Regulation of ORMDL3 Gene Expression through the ERK/CREB Pathway Annie Vo.

Slides:



Advertisements
Similar presentations
Regulation of ORMDL3 Gene Expression through the ERK/CREB Pathway Annie Vo.
Advertisements

MAP Kinase family regulates the nuclear localization of Nrf2 By: Ngan Nguyen Tory Hagen Linus Pauling Institute.
Methods: IP/WB Combination Purpose: to identify binding partners for a protein (e.g., integrin alpha6) Method: Immunoprecipitate integrin alpha6, using.
DNA Methylation in Histone H3.3 Lysine to Methionine Mutants Ellie Degen with Stefan Lundgren, Siddhant Jain and Dr. Peter W. Lewis UW Department of Biomolecular.
Western Blotting.
WHAT IS A WESTERN BLOT?.
Results 1.Miller JR, Siripurkpong P, Hawes J, Majdalawieh A, Ro HS, McLeod RS. The trans-10, cis-12 isomer of conjugated linoleic acid decreases adiponectin.
Supplemental figure 1: Correlation coefficients between signal intensities from biological replicates of wild.
Computational biology of cancer cell pathways Modelling of cancer cell function and response to therapy.
Role of Mitogen-activated Protein Kinase Phosphatase During the Cellular Response to Gentoxic Stress :Inhibition of c-Jun N-Terminal Kinase Activity and.
It's usually difficult to identify a protein of interest in a Commassie Blue-stained gel of cell extracts Coomassie Blue-stained gel MW stds. Cell extracts.
Western Blot Megan Sova Stacie Huffmon Beth Meyer.
Background Western Blot Semi-Quantitative Analysis of Non-Canonical cAMP-Dependent Protein Expression Induced by PACAP Emily Jones with Yvonne Holighaus.
Is Phosphorylation of Calretinin a Mechanism for Ca 2+ Regulation at Synapses? Erika Marulanda O’Day Lab SPUR 2005.
The goal of this project was to see if a hormone that prevents brain cells from dying could protect cells through a previously unknown pathway. We also.
CHAPTER 11 CELL COMMUNICATION Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings Section C: Signal-Transduction Pathways 1.Pathways.
PROTEIN KINASE C  MEDIATES ETHANOL-INDUCED UP-REGULATION OF L-TYPE CALCIUM CHANNELS Journal of Biological Chemistry Vol. 273 No. 26 pp –
Measuring PDE4A and PDE4B in Normal and Diseased Mouse Leg Muscle Jessica Hall & Brittany Matthews 1 June 2001.
Tight junctions are intercellular adhesion complexes that connect epithelial cells and thus prevent leakage between cells. They are made of tight junction.
Defining Epidermal Growth Factor Receptor exon 20 mutant sensitivity to tyrosine kinase inhibition Danny Rayes.
Measurement of the p38 signaling pathway in the Pro253Arg mutation of FGFR2 in Apert syndrome Kaivalya Dandamudi.
Measurement of the p38 signaling pathway in the Pro253Arg mutation of FGFR2 in Apert syndrome Kaivalya Dandamudi.
Dietary cancer-chemopreventive compounds: from signaling and gene expression to pharmacological effects  Chi Chen, Ah-Ng Tony Kong  Trends in Pharmacological.
IL-18 Downregulates Collagen Production in Human Dermal Fibroblasts via the ERK Pathway  Hee Jung Kim, Seok Bean Song, Jung Min Choi, Kyung Moon Kim,
Regulation of Oxidative Stress Responses By PEBP1-dependent Autophagy
Research, 2016, Vol. 4, No. 1, doi: /jfnr-4-1-6
SOUTHERN BLOTTING Ali Zaeri Medical Genetics and diagnostic lab Lab 5.
The Role of Transcription Factor PU
Roles of the cytoplasmic domains of the α and β subunits of human granulocyte- macrophage colony-stimulating factor receptor  Akihiko Muto, PhDa, Sumiko.
Volume 41, Issue 2, Pages (January 2011)
Early aldosterone up-regulated genes: New pathways for renal disease?
Differential influence of tyrosine residues of the common receptor β subunit on multiple signals induced by human GM-CSF  Tohru Itoh, PhD, Rui Liu, MSc,
Figure 2 Molecular pathways involved in the regulation of T-cell differentiation and cytokine production Figure 2 | Molecular pathways involved in the.
Jennifer L. Ingram, PhD, Monica Kraft, MD 
Severe asthma: Advances in current management and future therapy
Istvan Arany, Judit K. Megyesi, Jane E.B. Reusch, Robert L. Safirstein 
Sp1 Is Required for Glucose-Induced Transcriptional Regulation of Mouse Vesicular Glutamate Transporter 2 Gene  Tao Li, Liqun Bai, Jing Li, Suzu Igarashi,
IL-17 enhances the migration of B cells during asthma by inducing CXCL13 chemokine production in structural lung cells  Roua Al-Kufaidy, MS, Alejandro.
The IL-17F signaling pathway is involved in the induction of IFN-γ–inducible protein 10 in bronchial epithelial cells  Mio Kawaguchi, MD, Fumio Kokubu,
Toluene downregulates filaggrin expression via the extracellular signal-regulated kinase and signal transducer and activator of transcription–dependent.
Evidence for JNK-dependent up-regulation of proteoglycan synthesis and for activation of JNK1 following cyclical mechanical stimulation in a human chondrocyte.
IGF-II-Mediated COX-2 Gene Expression in Human Keratinocytes Through Extracellular Signal-Regulated Kinase Pathway  Hye Jung Kim, Tae-Yoon Kim  Journal.
Volume 65, Issue 6, Pages (June 2004)
Cell-Density-Dependent Regulation of Expression and Glycosylation of Dopachrome Tautomerase/Tyrosinase-Related Protein-2  Thomas J. Hornyak, Daniel J.
Xue-Hui Liu, Achim Aigner, Anton Wellstein, Patricio E. Ray 
Silvia Bolland, Roger N Pearse, Tomohiro Kurosaki, Jeffrey V Ravetch 
Volume 17, Issue 6, Pages (December 1996)
Volume 128, Issue 4, Pages (April 2005)
Glucocorticoid actions on airway epithelial responses in immunity: Functional outcomes and molecular targets  Cristiana Stellato, MD, PhD  Journal of.
Does reduced zona pellucida binding protein 2 (ZPBP2) expression on chromosome 17q21 protect against asthma?  Marina Miller, MD, PhD, Christine Vuong,
Eosinophil production of prostaglandin D2 in patients with aspirin-exacerbated respiratory disease  Xin Feng, MD, Madison K. Ramsden, BS, Julie Negri,
Activation of Akt as a Mechanism for Tumor Immune Evasion
Molecular Therapy - Methods & Clinical Development
Human Keratinocytes Respond to Osmotic Stress by p38 Map Kinase Regulated Induction of HSP70 and HSP27  M. Garmyn, A. Pupe  Journal of Investigative Dermatology 
Roles of the cytoplasmic domains of the α and β subunits of human granulocyte- macrophage colony-stimulating factor receptor  Akihiko Muto, PhDa, Sumiko.
IL-18 Downregulates Collagen Production in Human Dermal Fibroblasts via the ERK Pathway  Hee Jung Kim, Seok Bean Song, Jung Min Choi, Kyung Moon Kim,
Roflumilast N-oxide reverses corticosteroid resistance in neutrophils from patients with chronic obstructive pulmonary disease  Javier Milara, PhD, PharmD,
Volume 6, Issue 6, Pages (June 1997)
BLNK Required for Coupling Syk to PLCγ2 and Rac1-JNK in B Cells
Cockroach proteases increase IL-8 expression in human bronchial epithelial cells via activation of protease-activated receptor (PAR)–2 and extracellular-signal-regulated.
Silva H Hanissian, Raif S Geha  Immunity 
GF103209X attenuates PKC, MEK and ERK 1/2 phosphorylation in laminarin-challenged haemocytes. GF103209X attenuates PKC, MEK and ERK 1/2 phosphorylation.
Eosinophil production of prostaglandin D2 in patients with aspirin-exacerbated respiratory disease  Xin Feng, MD, Madison K. Ramsden, BS, Julie Negri,
Identification and characterization of a novel allergen from Blomia tropicalis: Blo t 21  Yun Feng Gao, BEng, De Yun Wang, MD, PhD, Tan Ching Ong, PhD,
CML-HSA treatment activates MAPK family members ERK1/2 and p38 but not JNK. Samples were taken at the indicated times after 100 μg/ml CML-HSA exposure.
Larry D. Alexander, Suganthi Alagarsamy, Janice G. Douglas 
p65 depletion increases basal protein aggregation and insolubilization
Li Ni-Komatsu, Seth J. Orlow  Journal of Investigative Dermatology 
N-Terminal Palmitoylation of PSD-95 Regulates Association with Cell Membranes and Interaction with K+ Channel Kv1.4  J.Rick Topinka, David S Bredt  Neuron 
Expression and induction of HER2 and HPSE in 231BMBC cells.
Presentation transcript:

Regulation of ORMDL3 Gene Expression through the ERK/CREB Pathway Annie Vo

ORMDL3 Orosomucoid 1-like 3 Associated with onset of childhood asthma Expressed in bronchial epithelial cells Encodes a trans-membrane protein Pump that regulates calcium ions into the sacro- endoplasmic reticulum Imbalance of calcium ions increase the unfolded protein response Causes upregulation of inflammatory factors Figure 1 Location of ORMDL3. Gene is found on the long arm (q) of chromosome 17.

Asthma Over 150 genes associated with asthma Chronic inflammatory disease 5-16% of the world population afflicted Equates to about 300 million people Still increasing every year Figure 2 Asthma in the U.S from 2001 to A slight increase in asthma prevalence in various groups evidence in recent years. Children are consistently the biggest population in the total count.

Vitamin A Supplementation Lowered amounts found in asthmatic patients Supplementation would enhance maintenance Instead, increased inflammatory factors Mechanism not fully understood Zhuang et al. (2013) proposed a mechanism by which vitamin A increased the onset of asthma. Figure 3 Sources of Vitamin A. Possible means of regulating asthmatic symptoms through dietary control.

New Pathway All-trans retinoic acid (metabolite of vitamin A) Activates PKA ATRA Protein kinase A Phosphorylates CREB PKA cAMP response-element binding protein Initiates transcription of ORMDL3 CREB Gene associated with childhood asthma ORMDL3

Findings Figure 4 CREB Phosphorylation via ATRA. Western blot shows that CREB is phosphorylated when ATRA and PKA are present, but not when PKA is absent. A PKA inhibitor, H-89, was used t prevent interactions with PKA. Adapted from Zhuang et al. (2013). Figure 5 Expression of ORMDL3 Protein. Blot within box shows that protein is expressed when both ATRA and PKA are present. β-tubulin is used as the loading control. Adapted from Zhuang et al. (2013).

Experiment mouse fibroblast (NIH3T3) human bronchial epithelial (BEAS-2B) alveolar lung epithelial (A549) PKA α-PKA ERK1/2 α-ERK1/2 α-PKA Aggarwal et al. (2006) found three other kinases to be CREB activators Extracellular signal- regulated kinase-1 and 2 (ERK1/2) was one. Will ORMDL3 also be expressed when another kinase, ERK1/2, is present?

