Detecting Proteins that Interact with the Mbp1 Protein Using Yeast Two-Hybrid Analysis Josh McHugh Faculty Mentor: Dr. Dan Herman University of Wisconsin.

Slides:



Advertisements
Similar presentations
Determining the roles of the BTB genes At2g04740, At4g08455, At1g04390, and At2g30600 in Arabidopsis thaliana growth and development. Brandon D. Blaisdell,
Advertisements

Abstract Background Gregory Fischer, Julie Anderson, Daniel Herman  Department of Biology  University of Wisconsin-Eau Claire The yeast species Candida.
Recombinant DNA Technology
Bacterial Transformation
The Role of the Ypd1 Protein in Morphogenesis in Candida albicans Megan Lindner and Dr. Daniel Herman, Research Advisor University of Wisconsin-Eau Claire.
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae Article by Peter Uetz, et.al. Presented by Kerstin Obando.
Protein-protein Interactions Hsueh-Fen Juan 2003, Mar 31 NTNU.
Protein-Protein Interaction Screens. Bacterial Two-Hybrid System selectable marker RNA polymerase DNA binding protein bait target sequence target.
Genetic Technologies By: Brenda, Dale, John, and Brady.
DNA TECHNOLOGY AND THE HUMAN GENOME. MOST DNA TECHNOLOGY IS NATURALLY OCCURING PHENOMENA THAT WE MANIPULATE TO SERVE OUR CURIOUSITY AND INTEREST – BACTERIAL.
Bacteria Transformation
The Role of Candida albicans MBP1 in Yeast Pathogenesis Aric Runzheimer Cody Fisher Dr. Julie Anderson Department of Biology University of Wisconsin–Eau.
DNA Technology and Genomics
Gel Electrophoresis If DNA is millions of base pairs long, how do we get the small fragments that are shown on the gel?  Use Restriction Enzymes.
DNA Technology- Cloning, Libraries, and PCR 17 November, 2003 Text Chapter 20.
Gene Technology Chapters 11 & 13. Gene Expression 0 Genome 0 Our complete genetic information 0 Gene expression 0 Turning parts of a chromosome “on” and.
Model Organisms Honors Genetics Chapter 2 Organism 1.
Protein protein interactions
Trends in Biotechnology
歐亞書局 PRINCIPLES OF BIOCHEMISTRY Chapter 9 DNA-Based Information Technologies.
Localization of the C. albicans MBP1 Gene Product in S. cerevisiae Aric Runzheimer Dr. Julie Anderson Department of Biology University of Wisconsin–Eau.
Yeast as a Model System MBIOS 520/420 September 29, 2005.
Chapter 15: Genetic Engineering
Copyright © 2002 Pearson Education, Inc., publishing as Benjamin Cummings Fig. 18.2a & b.
TEAM 1 Investigation of bacteriophages of the bird pathogen, Bordetella avium.
NIS - BIOLOGY Lecture 57 – Lecture 58 DNA Technology Ozgur Unal 1.
Overview Amgen Biotech Labs In this set of labs, students will:
Biotechnology Biotechnology: The use of microorganisms, cells or cell components to make a product. Genetic Engineering: inserting genes into cells for.
AP Biology DNA Study Guide. Chapter 16 Molecular Basis of Heredity The structure of DNA The major steps to replication The difference between replication,
-Know that we can manipulate genomes by inserting or deleting certain genes. -What about synthesizing an entirely novel genome using sequencing technology?
Biotechnology Techniques
Biotechnology Practice Test. Question #1 An organism’s chromosomes are part of its a) plasmid b) recombinant DNA c) genome d) enzymes.
Cloning of Eukaryotic Elongation Factor 3 from Phytophthora infestans
Background Gregory Fischer Julie Anderson Daniel Herman  Department of Biology  University of Wisconsin-Eau Claire Heterologous expression of MBP1 from.
Biotechnology Part 2 Insulin made by E.coli. The last lecture we were talking about how to cut a gene out of the host DNA and transfer it into a bacterial.
Researchers use genetic engineering to manipulate DNA. Section 2: DNA Technology K What I Know W What I Want to Find Out L What I Learned.
GENETIC ENGINEERING CHAPTER 20
Triplex forming oligonucleotides (TFO)
Molecular Biology II Lecture 1 OrR. Restriction Endonuclease (sticky end)
Summary for the Conference. Synthesize genomes of several species completely. Synthetic biology in industrial development. Bio-systems and quantitive.
Yeast as a Model System II
The two-hybrid system – why?
CLONING DNA PART II. REVIEW: CHALLENGE REMEMBER THIS?
RECOMBINANT DNA DNA THAT CONTAINS DNA SEGMENTS OR GENES FROM DIFFERENT SOURCES. DNA TRANSFERRED FROM ONE PART OF A DNA MOLECULE TO ANOTHER, FROM ONE CHROMOSOME.
The Importance of Mitochondrial Morphology in Saccharomyces cerevisiae NSF EPSCoR Mentor: Dr. Peter Thorsness Molecular Biology Dept University of Wyoming.
Small interfering ribonucleic acids (siRNA’s) are double stranded RNA molecules used to post transcriptionally silence genes by binding to specific mRNA.
DNA Isolation. Nucleic Acid Structure & Function DNA & RNA are composed of Nucleotides A nucleotide consists of three covalently-linked parts: –A nitrogen.
Lecture 3 – Selection of Recombinants & clone analysis The white colonies will all be recombinants, but only one of these many colonies will contain the.
15.2 Recombinant DNA. Copying DNA – How do scientists copy the DNA of living organisms? –The first step in using the polymerase chain reaction method.
Ito et al. Genome-Scale In Vivo Protein Interaction Testing
E.Coli AS MODERN VECTOR.
Jeopardy Final Jeopardy Gene Cloning Plasmids Ligase PCR $100 $100
Bacterial Transformation
Supplemental Figure 2. (A) AtplaIVA-1 and AtplaIVA-2 null transcription lines for AtPLAIVA mRNA. RNAs from the relevant wild type Col were isolated.
Screening for Methicillin-Resistant Staphylococcus spp
Get out a scratch piece of paper.
Daniel Chi-Hong Lin, Alan D Grossman  Cell 
(new bacteria are clones of original bacteria) Recombinant DNA (new bacteria are clones of original bacteria)
Protein Complex Discovery
Nonfilamentous C. albicans Mutants Are Avirulent
Genetically Modified Organisms
White-Opaque Switching in Candida albicans Is Controlled by Mating-Type Locus Homeodomain Proteins and Allows Efficient Mating  Mathew G. Miller, Alexander.
Protein Complex Discovery
SHU2 mutants have phenotypes similar to the Rad51 paralogs.
E.Coli AS MODERN VECTOR.
Kelly Holmin, advisor Dr
Transcriptional Termination Factors for RNA Polymerase II in Yeast
The putative Jab1-binding domain in S100A7 is required for the interaction with Jab1. The putative Jab1-binding domain in S100A7 is required for the interaction.
Volume 18, Issue 4, Pages (May 2005)
Volume 86, Issue 5, Pages (September 1996)
Presentation transcript:

Detecting Proteins that Interact with the Mbp1 Protein Using Yeast Two-Hybrid Analysis Josh McHugh Faculty Mentor: Dr. Dan Herman University of Wisconsin – Eau Claire 1) Background 4) Discussion 2) Methods 5) Acknowledgements 3) Methods Continued In an effort to better understand morphogenesis in Candida albicans – the process by which it transforms from the yeast form to the filamentous form – we are in the process of performing a yeast two-hybrid analysis to look at the interactions of the protein Mbp1 with itself, Swi6, and Skn7. It has been shown in previous research that Mbp1 plays an integral role in this process under nitrogen limiting conditions. By performing the aforementioned analysis, we hope add to the understanding of how morphogenesis takes place. 1)Genomic DNA is isolated from C. albicans 2)Two types of plasmid DNA are isolated: pGAD, which contains a coding region for leucine, and pGBK, which contains a coding region for tryptophan Yeast two-hybrid analysis is a procedure that detects physical interactions between proteins, and it relies on the fact that transcription factors have distinct binding and activating domains. These domains do not need to be connected for the transcription factor to function; they simply need to be close together. In order to perform this test, the binding domain is attached to Mbp1 and the activating domain is attached separately to Mbp1, Swi6, and Skn7. If Mbp1 interacts with any of these proteins, the two domains will be brought together, and transcription of the reporter gene histidine will ensue. This will allow the yeast to survive on an agar plate lacking histidine. We would like to thank the following for their support of our research: The Office of Research and Sponsored Programs Images from: )The yeast Saccharomyces cerevisiae is then transformed to take in the plasmid and the gene fragment, at which point it will insert the gene into the plasmid. S. cerevisiae mating type a will be transformed with pGAD and Mbp1, while mating type α will be transformed with pGBK and one of Mbp1, Swi6, or Skn7. 3)Genes for Mbp1, Swi6, and Skn7 are replicated from the genomic DNA via PCR 5)The S. cerevisiae with pGADMbp1 are selected for by being grown on plates without leucine, and those with any of the pGBK plasmids are grown on plates without tryptophan for selection 6)PCR is then performed to verify that the yeast strains contain the plasmid 7)The pGADMbp1 strain is then separately crossed with each of the pGBK strains in order to produce the diploid form of S. cerevisiae, which would be able to survive on a plate lacking both leucine and tryptophan. 8)Each successful cross is then transferred to a plate without leucine, tryptophan, and histidine to test for protein interaction. Fig. 1: Yeast and filamentous morphologies of C. albicans. Fig. 2: pGAD and pGBK plasmid vectors. Fig 3: Gel Electrophoresis results of genes replicated from genomic DNA. Lanes from left to right: ladder, Mbp1, Mbp1, Swi6, Skn7, ladder. pGADMbp1 pGBKMbp1 pGBKSwi6 pGBKSkn7 S. cerevisiae type α S. cerevisiae type a Fig. 4: Transformation of S. cerevisiae types a and α. Streak 1: S. cerevisiae type a Streak 2: S. cerevisiae type α Location of diploid S. cerevisiae. Fig. 5: S. cerevisiae mating cross technique. Fig 6: Diagram of yeast two-hybrid procedure.