Current EFR synthesis database design Sites Site web sites Contacts Site disclaimers & agreements Status of data Basins Disturbances Disturbance details.

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Presentation transcript:

Current EFR synthesis database design Sites Site web sites Contacts Site disclaimers & agreements Status of data Basins Disturbances Disturbance details Names Standardized methods Labs Equipment Methods Discharge Data tables Chemistry parameters tables Chem data – instantaneous concentrations Chem data – integrated & aggregated concentrations Samples - instantaneous Samples – integrated & aggregated Chem data – fluxes

Current EFR synthesis database design

Notes -This is a draft designed with one-time synthesis/analysis in mind – thus, this is a starting point for HydrochemDB, not an end point -This is a draft for the underlying data storage only – this does not include any design elements for the format in which users would retrieve data from a public web site -We are reviewing several other aquatic chemistry databases for design ideas and potential compatibility (e.g., using the same parameter names or codes): -USGS NWIS & USGS WATSTORE -NADP -Watershed Monitoring & Analysis Database (Carlton et al. 2004) -NWQMC data elements guidelines

Standardizing data & issues of comparability Converting to standard units -clear labeling of original units -nitrate as nitrogen, NO 3 -N (mg N/L) vs nitrate as nitrate, NO 3 (mg NO 3 /L) ***NO 3 (mg/L) is ambiguous*** -pre-population vs. stored procedures Methods -documenting lab & field methods -standard & distinct parameter names Time steps / aggregation methods Detection limits Nitrate Ammonium Dissolved Kjeldahl Nitrogen Total Kjeldahl Nitrogen (unfiltered) Total Dissolved Nitrogen Total Nitrogen (unfiltered) Soluble Reactive Phosphorus Orthophosphate measured by IC Total Dissolved Phosphorus Total Phosphorus (unfiltered) Dissolved Organic Carbon Total Organic Carbon Dissolved Inorganic Carbon Calcium Potassium Magnesium Sodium Sulfate Chloride Silica Bicarbonate Carbonate ANC/alkalinity pH Hardness Conductivity Total Aluminum preliminary list

SiteSampleParameterValue Below detection value Luquillo1Nitrate0.3 Luquillo1Ammonium0.02 Luquillo2Nitrate<0.005 Luquillo2Ammonium0.01 Coweeta3Nitrate0.2 Coweeta3Ammonium0.01 Coweeta4Nitrate<0.005 Coweeta4Ammonium0.02 Coweeta5Nitrate<0.001 Coweeta5Ammonium<0.002 Detection limits Excerpt from current database design – ideal example (not real data)

Bonanza/ Caribou- PokerDidn’t sendFile contains zeros CoweetaSent current detection limits? File contains zeros and values below these limits; yet aggregated data Do the detection limits sent apply to historic data? FernowSent current detection limits? Ammonium data, which is consistently below their detection limit, was not sent Do the detection limits sent apply to historic data? Fraser Sent detailed file of lab’s detection limits since 1987 File contains zeros, “-0-” and values below those limitsDetection limits prior to 1987? H.J. AndrewsBelow detection flagged since 1991 File doesn’t say what those detection limits are; file contains flagged zeros and numbers above zeroDetection limits prior to 1991? Hubbard BrookNo detection limits sent/given File does flag null values; aggregated data – detection limits may be moot Luquillo Detailed clarification of detection limit treatment over File gives below detection values as ½ the detection limit Site chemist has gone through a thorough process of estimating historic unknown detection limits Marcell Deleted below detection values from data sent – re-doing data file San Dimas Detection limit for nitrate always well exceeded? Santee Sent detailed detection limit information Historic data includes zeros; recent below detection data characterized with <detection limit coding Listed dates of unknown detection limits & dates which they are looking for documentation Tenderfoot Data is characterized with <detection limit coding (e.g., <0.02, <0.005) Detection limits The reality

- Prototype database & details on metadata and detection limits to jumpstart discussion - Level of standardization necessary for EFR synthesis depends on goals/analyses - Issues with metadata and common formats become bigger with a ChemDB Database design & data standardization summary