 Antifree proteins (AFPs) have been isolated from several organisms. › Fish, insects, plants, bacteria  Bind to ice crystals, inhibit growth, lower.

Slides:



Advertisements
Similar presentations
Recombinant DNA Technology
Advertisements

Lecture 18, Chapter 11 Analysis of transgenic plants part I
Aulani "GE" Presentation 3 Gene Cloning Aulanni’am Biochemistry Laboratory Chemistry Department Brawijaya University
Expression of Cholera toxin B subunit in Banana callus culture Dawn Rivard.
BCM208 Metabolic Biochemistry Topic 7: Gene metabolism and Expression.
What are the Methods and Approaches Used to Identify and Study Arabidopsis Seed Knock- Out Mutations? Eric Newton Garen Polatoglu Rena Schweizer.
What Are the Methods and Approaches Used Study Knock-Out Mutations? Elaine Chiu Nancy Phang June 4, 2009.
Gene Regulation: What it is, and how to detect it By Jordan, Jennifer, and Brian.
Genetics in the real world: Developing a new genetic system in bacteria Abigail Salyers
1 Review Describe the process scientists use to copy DNA Use Analogies How is genetic engineering like computer programming 2 Review What is a transgenic.
Katie Surckla.  hGM-CSF stands for human Granulocyte- Macrophage Colony Stimulating Factor  hGM-CSF is a cytokine which regulates the production and.
Lecture 18, Chapter 11 Analysis of transgenic plants part I Mat Halter 3/27/12 Plant Genetics, Breeding and Biotechnology (PLSC 452/552), University of.
Lecture 19, Chapter 11 Analysis of transgenic plants part II Neal Stewart.
Analysis of Transgenic Plants. 1.Regeneration on Selective Medium Selectable Marker Gene.
Construction, Transformation, and Prokaryote Expression of a Fused GFP and Mutant Human IL-13 Gene Sequence Lindsay Venditti, Department of Biological.
20.1 – 1 Look at the illustration of “Cloning a Human Gene in a Bacterial Plasmid” (Figure 20.4 in the orange book). If the medium used for plating cells.
Manufacture of Human Interleukin 13 Protein Using a Prokaryotic Expression System Ryan Rupp, York College of Pennsylvania, Department of Biological Sciences.
-The methods section of the course covers chapters 21 and 22, not chapters 20 and 21 -Paper discussion on Tuesday - assignment due at the start of class.
11/1/2009 Biology 11.1 Gene Technology Gene Technology.
20.1 – 1 Look at the illustration of “Cloning a Human Gene in a Bacterial Plasmid” (Figure 20.4 in the orange book). If the medium used for plating cells.
1 Genetics Faculty of Agriculture Instructor: Dr. Jihad Abdallah Topic 13:Recombinant DNA Technology.
Ch. 13 Genetic Engineering
DNA Technology Chapter 20.
How do you identify and clone a gene of interest? Shotgun approach? Is there a better way?
Bacterial Transformation
Chapter 20 Experimental Systems Dr. Capers.  In vivo ○ Involve whole animal  In vitro ○ Defined populations of immune cells are studied under controlled.
Library screening Heterologous and homologous gene probes Differential screening Expression library screening.
NIS - BIOLOGY Lecture 57 – Lecture 58 DNA Technology Ozgur Unal 1.
Lecture 7 Manipulation of foreign gene and secretion of foreign protein.
Determining if the fused product of Botox A and GFP can be used to observe the binding patterns of Botulinum toxin A. Felicia Yothers Department of Biological.
Lim et al, Supplemental Figure S1. OsRING-H2 type : 5 OsRING-HC type : 1 OsRING-v type : 1 OsRING-H2 type : 9 OsRING-HC type : 8 OsRING-v type : 2 OsRING-H2.
Genetic Engineering BSC 1010L Transformation of E. coli with Jellyfish GFP.
LOGO A novel WRKY transcriptional factor from Thlaspi caerulescens negatively regulates the osmotic stress tolerance of transgenic tobacco Plant Cell Rep.
Relationship between Genotype and Phenotype
Lecturer: David. * Reverse transcription PCR * Used to detect RNA levels * RNA is converted to cDNA by reverse transcriptase * Then it is amplified.
Molecular Genetic Technologies Gel Electrophoresis PCR Restriction & ligation Enzymes Recombinant plasmids and transformation DNA microarrays DNA profiling.
NOTES - CH 15 (and 14.3): DNA Technology (“Biotech”)
Molecular Basis for Relationship between Genotype and Phenotype DNA RNA protein genotype function organism phenotype DNA sequence amino acid sequence transcription.
The C3HC4-Type RING Zinc Finger and MYB Transcription Factor Families Matthew Taube June 5, 2008 HC70AL.
MOLECULAR BIOLOGY IN ACTION In this project, students will use what they have learned in the previous courses to complete a larger multi-step molecular.
Da-Hyeong Cho Protein Engineering Laboratory Department of Biotechnology and Bioengineering Sungkyunkwan University Site-Directed Mutagenesis.
Gene Cloning & Creating DNA Libraries. Клонирование генов Что означает термин «клонирование»? Как происходит клонирование генов? Чем это отличается от.
Bacterial Transformation Green Fluorescent Protein.
Supplemental Figure 1. The cell death phenotype of fhy3 far1 double mutants. A. The cell death phenotype of fhy3-4 far1-2 mutant plants under LD conditions.
Volume 5, Issue 2, Pages (March 2012)
Hannah Jernigan University of Wyoming
(A) (B) Supplementary Fig. 1 Sequence alignment and Phylogenetic analysis of DJ-1 homologs. (A). Multiple sequence alignment of DJ1 homologs from A.
DNA Technology and Genomics
Supplemental Figure 1 A) B) C)
GM Foods Determination
PLANT BIOTECHNOLOGY & GENETIC ENGINEERING (3 CREDIT HOURS)
Technical Aspects of Recombinant DNA and Gene Cloning
RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance  Louise Jones,
Volume 5, Issue 2, Pages (March 2012)
Volume 4, Issue 1, Pages (January 2011)
Volume 2, Issue 1, Pages (January 2009)
Antigenic Variation in Lyme Disease Borreliae by Promiscuous Recombination of VMP- like Sequence Cassettes  Jing-Ren Zhang, John M Hardham, Alan G Barbour,
Volume 3, Issue 2, Pages (August 2002)
Andrew Wilber, Michael Lu, Michael C. Schneider  Molecular Therapy 
Objective: Convert a hulled (covered) barley into a hull-less (Naked
Volume 8, Issue 5, Pages (May 2015)
Volume 4, Issue 3, Pages (May 2011)
A DTX/MATE-Type Transporter Facilitates Abscisic Acid Efflux and Modulates ABA Sensitivity and Drought Tolerance in Arabidopsis  Haiwen Zhang, Huifen.
Abridged Genetic Engineering Pathway (Original “A” Sequence)
BRI1/BAK1, a Receptor Kinase Pair Mediating Brassinosteroid Signaling
Volume 5, Issue 6, Pages (November 2012)
Volume 1, Issue 3, Pages (May 2008)
Volume 2, Issue 1, Pages (January 2009)
Volume 11, Issue 7, Pages (July 2018)
Ichiro Mitsuhara, Kamal A. Malik, Masayuki Miura, Yuko Ohashi 
Presentation transcript:

