Chapter 14 Mendel and the Gene Idea

Inheritance u The passing of traits from parents to offspring. u Humans have known about inheritance for thousands of years.

Genetics u The scientific study of the inheritance. u Genetics is a relatively “new” science (about 150 years).

Gregor Mendel u Father of Modern Genetics.

u Mendel was a pea picker. u He used peas as his study organism.

Why Use Peas? u Short life span. u Bisexual. u Many traits known. u Cross- and self-pollinating. u (You can eat the failures).

Cross-pollination u Two parents. u Results in hybrid offspring where the offspring may be different than the parents.

Self-pollination u One flower as both parents. u Natural event in peas. u Results in pure-bred offspring where the offspring are identical to the parents.

Mendel's Work u Used seven characters, each with two expressions or traits. u Example: u Character - height u Traits - tall or short.

Monohybrid or Mendelian Crosses u Crosses that work with a single character at a time. Example - Tall X short

P Generation u The Parental generation or the first two individuals used in a cross. Example - Tall X short u Mendel used reciprocal crosses, where the parents alternated for the trait.

Offspring u F1 - first filial generation. u F2 - second filial generation, bred by crossing two F1 plants together or allowing a F1 to self-pollinate.

Another Sample Cross P1 Tall X short (TT x tt) F1 all Tall (Tt) F2 3 tall to 1 short (1 TT: 2 Tt: 1 tt)

Results - Summary  In all crosses, the F1 generation showed only one of the traits regardless of which was male or female. u The other trait reappeared in the F2 at ~25% (3:1 ratio).

Mendel's Hypothesis 1. Genes can have alternate versions called alleles. 2. Each offspring inherits two alleles, one from each parent.

Mendel's Hypothesis 3. If the two alleles differ, the dominant allele is expressed. The recessive allele remains hidden unless the dominant allele is absent. Comment - do not use the terms “strongest” to describe the dominant allele.

Mendel's Hypothesis 4. The two alleles for each trait separate during gamete formation. This now called: Mendel's Law of Segregation

Law of Segregation

Vocabulary u Phenotype - the physical appearance of the organism. u Genotype - the genetic makeup of the organism, usually shown in a code. u T = tall u t = short

Helpful Vocabulary u Homozygous - When the two alleles are the same (TT/tt). u Heterozygous- When the two alleles are different (Tt).

6 Mendelian Crosses are Possible Cross Genotype Phenotype TT X tt all Tt all Dom Tt X Tt 1TT:2Tt:1tt 3 Dom: 1 Res TT X TT all TT all Dom tt X tt all tt all Res TT X Tt 1TT:1Tt all Dom Tt X tt 1Tt:1tt 1 Dom: 1 Res

Test Cross u Cross of a suspected heterozygote with a homozygous recessive. u Ex: T_ X tt If TT - all dominant If Tt - 1 Dominant: 1 Recessive

Dihybrid Cross u Cross with two genetic traits. u Need 4 letters to code for the cross. u Ex: TtRr u Each Gamete - Must get 1 letter for each trait. u Ex. TR, Tr, etc.

Dihybrid Cross TtRr X TtRr Each parent can produce 4 types of gametes. TR, Tr, tR, tr Cross is a 4 X 4 with 16 possible offspring.

Results u 9 Tall, Red flowered u 3 Tall, white flowered u 3 short, Red flowered u 1 short, white flowered Or: 9:3:3:1

Law of Independent Assortment u The inheritance of 1st genetic trait is NOT dependent on the inheritance of the 2 nd trait. u Inheritance of height is independent of the inheritance of flower color.

Comment u Ratio of Tall to short is 3:1 u Ratio of Red to white is 3:1 u The cross is really a product of the ratio of each trait multiplied together. (3:1) X (3:1)

Probability u Genetics is a specific application of the rules of probability. u Probability - the chance that an event will occur out of the total number of possible events.

Genetic Ratios u The monohybrid “ratios” are actually the “probabilities” of the results of random fertilization. Ex: 3:1 75% chance of the dominant 25% chance of the recessive

Rule of Multiplication u The probability that two alleles will come together at fertilization, is equal to the product of their separate probabilities.

Example: TtRr X TtRr u The probability of getting a tall offspring is ¾. u The probability of getting a red offspring is ¾. u The probability of getting a tall red offspring is ¾ x ¾ = 9/16

Comment u Use the Product Rule to calculate the results of complex crosses rather than work out the Punnett Squares. u Ex: TtrrGG X TtRrgg

Variations on Mendel 1. Incomplete Dominance 2. Codominance 3. Multiple Alleles 4. Epistasis 5. Polygenic Inheritance

Incomplete Dominance u When the F1 hybrids show a phenotype somewhere between the phenotypes of the two parents.(blending) Ex. Red X White snapdragons F1 = all pink F2 = 1 red: 2 pink: 1 white

Result u No hidden Recessive. u 3 phenotypes and 3 genotypes u Red = C R C R u Pink = C R C W u White = C W C W

Another example

Codominance u Both alleles are expressed equally in the phenotype. u Ex. MN blood group u MM u MN u NN

Result u No hidden Recessive. u 3 phenotypes and 3 genotypes

Multiple Alleles u When there are more than 2 alleles for a trait. u Ex. ABO blood group u I A - A type antigen u I B - B type antigen u i - no antigen

Result u Multiple genotypes and phenotypes. u Very common event in many traits.