Overview of Western Blot 1.Prepare cells with inhibitors, if necessary 2.Incubate cells with ATRA 3.Lyse cells and collect protein 4.Separate proteins using gel electrophoresis. 5.Transfer proteins onto membrane via electroblotting 6.Block membrane interactions with proteins using a buffer. 7.Detect for proteins by incubating membrane in ORMDL3 antibodies. 8.Incubate with secondary near-infrared antibody. 9.Measure luminescence using the Odyssey System with Infrared.

Gel Electrophoresis Figure 6 Gel Electrophoresis. The protein extract are run through a gel, which is negatively-charged. The proteins move towards the positive end of the plate, with smaller proteins moving further alone.

Electroblotting Figure 7 Transfer from Gel to Membrane. The gel and membrane are place next to each other and then surrounded with filter paper and sponges. A current is run through, moving from the gel to the membrane, allowing the proteins to move onto the membrane in the same order that they were in on the gel.

Detecting for Protein Figure 8 Probing with Antibodies. The membrane will be incubated with ORMDL3 antibodies. Because the antibody is a goat polyclonal antibody, a near-infrared antibody against the goat polyclonal will be used to detect the protein. The luminescence will be measured to determine the concentration of the protein in each condition.

Expected Results ORMDL3 expressed when either kinase is present. A kinase must be present for ORMDL3 to be expressed. Figure 9 ATRA-induced ERK1/2 dependent ORMDL3 Expression. ORMDL3 expression is greater when PKA is present due to its affinity for other proteins in the mechanism, such as cAMP. ORMDL3 is not expressed without a kinase present.

Future Uses Application: Regulation of vitamin A intake through diet during childhood years to prevent asthma. Future Questions: Synergistic response when both are present? Why is the amount of protein produced different when varying kinases?

References Allen, S., Britton, J. R., & Leonardi-Bee, J. a. (2009). Association between antioxidant vitamins and asthma outcome measures: systematic review and meta-analysis. Thorax, 64(7), 610–9. Dijk, F. N., de Jongste, J. C., Postma, D. S., & Koppelman, G. H. (2013). Genetics of onset of asthma. Current opinion in allergy and clinical immunology, 13(2), 193–202. GeneLoc. "ORMDL3 Gene in genomic location." GeneCard. Accessed December 5, Ha, S. G., Ge, X. N., Bahaie, N. S., Kang, B. N., Rao, A., Rao, S. P., & Sriramarao, P. (2013). ORMDL3 promotes eosinophil trafficking and activation via regulation of integrins and CD48. Nature communications, 4, Kang, M.-J., Yu, H.-S., Seo, J.-H., Kim, H.-Y., Jung, Y.-H., Kim, Y.-J., … Hong, S.-J. (2012). GSDMB/ORMDL3 variants contribute to asthma susceptibility and eosinophil-mediated bronchial hyperresponsiveness. Human immunology, 73(9), 954–9. Leinco. “Detection in Western Blots." Leinco. Accessed December 5, Leinco. "Western Blot Setup." Leinco. Accessed December 5, Martinez, F. D., & Vercelli, D. (2013). Asthma. Lancet, 382(9901), 1360–72. National Institute of Allergy and Infectious Diseases, National Institutes of Health. Asthma in the U.S. ( Accessed December 2013) The Vitamin Magazine. "Great Sources of Vitamin A." The Vitamin Mag. Accessed December 5, Zhuang, L.-L., Huang, B.-X., Feng, J., Zhu, L.-H., Jin, R., Qiu, L.-Z., & Zhou, G.-P. (2013). All-Trans Retinoic Acid Modulates ORMDL3 Expression via Transcriptional Regulation. PloS one, 8(10), e Zhuang, L.-L., Jin, R., Zhu, L.-H., Xu, H.-G., Li, Y., Gao, S., … Zhou, G.-P. (2013). Promoter characterization and role of cAMP/PKA/CREB in the basal transcription of the mouse ORMDL3 gene. PloS one, 8(4), e60630.