run on the future IPv6 enabled PDA’s, portable phones, etc. A study is under way on Middleware and high level services compatibility with IPv6 -> operational tests of functionality. CNGrid MW (GOS) is mostly based on Java and has now an IPv6 compliant version.
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http://www.euchinagrid.eu/IPv6/ IPv6 Web site
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IPv6 compatibility of Grid middleware A specific task was started in order to investigate if libraries, software and other third-party elements used in gLite and GOS are IPv6 compliant. A compatibility list is available and constantly enlarged and updated.
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Applications (WP4) EGEE supported applications LHC Experiments (ATLAS and CMS). BIOMED Astroparticle Physics: ARGO-YBJ experiment Biology: Never Born Proteins.
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ARGO – YBJ Laboratory Unique High Altitude Cosmic Ray Laboratory (4300 m) Tibet, 90 km North to Lhasa. Chinese-Italian collaboration. The Experiment data rate to be transferred is 250 TB/Year requiring a steady transfer rate of the order of 100 Mbps to Beijing and from there to Italy.
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ARGO-YBJ Data Mover Reliable Data Transfer from Yangbajing 2 Data Repositories (CNAF & IHEP) synchronized via LFC and FTS + custom scripts. User Interface SRM (DPM) FTS LFC local DB YBJ: User Interface SRM (DPM) local DB User Interface SRM (DPM) FTS LFC local DB Figure 5 - ARGO Data Transfer Schema
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The “never born proteins” The number of natural proteins is just an infinitesimal fraction of the theoretically possible ones (Ex., a hydrogen atom vs. the total mass of the universe). There exists an astronomical number of “never born proteins”. Their study can teach us lessons on the principles of protein folding. Have natural proteins special physico-chemical properties? Are there “never born proteins” potentially useful for biotechnological or biomedical purposes?
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Rosetta Early/Late Stage Biological applications Generate “never born protein” sequences database Port protein structure prediction software on grid Develop web tools for non grid trained users KWCWPFASHNDLKVQSQ WYVEPPDTIPPYNKYGTN FIKHCQYIAHMQGDTHFF NRVRMHQLWKIIVDCAY
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A5.2 - Tutorial events EventLocation Date Attendees Long tutorial for site administratorsBeijing 03-05/04/06 27 Long users tutorialBeijing05-07/04/0627 Tutorial for site administratorsRome18-19/04/0625 Users tutorialRome20-21/04/0616 Users tutorial (in Chinese)Beijing15-16/06/0650 Tutorial for users & application developersRome 11-12/09/06 19 Mini-tutorial for site administratorsRome13/09/0632 Users tutorial (in Chinese)Beijing25-26/11/0635 231 Overall 147 users and 84 site administrators trained so far
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Future work Continue in the collaboration with other projects, e.g.: Joint conference with ECHOGRID (Beijing 24-25 April). Cooperation with EGEE and ETICS on IPv6 compliance and interoperability of middleware. Extend the actual basic functionality of the gLite – GOS gateway. Expand the pilot infrastructure: Peking University is going to join in these days; CNGrid nodes will be accessible through the gateway.
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu The EU-IndiaGrid Project Joining European and Indian grids for e-science Alberto Masoni EU-IndiaGrid Project Manager INFN Sezione di Cagliari Meeting Referee INFN-Grid Marzo 2007
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu RUOLO INFN COORDINAMENTO PROGETTO COORDINAMENTO 2 WP: GRID INFRASTRUCTURE e APPLICATION PUNTI RILEVANTI –Guida di un progetto considerato strategico dal Ministero e dalla Commissione Europea per i rapporti con l’India –Supporto alle attività LCG nelle collaborazioni con i partners indiani L’INFN ha un MOU con il BARC su sviluppo di grid middleware L’INFN ha collaborazioni consolidate con i partners Indiani di ALICE e CMS sulle attivita’ di Computing La commissione EU e’ disponibile a contribuire ad un incremento del link intercontinentale in funzione di una collaborazione EU-India giustificata da questo progetto –Contributo finanziario per INFN: 278 K-EUR su circa 1 M-EUR totali
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu SEDI COINVOLTE CAGLIARI project management (Alberto Masoni) project office (Hikaru Ikeda 100% funded) attivita’ sulle application HEP (Daniele Mura + borsista indiano su grid technologies) CATANIA dissemination and training (1 FTE funded dal progetto da Maggio + almeno 1 FTE dal GILDA team) PADOVA coordinamento WP Pilot grid infrastructure (Sergio Fantinel 100% funded) coordinamento WP applications (Marco Verlato 30%) Supporto project office e dissemination (Diana Cresti) + 1 FTE 100% funded dal Settembre 07 su grid infrastructure & applications
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu Project Status @ month 5 First Project Workshop, focused on High Energy Physics Applications –Mumbai December 1-4 2006 jointly organized with the WLCG Tier2 in Asia Workshop –Over 100 registered participants Boost for all project activities –Building an eScience Network Community –Network Planning & Support –Pilot grid infrastructure operational support –Applications –Dissemination
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu Highlights Start October 2006, kick-off meeting at ICTP 1° Project workshop, Mumbai December 2006 Network: –Opening of GEANT-ERNET link Milan-Mumbai - October 2006 –Access from GARUDA Indian National Grid Infrastructure to GEANT – January 07 Grid Infrastructure –First steps towards National Indian CA –Creation of a Pilot testbed –First step towards grids interoperability Applications –First steps towards running applications on pilot testbed Dissemination: –1° training event in Mumbai December 2006 –EU-IndiaGrid portal open for registration – January 2007 –over 250 people from 200 Institutions registered in the EU-IndiaGrid database in one month –Several hundreds contacts reached through participation to Conferences –Thousands contacts reached through press releases
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu Pilot Testbed
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EU-IndiaGrid (RI-031834) is funded by the European Commission under the Research Infrastructure Programme www.euindiagrid.eu Next Steps Towards strengthening and enlarging the collaboration Towards Indian National Certification Authority recognized internationally Toward an EU-IndiaGrid testbed involving all sites Towards an operational service for Applications Towards GARUDA-gLite interoperability
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FP6−2004−Infrastructures−6-SSA-026024 [ Empowering e Science across the Mediterranean ] www.eumedgrid.org EUMEDGRID
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FP6−2004−Infrastructures−6-SSA-026024 Participants PartnersThird Parties INFN (Italy) Coordinator Universit à di Messina – Dipartimento di Matematica (IT) CERN (Switzerland) Dipartimento di Fisica – Universit à di RomaTre (IT) CYNET (Cyprus) ICTP – (IT) DANTE (UK) CRS4 – (IT) GARR (Italy) IUCC (Inter University Computing Center) – ISRAEL GRNET (Greece)Institute of Communication and Computer Systems, Athens, Greece RED.ES (Spain)JUNet, Jordan University of Malta (Malta)PADI2, Palestine CERIST (Algeria) CNRST (Morocco) EUN (Egypt) HIAST (Syria)Laboratoire CRISTAL - Ecole Nationale des Sciences de l'Informatique (TU) MRSTDC (Tunisia) Research Unit of Technologies of Information and Communication -University of Tunis (TU) TUBITAK-ULAKBIM (Turkey)Bilkent University (TK)
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FP6−2004−Infrastructures−6-SSA-026024 Strategies (TOP-DOWN) Foster the creation of National Grid Initiatives (NGIs) in the Med Countries → promote the creation of sustainable national grid infrastructures with production quality level. Deploy first those applications which are already grid- enabled and/or easy to be ported (LHC, WISDOM). (BOTTOM-UP) Discover and support New User Communities which will be the driving force of constant expansion and evolution of the Grid Infrastructures → stimulate new demanding application to be deployed and support NGIs creation. Discover and support new applications which are relevant for the Region (Earth Science, Archaeology, etc.).