 Antifree proteins (AFPs) have been isolated from several organisms. › Fish, insects, plants, bacteria  Bind to ice crystals, inhibit growth, lower freezing point and not melting point.

 Thermal hysteresis activity (THA)- difference between melting point and nonequilibrium freezing point.  Used as an indicator of AFPs activity, so AFPs often referred to as thermal hysteresis proteins (THPs).  Varies among species: Insects (3-6 ºC), Fish ( ºC), Plants ( ºC)

 AFP-producing insects: goal is to avoid freezing, cannot survive if body fluids actually freeze.  AFPs lower freezing point of hemolymph and gut fluid to prevent freezing from the external ice across the body surface.

 Can achieve higher crop yields by improving freezing tolerance of plants.  Therefore, want to express AFPs in frost- susceptible crops to increase their cold tolerance.

 Some of the most effective ATPs found in insects.  Want to test the MpAFP149 gene, isolated from the beetle Microdera puntipennis dzungarica,in its ability to increase cold-tolerance of transgenic tobacco plants and protect them from freezing damage.

 363 bp with a signal peptide sequence  Transcript encoding 98 amino acids of mature peptide is 68.37% homologous with published AFP from Tenebrio molitor (Tm)  Tm expressed successfully in E. coli; high activity at protecting bacteria at low temperature, linearly correlated with AFP concentration.