Alleles and Blood Types Type Genotypes A I A I A or I A i B I B I B or I B i AB I A I B O ii

Comment u Rh blood factor is a separate factor from the ABO blood group. u Rh+ = dominant u Rh- = recessive u A+ blood = dihybrid trait

Epistasis u When 1 gene locus alters the expression of a second locus. u Ex: u 1 st gene: C = color, c = albino u 2 nd gene: B = Brown, b = black

Gerbils

In Gerbils CcBb X CcBb Brown X Brown F1 = 9 brown (C_B_) 3 black (C_bb) 4 albino (cc__)

Result u Ratios often altered from the expected. u One trait may act as a recessive because it is “hidden” by the second trait.

Epistasis in Mice

Polygenic Inheritance u Factors that are expressed as continuous variation. u Lack clear boundaries between the phenotype classes. u Ex: skin color, height

Genetic Basis u Several genes govern the inheritance of the trait. u Ex: Skin color is likely controlled by at least 4 genes. Each dominant gives a darker skin.

Result u Mendelian ratios fail. u Traits tend to "run" in families. u Offspring often intermediate between the parental types. u Trait shows a “bell-curve” or continuous variation.

Genetic Studies in Humans u Often done by Pedigree charts. u Why? u Can’t do controlled breeding studies in humans. u Small number of offspring. u Long life span.

Pedigree Chart Symbols Male Female Person with trait

Sample Pedigree

Dominant Trait Recessive Trait

Human Recessive Disorders u Several thousand known: u Albinism u Sickle Cell Anemia u Tay-Sachs Disease u Cystic Fibrosis u PKU u Galactosemia

Sickle-cell Disease u Most common inherited disease among African-Americans. u Single amino acid substitution results in malformed hemoglobin. u Reduced O 2 carrying capacity. u Codominant inheritance.

Tay-Sachs u Eastern European Jews. u Brain cells unable to metabolize type of lipid, accumulation of causes brain damage. u Death in infancy or early childhood.

Cystic Fibrosis u Most common lethal genetic disease in the U.S. u Most frequent in Caucasian populations (1/20 a carrier).  Produces defective chloride channels in membranes.

Recessive Pattern u Usually rare. u Skips generations. u Occurrence increases with consaguineous matings. u Often an enzyme defect.

Human Dominant Disorders u Less common then recessives. u Ex: u Huntington’s disease u Achondroplasia u Familial Hypercholsterolemia

Inheritance Pattern u Each affected individual had one affected parent. u Doesn’t skip generations. u Homozygous cases show worse phenotype symptoms. u May have post-maturity onset of symptoms.

Genetic Screening u Risk assessment for an individual inheriting a trait. u Uses probability to calculate the risk.

General Formal R = F X M X D R = risk F = probability that the female carries the gene. M = probability that the male carries the gene. D = Disease risk under best conditions.

Example u Wife has an albino parent. u Husband has no albinism in his pedigree. u Risk for an albino child?

Risk Calculation u Wife = probability is 1.0 that she has the allele. u Husband = with no family record, probability is near 0. u Disease = this is a recessive trait, so risk is Aa X Aa =.25 u R = 1 X 0 X.25 u R = 0

Risk Calculation u Assume husband is a carrier, then the risk is: R = 1 X 1 X.25 R =.25 There is a.25 chance that every child will be albino.

Common Mistake u If risk is.25, then as long as we don’t have 4 kids, we won’t get any with the trait. u Risk is.25 for each child. It is not dependent on what happens to other children.

Carrier Recognition u Fetal Testing u Amniocentesis u Chorionic villi sampling u Newborn Screening

Fetal Testing u Biochemical Tests u Chromosome Analysis

Amniocentesis u Administered between weeks. u Extract amnionic fluid = cells and fluid. u Biochemical tests and karyotype. u Requires culture time for cells.

Chorionic Villi Sampling u Administered between weeks. u Extract tissue from chorion (placenta). u Slightly greater risk but no culture time required.

Newborn Screening u Blood tests for recessive conditions that can have the phenotypes treated to avoid damage. Genotypes are NOT changed. u Ex. PKU

Newborn Screening u Required by law in all states. u Tests 1- 6 conditions. u Required of “home” births too.

Multifactorial Diseases u Where Genetic and Environment Factors interact to cause the Disease.

Ex. Heart Disease u Genetic u Diet u Exercise u Bacterial Infection