The bacterial aetiology of pleural empyema

Slides:

Advertisements

Similar presentations

Standardization and quality assurance for antimicrobial resistance surveillance of Streptococcus pneumoniae and Staphylococcus aureus within the European.

Advertisements

Procalcitonin to guide taking blood cultures in the intensive care unit; a cluster- randomized controlled trial P.J. van der Geest, M. Mohseni, D. Nieboer,

Cryptococcosis—the impact of delay to diagnosis

Familial Q fever clustering with variable manifestations imitating infectious and autoimmune disease A. Abu Rmeileh, T. Khoury, K. Meir, A. Drori, M.

The impact of 13-valent pneumococcal conjugate vaccination on virus-associated community-acquired pneumonia in elderly S.M. Huijts, F.E.J. Coenjaerts,

Oral azithromycin given during labour decreases bacterial carriage in the mothers and their offspring: a double-blind randomized trial A. Roca, C. Oluwalana,

C.N. van Ettekoven, D. van de Beek, M.C. Brouwer

Incidence and outcome of Staphylococcus aureus endocarditis—a 10-year single-centre northern European experience H. Asgeirsson, A. Thalme, M. Kristjansson,

Control of multidrug-resistant Gram-negative bacteria in low- and middle-income countries—high impact interventions without much resources N. Singh,

Migrant health—a cause for concern?

Pneumococcal infection in adults: burden of disease

Use of a multiplex PCR-based reverse line blot (mPCR/RLB) hybridisation assay for the rapid identification of bacterial pathogens Y. Wang, F. Kong, G.L.

Maternal colonization with Staphylococcus aureus and Group B streptococcus is associated with colonization in newborns A. Roca, A. Bojang, B. Camara,

Screening of migrants for tuberculosis identifies patients with multidrug-resistant tuberculosis but is not sufficient P. Helbling Clinical Microbiology.

Clinical impact of antibiotic-resistant Gram-positive pathogens

A. F. Simonetti, C. Garcia-Vidal, D. Viasus, D. García-Somoza, J

Development of two real-time multiplex PCR assays for the detection and quantification of eight key bacterial pathogens in lower respiratory tract infections

The importance of enterovirus surveillance in a Post-polio world

First isolation of Akkermansia muciniphila in a blood-culture sample

Tracking human migration patterns through the oral bacterial flora

Comparison of community-onset Staphylococcus argenteus and Staphylococcus aureus sepsis in Thailand: a prospective multicentre observational study N.

Pharmacodynamics of doxycycline

Inga Odenholt, Elisabeth Löwdin, Otto Cars

Do we need new antibiotics?

Maternal colonization with Staphylococcus aureus and Group B streptococcus is associated with colonization in newborns A. Roca, A. Bojang, B. Camara,

Standardization and quality assurance for antimicrobial resistance surveillance of Streptococcus pneumoniae and Staphylococcus aureus within the European.

Enhanced surveillance of carbapenemase-producing Gram-negative bacteria to support national and international prevention and control efforts R. Freeman

Comparing a single-day swabbing regimen with an established 3-day protocol for MRSA decolonization control H. Frickmann, N.G. Schwarz, A. Hahn, A. Ludyga,

Clinical Microbiology and Infection

F. Reid, P. Oakeshott, S.R. Kerry, P.E. Hay, J.S. Jensen

Pharmacodynamic properties of HMR 3004, a novel ketolide, on respiratory pathogens, enterococci and Bacteroides fragilis demonstrated by studies of time.

D. Esel, B. Sümerkan, S. Kocagöz Clinical Microbiology and Infection

Cytomegalovirus reactivation enhances the virulence of Staphylococcus aureus pneumonia in a mouse model S. Hraiech, J. Bordes, J.L. Mège, X. de Lamballerie,

Bacterial resistance—the clinical challenge

M. Roche, H. Humphreys, E. Smyth, J. Phillips, R. Cunney, E

Markers of acute inflammation in assessing and managing lower respiratory tract infections: focus on procalcitonin B. Müller, C. Prat Clinical Microbiology.

