November, 2010 Houston, Texas Tissue Banks and Pathology Tools Workspace Face to Face Center for Biomedical Informatics and Information Technology, National Cancer Institute

Logistics Restrooms: Outside the Phantom Ballroom to your left Wireless: Hotel Wireless: hotelzaza (zenet) password: houston Additional Access Point: caTissue password: password Time: Please refer to the Agenda in your packet. We will try to stay to the times noted. If there are topics that need more discussion than the time allotted, we will mark the discussion for formal follow-up. Thank you for being considerate.

TBPT Team Ian Fore, D. Phil Associate Director, Biorepository and Pathology Informatics Anna Fernandez, Ph.D. TBPT Workspace Lead, Booz Allen Hamilton Beth Leary DiGiulian TBPT Workspace, Booz Allen Hamilton William (Brent) Lander, M.S. TBPT Technical Lead SAIC-F Elizabeth (Libby) Prince TBPT Project Manager, Sapient Government Services Andrew Breychak, PMP TBPT Project Manager, Sapient Government Services Debra Hope, Ph.D. Life Sciences Product Representative, 3 rd Millennium, Inc.

NCI CBIIT Tissue/Biospecimen Knowledge Center Staff Attending David Mulvihill, MT(ASCP), PMP Knowledge Center Operations Manager Mark Watson, M.D., Ph.D. Knowledge Center Director Rakesh Nagarajan, M.D., Ph.D. Knowledge Center Co- Director Bijoy George, MBA, PMP caTissue Development Project Manager Amy Brink Sr. Medical Technologist, Knowledge Center Domain Expert Shehil Gupta Knowledge Center Domain Expert Kunal Kamble Knowledge Center Technical Expert

National Cancer Institute Center for Biomedical Informatics and Information Technology (Non-TBPT Attending) Avinash Shanbhag Director of Core Infrastructure Engineering John Speakman caBIG Chief Program Officer David Hau M.D., M.S. Acting Director, Semantic Infrastructure Robert Shirley Associate Director of Applications Engineering; Project Office and Technical Architect, Imaging workspace; Life Sciences Architect and the Project Officer for the LSLR effort Sherri De Coronado Ph.D., M.B.A. Acting Director, Semantic Services Dianne Reeves, R.N., M.S.N. Director, Biomedical Data Standards

NCI CBIIT Contractors Attending (non TBPT Team) R. Mark Adams, Ph.D. caBIG Program Manager, Booz Allen Hamilton Michael Keller, Ph.D. Architecture Workspace Lead, Booz Allen Hamilton Elaine Freund, Ph.D. ICR Workspace Lead, 3 rd Millennium, Inc. Eve Shalley, Ph.D. Clinical Trials Management Systems Workspace Lead, Essex Corporation Jens Poschet Senior Manager, Essex Corporation Paul Mulhern, MSW Imaging Workspace Lead, Booz Allen Hamilton

Agenda Review – Wednesday Nov 3 Welcome Baylor College of Medicine Keynote Address: Dr. Paul Klotman Community Experience with Open-Source Tools and caTissue Suite Next Iteration of caTissue and NCI Enterprise Services The Common Biorepository Model Laboratory Data Sharing (LIDDEx) Cross Workspace Projects NCI Global Specimen Identifier Service Evening Reception and Application Demonstration

Agenda Review – Thursday Nov 4 Community Connecting caBIG to other Tools Digital Pathology Imaging caBIG Semantic Infrastructure caBIG services Tooling and Benefits Bioinformatics Support of Animal Model Research: overview and working session Closing Comments

Lunch Options Hotel Option: Hotel ZaZa Price Fixed Lunch Available. $18 per person including tax and tip Café Express: Located across the street from Hotel ZaZa on the lower level of the Museum of Fine Arts (corner of Bintz and Main) Hotel Restaurant: Monarch has a full service menu

Map of Attendee Locations: 26 States and 4 Countries Arkansas California Colorado Connecticut Florida Georgia Hawaii Illinois Indiana Kentucky Louisiana Massachusetts Maryland Maine Minnesotta Missouri North Carolina New York Oregon Pennsylvania Rhode Island South Carolina Texas Virginia Washington Wisconsin Leicestershire, UK Maharashtra, India New South Wales, Australia Ontario, Canada

Time Zones Covered by our Attendees 5 am in Honolulu = 10 AM in Houston = 2 AM tomorrow in Sydney, Australia 21 hour difference!

58 Affiliations 3rd Millennium, Inc Albert Einstein College of Medicine Artificial Intelligence In Medicine Inc. Baylor College of Medicine Booz Allen Hamilton Brady Corporation Buckler Biomedical Associates LLC Cancer Research Center of Hawaii City of Hope Dana-Farber Cancer Institute Duke University Emory University Epic Sciences Essex Management Hollings Cancer Center Medical University of South Carolina IMS Indiana University/Regenstrief Institute Johns Hopkins University Kimmel Cancer Center at Thomas Jefferson University Leicester Cardiovascular Biomedical Research Unit Loma Linda Cancer Center Louisiana Cancer Research Consortium Lowy Cancer Research Centre MD Anderson NCI CBIIT Northside Hospital Northwestern University Norton Healthcare NueroTexas Institute Oregon Health Sciences University Our Lady of the Lake Persistent Systems Ltd Regenstrief Institute SAIC-Frederick Saint Joseph Mercy Health System Sapient Government Services SemanticBits Stanford University Texas Children's Cancer Center The Jackson Laboratory Translating Research Across Communities University of Arkansas Medical Sciences University of California, Los Angeles University of California, San Francisco University of Colorado Denver University of Florida University of Hawaii University of Houston Law Center University of Leicester, UK University of Maryland University of Michigan University of Minnesota University of Pennsylvania University of Texas Health Science Center San Antonio University of Texas Medical Branch University of Virginia University of Washington Washington University St. Louis Yale University

Welcome address from Baylor College of Medicine Dr. Paul Klotman, President and CEO, Baylor College of Medicine B.S. degree from the University of Michigan M.D. from Indiana University Associate Professor of Medicine at Duke University Chief of the Molecular Medicine Section in the Laboratory of Developmental Biology at NIH. Chief of the Viral Pathogenesis Laboratory in the NIDR/NIH. Mt. Sinai School of Medicine as the Irene and Dr. Arthur M. Fishberg Professor of Medicine and the chief of the Division of Nephrology. Chair of the Samuel Bronfman Department of Medicine. Baylor College of Medicine President July 2010!

Special Thanks to David Steffen, Ph.D., Director, Bioinformatics Research Center, Baylor College of Medicine Lauren Becnel Boyd, Ph.D., Dan L. Duncan Postdoctoral Fellow, Bioinformatics Research Center, Baylor College of Medicine Jennifer Hopkins, Dan L. Duncan Cancer Center, Conference Coordinator

caTissue Suite Usage Data

Green = samples on the grid Sample Use: Biospecimens Usage: million biospecimens available through caTissue, at least million biospecimens are available for sharing via caGrid 34 organizations in production usage, including:

Known Production and Pilot Instances +Production+and+Pilot+Known+Instances

Introductions Welcome All! Please provide your name, affiliation, and a short description of what you do and your interest in this meeting

Thank you for Attending! Join the caBIG TBPT Listserv to keep abreast of our workspace: You may sign up through list.nih.gov