Consortium for the Barcode of Life

Slides:



Advertisements
Similar presentations
Convention on International Trade in Endangered Species (CITES)
Advertisements

- Unit VI - IAS Specimen Collection, Identification, and Preservation Rebecca M. Westbrooks Randy G. Westbrooks Steven Manning Global Invasive Species.
Robert Hanner, PhD Database Working Group Chair, CBOL Global Campaign Coordinator, FISH-BOL Associate Director, Canadian Barcode of Life Network Biodiversity.
Aims to establish a catalogue of all organisms (10-30 million species) Ultimately a small portable hand held device will be used to identify samples using.
DNA Barcoding of Pacific Invasive and Pest Species Pacific Science Congress Kuala Lumpur David E. Schindel, Executive Secretary National Museum of Natural.
Catalogue of Life, Reading, UK, 29 March 2007 Consortium for the Barcode of Life (CBOL): Linking Molecules to the Catalogue of Life David E. Schindel,
DNA Barcodes: Linking GenBank records to Museum Specimens David E. Schindel, Executive Secretary, CBOL Robert Hanner, University of Guelph.
(COMISION PERMANENTE DEL PACIFICO SUR) THE PERMANENT COMMISSION FOR THE SOUTH PACIFIC (
All Birds Barcoding Initiative (ABBI) goal: create DNA barcode library for world birds.
Data Analysis Working Group, DIMACS, 26 Sept 2005 DNA Barcoding and the Consortium for the Barcode of Life David E. Schindel, Executive Secretary National.
Way Forward Resources: –Sense of urgency, willingness to collaborate –Species richness –Unevenly distributed expertise, collections; some strengths –Workforce.
ABBI/FISH-BOL meeting, Buenos Aires, March 2007 Overview of DNA Barcoding David E. Schindel, Executive Secretary Consortium for the Barcode of Life National.
BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources Jeongheui Lim Korean BioInformation Center Korea Research.
Dan Masiga Molecular Biology and Biotechnology Department International Centre of Insect Physiology and Ecology, Nairobi, Kenya BARCODE Data Standard The.
Consortium for the Barcode of Life A rapid, cost-effective system for species identification David E. Schindel, Executive Secretary National Museum of.
Species Identification, Regulatory Agencies and DNA Barcoding David E. Schindel, Executive Secretary National Museum of Natural History Smithsonian Institution.
Biodiversity Chapter 10.
Regional Workshop 5: Improving Methods for Regional Aquaculture Development and Promotion Podgorica, October 2014 FAO Technical Cooperation Programme.
DNA Barcoding – Southern African Experience Michelle van der Bank.
DNA Barcoding Amy Driskell Laboratories of Analytical Biology
RAPID ASSESSMENT PROGRAM (RAP) Terrestrial Ecosystems Freshwater Ecosystems Marine Ecosystems.
Scott Miller – SANBI, 7 April 2006 Overview of DNA Barcoding and the Barcode of Life Initiative Scott E. Miller, Chair, CBOL Executive Committee National.
PSI Tahiti, 6 March 2009 Access and Benefit Sharing in Non-Commercial Research David E. Schindel, Executive Secretary National Museum of Natural History.
Committees Katia Black Period 6 th House standing Committees Agriculture Transportation and infrastructure Education and the workforce Resources.
Census of Marine Life, Amsterdam – 16 May 2006 The Protocol Chain for DNA Barcoding Projects.
Collecting Fishes for Science An African View. Ethics Common sense – health and safety Collections and ‘Bioprospecting’ Biodiversity Informatics – “knowledge.
CToL Workshop Grahamstown, November 2008 Biomaterials collections and curation in Africa Gavin Gouws & Unathi Lwana South African Institute for Aquatic.
South/Central America Regional Meeting, Campinas, Brazil, 19 March 2007 Overview of Consortium for the Barcode of Life (CBOL) David E. Schindel, Executive.
Freek T. Bakker Nationaal Herbarium Nederland Wageningen University branch DNA barcoding: the CBOL perspective.
A platform for promoting partnerships in taxonomy Eastern Africa Barcode of Life workshop, Nairobi, October 2006 Richard Smith (Director, Secretariat)
Utah State University – 29 Nov 2006 DNA Barcoding: An Emerging Global Standard for Species Identification Consortium for the Barcode of Life National Museum.
Progress since the February 2005 London DNA Barcode of Life Conference Scott Miller, Chair Consortium for the Barcode of Life Smithsonian Institution.
Introduction to the Consortium for the Barcode of Life (CBOL) Scott Miller Smithsonian Institution and Consortium for the Barcode of Life.
Aspects for Improving the ABBI Patricia Escalante Instituto de Biología UNAM AOU-Collections Committee member.
1 Biodiversity. 2 BIODIVERSITY Includes a variety of factors  Genetic Diversity  Species Diversity - Species Richness - Total number of species in a.
Muthama Muasya University of Cape Town Application of DNA barcoding in plant taxonomy, Eastern Africa Experience.
Fish Trade, Safety, Quality and Environmental issues Lahsen Ababouch Service Chief Fish Utilization and Marketing Department of Fisheries FAO, Rome. UNCTAD.
National Science Foundation – 7 February 2006 Consortium for the Barcode of Life (CBOL) David E. Schindel, Executive Secretary National Museum of Natural.
Eastern Africa Regional Meeting, Nairobi, 18 October 2006 DNA Barcoding and the Consortium for the Barcode of Life (CBOL) Status in 2006, Ambitions for.
Global Biodiversity Information Facility GLOBAL BIODIVERSITY INFORMATION FACILITY DNA Barcoding in Southern Africa Cape Town 7 April
Consortium for Barcode of Life (CBOL) Eastern Africa Conference, Nairobi, Kenya, October 2006 EAFRINET LOOP as a CBOL Partner in the Eastern Africa.
DNA Barcoding and the Consortium for the Barcode of Life Katie Ferrell, Project Manager National Museum of Natural History Smithsonian Institution
Animal Groups Your Name.
DNA Barcoding and the Consortium for the Barcode of Life Scott Miller Smithsonian Institution
16.5 Conservation The timber industry has started to adopt sustainable practices. Global fisheries have adopted several sustainable practices. –rotation.
Convention on International Trade in Endangered Species (CITES) Drafted on March 3, 1973 Amended on June 22, 1979 Created By, Nicole Gerard Period 6.
1 Biodiversity. 2 BIODIVERSITY Includes a variety of factors  Genetic Diversity – genetic variability within a species  Species Diversity – variety.
Linking Barcode Data to Multiple Users David E. Schindel, Executive Secretary National Museum of Natural History Smithsonian Institution
The BARCODE Data Standard: CBOL’s Partnership with the International Nucleotide Sequence Database Collaboration (INSDC) David E. Schindel, Executive Secretary.
Protective Agencies Natural Resources Unit Nontraditional Agriculture.
Preparations for CITES COP 17 1 CONFIDENTIAL. OUTLINE Background information Hosting of CITES CoP 17 Possible agenda items & proposals to the 17 th CoP.
National and regional good practices in seafood traceability in Asia to combat IUU fishing March 2016 Kochi, India.
Genetically Modified Organisms GMOs. Technologies that alter the genetic make-up of living organisms such as animals, plants and bacteria. Altering the.
“The EUNIS habitat classification, governance and future developments”
The Endangered Species Act
Sustainable development manages resources for present and future generations.
Sustainable development manages resources for present and future generations.
Sustainable development manages resources for present and future generations.
Scanning the environment: The global perspective on the integration of non-traditional data sources, administrative data and geospatial information Sub-regional.
The Endangered Species Act-1988 Amendment
Natural Resources Unit Nontraditional Agriculture
 .
Sustainable development manages resources for present and future generations.
Sustainable development manages resources for present and future generations.
Sustainable development manages resources for present and future generations.
Evolutionary Trees.
Biodiversity.
Evolution and Natural Selection
Sustainable development manages resources for present and future generations.
Sustainable development manages resources for present and future generations.
Presentation transcript:

Consortium for the Barcode of Life Promoting a standardized global system for identifying species 170+ Member organizations, 50+ countries 35+ Member organizations from 25+ developing countries Characterized 500,000 specimens from 50,000 species

Species Identification Matters Basic research on evolution, ecology Endangered/protected species Agricultural pests/beneficial species Disease vectors/pathogens Invasive species (e.g.,in ballast water) Environmental quality indicators Managing for sustainable harvesting Consumer protection, ensuring food quality Fidelity of seedbanks, culture collections

From specimen to sequence to species Database of Standardized Records How Barcoding is Done From specimen to sequence to species ND3 COIII ND2 ND1 Tissue Sampling DNA extraction Copy CO1 gene DNA sequencing Original DNA Data file Database of Standardized Records Voucher Specimen Museum and Herbarium Collections Frozen Tissue Collections DNA Biobanks Public BARCODE data Links to voucher specimens Links to scientific publications

Outreach Activities CBOL’s regional barcode meetings in: Cape Town, South Africa, April 2006, SANBI Scale insects in African agriculture Nairobi, Kenya, October 2006 Commercial fisheries in Rift Valley lakes Brazil, March 2007 Hardwood tree species Commercial fish Endangered mammals, reptiles, amphibians Taiwan, September 2007 Nigeria, October 2008 CBOL efforts to increase global participation in BOLI

Adoption by Regulators Food and Drug Administration Reference barcodes for commercial fish NOAA/NMFS $100K for Gulf of Maine pilot project FISH-BOL workshop with agencies, Taipei, Sept 2007 Federal Aviation Administration – $500K for birds Environmental Protection Agency $250K pilot test, water quality bioassessment FAO International Plant Protection Commission Proposal for Diagnostic Protocols for fruit flies CITES, National Agencies, Conservation NGOs International Steering Committee, identifying pilot projects US government agencies are now testing barcoding and considering its adoption for regulatory and enforcement purposes.