 Confirm expression of MpAFP149 in plants and visualize sub-cellular localization  MpAFP149 gene with 35S promoter fused with green fluorescent protein (GFP) in plasmid pCAMBIA1302-GFP  Introduced into onion epidermal cells via particle bombardment

 MpAFP149 gene with signal peptide sequence obtained by PCR.  Gene construct CaMV35S-MpAFP149-Nos inserted into plasmid pCAMBIA1302 with HindIII and EcoRI to form expression vector pCAMBIA1302-MpAFP149

 Expression vector pCAMBIA1302- MpAFP149 transferred into competent Agrobacterium cells (EHA105 strain)  DNA extracted from kanamycin-resistant surviving Agrobacterium colonies  PCR to confirm presence of MpAFP149 transgene

 1-2 in. young tobacco leaf discs infected with EHA105 Agrobacterium containing pCAMBIA1301-MpAFP149.  Cultivated in the dark at 28 ºC for 2 days.  Leaf discs transferred to generation medium supplemented with hygromycin.  T0 plants allowed to grow and flower and set seeds in a growth chamber.

 Allowed to grow 15 weeks in green house before harvesting seed capsules  T0 and Wild-type seeds sterilized by soaking in 1:9 (v/v) 30% bleach:ethanol  Rinsed 5 times with ethanol and left overnight to volatize ethanol

 T0 seeds germinated on plates with hygromycin to select for seedlings carrying HPTII gene  Transplanted into pots to full growth at 25 ºC

 Extracted genomic DNA and performed PCR to identify MpAFP149 gene  RNA isolated from plant leaves and reverse transcription carried out  RT-PCR products run through agarose gel electrophoresis to check MpAFP140 transcription

 Wild-type leaves and transgenic tobacco leaves  Polyclonal antibody raised in mouse against MpAFP149 protein  Immunogold labeling (Antibodies conjugated to gold particles)

 Extracted apoplastic proteins from leaves and separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE)  Western blot with antibody against MpAFP149 protein

 After growing for one month, three transgenic and three wild-type plants of similar growth states and no visible phenotypical differences were chosen to undergo cold treatment, measure electrolyte leakage, and Malondialdehyde (MDA) content.

 Set temperature in freezing chamber to -1 ºC for 0, 24, 48, and 72 hours and observed phentypes.  In addition, leaf samples from each group were washed with deionized water and then immersed in deionized water.  After vacuum infiltration, the electric conductivity of supernatant was detected.

 MDA- natural occuring reactive species that is a marker for oxidative stress  The level of MDA at -1 ºC was determined to analyze the comparative rate of lipid peroxidation.

 The localization of MpAFP149 was determined by expressing MpAFP149:GFP construct plasmid in onion epidermal cells.  For the control, fluorescence was seen throughout the entire cell and for the transformed cells it was solely in the apoplast (see Figure next slide).

 35S-MpAFP149-NOS vector transformed into tobacco using Agrobacterium- mediated gene transfer.  Screened by hygromycin and tested for the presence of the vector by PCR.  Two samples, T0-5 and T0-39 showed higher transcript level by RT-PCR.  These two lines were chosen for detailed analysis.

 Immunogold labeling approach used to determine if MpAFP149 protein was expressed and where it localized in transgenic tobacco.  Showed that MpAFP149 protein accumulated in outer layers of cell wall in transgenic plant, but absent in control tobacco plant

 Western blot for apoplastic proteins showed expected protein band of 10.2 kDa, indicating that mature peptide protein MpAFP149 synthesized in transgenic tobacco.

 When exposed for 1 day, both transgenic and wild-type tobacco plants only exhibited moderate dehydration.  When exposed for 2 and 3 days, most leaves of wild-type were frozen but transgenic tobacco only exhibited dehydration of a few older leaves near the plant base.

 After returning to room temperature, MpAFP149 plants overcame dehydration and recovered completely.  Wild-type displayed permanent damage.  Transgenic line displayed improved cold tolerance and enhanced recovery

 Low temperatures disrupted semi- permeability of tobacco cytomembranes  Effusion of electrolytes resulted in increased electrical activity of tissues  Over time, ion leakage difference increased between control and transgenic tobacco.

 Increase of MDA parallels the increase in conductivity/ion leakage, one does not cause the other.  Wild-type plants suffered higher oxidative lipid injury than transgenic plants; correlated to increases in ion leakage and MDA content.

 Transgenic tobacco plants expressing MpAFP149 protein with the signal peptide showed improved tolerance to cold and an enhanced recovery.  MpAFP149 may be used as a candiate for the improvement of frost-resistant crops.

 Wang, Y., Qiu, L., Dai, C., Wang, J., Luo, J., Zhang, F., & Ma, J. (2008) Expression of insect (Microdera puntipennis dzungarica) antifreeze protein MpAFP149 confers the cold tolerance to transgenic tobacco. Plant Cell Rep 27: