DNA Sequencing PCR REPLICATION AND ITS APPLICATIONS
DNA REPLICATION IS SEMICONSERVATIVE Confirmed by Messelson- Stahl: hill.com/sites/ /student_view0/chapter14/ animations.html# hill.com/sites/ /student_view0/chapter14/ animations.html#
Begins at specific sites called origins of replication DNA helicase unwinds double helix by breaking H-bonds – forms replication forks Single-stranded binding proteins hold strands open STEPS IN DNA REPLICATION
DNA polymerases add nucleotides to 3’-end of growing DNA strand Synthesis is always in 5’ 3’ direction Requires a RNA primer to build off of DNA primase synthesizes a RNA primer
Strands run in opposite directions Therefore, only 1 strand can replicate toward the replication fork: leading strand Strand replicating away from the fork is called the lagging strand Can only synthesize short pieces at a time Okazaki fragments DNA REPLICATION OCCURS ON BOTH STRANDS AT THE SAME TIME
Synthesis on leading strand is continuous Synthesis on lagging strand requires multiple primers When RNA primer of previous Okazaki fragment is reached, DNA polymerase breaks it down DNA ligase seals Okazaki fragments together hill.com/sites/ /student_view0/cha pter14/animations.html# hill.com/sites/ /student_view0/cha pter14/animations.html#
DNA polymerase proofreads new nucleotides against template If mistake made, DNA polymerase repairs mistake If mistake not corrected, mutation has occurred PROOFREADING
PRO VS. EUKARYOTES Prokaryotes have 1 origin of replication Eukaryotic chromosomes have multiple origins of replication Replication bubbles eventually meet and merge Speeds up process
End of each chromosome is left short, unreplicated strands of DNA These ends are repeating, non-coding sections called telomeres Help to regulate the # of times of cell can divide Cancer cells possess telomerase, which adds repeating sequences to ends of chromosomes TELOMERES
USING REPLICATION IN BIOTECHNOLOGY
Amplifies small amounts of DNA Without cloning Uses nucleotides, primers to replicate DNA sequence hill.com/sites/ /student_view0/chapter 16/animations.html# hill.com/sites/ /student_view0/chapter 16/animations.html# POLYMERASE CHAIN REACTION
Determining the order of bases that make up the genome Requires dideoxynucleotides (ddnt) Stop addition of new nucleotides DNA SEQUENCING