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FP6−2004−Infrastructures−6-SSA-026024 EUMEDCONNECT Network
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FP6−2004−Infrastructures−6-SSA-026024 The EUMEDGRID e-Infrastructure MA-GRID INFN -Roma3 INFN -Catania INFN - CNAF ULAKBIM CYNET IUCC GRNET Un. of Tunis Un. of Malta ERI
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FP6−2004−Infrastructures−6-SSA-026024 Monitoring
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FP6−2004−Infrastructures−6-SSA-026024 The “spread” of Knowledge: geo-distribution of training events 2 2 2 2 2 1
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FP6−2004−Infrastructures−6-SSA-026024 New Applications & Communities https://secure.um.edu.mt/eumedgrid/questionnaire/wp4/ Questionnaire
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FP6−2004−Infrastructures−6-SSA-026024 First EUMEDGRID School for Application Porting (EGSAP-1) Date: 16-27 April 2007 Venue: Cairo (Egypt) based both on lectures and hands-on practices. the number of applications to be ported will be limited. Applications proposals must be submitted before the 11th of March 2007.
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FP6−2004−Infrastructures−6-SSA-026024 Already Deployed Applications CODESA-3D (Earth Science) It is a three-dimensional finite element simulator for coupled flow and density dependent transport in variably saturated porous media. Requires data from: Geology, Topography, Meteorology, Water extraction, Aquifer properties, Soil maps, Land use. ArchaeoGrid (Multi-disciplinar) Paleoclimate simulation (with modern tools like MM5) Aims at studying the origin of the City in the Mediterranean Region between X-VIII Centuries B.C.
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FP6−2004−Infrastructures−6-SSA-026024 Grid-enabled Subsurface Hydrology application in the Mediterranean area Sustainable management of groundwater exploitation using Monte Carlo simulation of seawater intrusion in the Korba aquifer (Tunisia). Seawater intrusion in the aquifer is a very severe problem in some of the coastal zones of the Med Area. Data requirement Geology Topography Meteorology Water extraction by the farmer Aquifer properties Soil maps Land use A A' Korba
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FP6−2004−Infrastructures−6-SSA-026024 ArchaeoGRID (1) Aerial photo or satellite image DEM Land use Infrastructures Archaeological sites WHERE Archaeological data are geospatial data Archaeological GIS Best resolution X,Y < 1 m Z < 0.1 m (SAR ) How many layers ? Number of layers large, depending from the complexity of the archaeological problem Best resolution by Differential GPS X,Y,Z ˜ few cm
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FP6−2004−Infrastructures−6-SSA-026024 ArchaeoGrid (2) WHEN Archaeological data must be ordered by time Archaeological GIS + time 1000 B.C. 500 B.C. 500 A.D. ~20 years, most precise resolution in time
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FP6−2004−Infrastructures−6-SSA-026024 BioMed Applications EUMEDGRID supported the WISDOM data challenge on it’s infrastructure. WISDOM is an initiative for Grid-enabled drug discovery against neglected and emergent diseases, using GRIDs for in Silico Drug discovery. Simulation of docking of compounds on proteins.
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Conclusioni EUChinaGRID EU-IndiaGRID and EUMEDGRID stanno promuovendo l’uso di Grid nelle aree geografiche di interesse. EUChinaGRID ha un peso tecnico maggiore (IPv6, Interoperabilità). EU-India ha contenuti tecnici (interoperabilità) e di promozione. EUMEDGRID è molto focalizzato sulla diffusione della tecnologia, la creazione di infrastrutture nazionali e nella collaborazione scientifica nell’area mediterranea. EUChinaGRID ed EUMEDGRID hanno passato con successo la prima review il 27-28 Febbraio a Madrid. Il campo delle applicazioni si sta allargando.
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