Human infection with H9N2 avian influenza in northern China

Evaluation of vancomycin MIC creep in methicillin-resistant Staphylococcus aureus infections—a systematic review and meta-analysis R. Diaz, V. Afreixo,

Emergence of dalbavancin non-susceptible, vancomycin-intermediate Staphylococcus aureus (VISA) after treatment of MRSA central line-associated bloodstream.

R. Bitterman, M. Paul, D. Polak, Y. Geffen

C. Kampmann, J. Dicksved, L. Engstrand, H. Rautelin

Metagenomics and probiotics

M. Aires-de-Sousa Clinical Microbiology and Infection

K.J. Psoter, A.J. De Roos, J. Wakefield, J. Mayer, M. Rosenfeld

M. C. Alanin, K. G. Nielsen, C. von Buchwald, M. Skov, K. Aanaes, N

Previously unknown species of Aspergillus

Familial Q fever clustering with variable manifestations imitating infectious and autoimmune disease A. Abu Rmeileh, T. Khoury, K. Meir, A. Drori, M.

Symposia and Oral Presentations

T.M. File Clinical Microbiology and Infection

Sexually acquired Zika virus: a systematic review

Community-acquired pneumonia: epidemiologic and clinical consideration

Impact of an evidence-based guideline on the management of community-acquired bacterial meningitis: a prospective cohort study J.M. Costerus, M.C. Brouwer,

Gender differences in the outcome of community-acquired Staphylococcus aureus bacteraemia: a historical population-based cohort study J. Smit, L.E. López-Cortés,

Clinical Microbiology and Infection

Clinical Microbiology and Infection

The atypical pneumonias: clinical diagnosis and importance

J.J. Keller, M.-C. Tsai, C.-C. Lin, Y.-C. Lin, H.-C. Lin

W. Witte Clinical Microbiology and Infection

Antibiotic overconsumption and resistance in Turkey

B.A. Cunha Clinical Microbiology and Infection

J.L. Balcázar Clinical Microbiology and Infection

G.C. Schito Clinical Microbiology and Infection

Prospective study of pathogens in asymptomatic travellers and those with diarrhoea: aetiological agents revisited T. Lääveri, J. Antikainen, S.H. Pakkanen,

CMI editorial report, 2016 Clinical Microbiology and Infection

Impact of a targeted isolation strategy at intensive-care-unit-admission on intensive- care-unit-acquired infection related to multidrug-resistant bacteria:

Cefazolin versus anti-staphylococcal penicillins for the treatment of patients with Staphylococcus aureus bacteraemia S. Weis, M. Kesselmeier, J.S. Davis,

The burden of chikungunya in the Pacific

Genetic diversity of community-associated methicillin-resistant Staphylococcus aureus in southern Stockholm, H. Fang, G. Hedin, G. Li, C.E.

CMI readers' survey Clinical Microbiology and Infection

Rajko Saletinger, Mario Poljak, Franc Strle

Presentation transcript:

The bacterial aetiology of pleural empyema The bacterial aetiology of pleural empyema. A descriptive and comparative metagenomic study R. Dyrhovden, R.M. Nygaard, R. Patel, E. Ulvestad, Ø. Kommedal Clinical Microbiology and Infection DOI: 10.1016/j.cmi.2018.11.030 Copyright © 2018 The Author(s) Terms and Conditions

Clinical Microbiology and Infection DOI: (10.1016/j.cmi.2018.11.030) Copyright © 2018 The Author(s) Terms and Conditions

Fig. 1 UniFrac-analysis of empyemas. Phylogenetic tree of unweighted (a) and weighted (b) UniFrac-analysis of all included pleural empyemas. Each number represents one sample. CAP, fulfilment of diagnostic criteria for community-acquired pneumonia (CAP) and identification of bacteria known to cause CAP: Streptococcus pneumoniae, Staphylococcus aureus, Pseudomonas aeruginosa and Streptococcus pyogenes. Clinical Microbiology and Infection DOI: (10.1016/j.cmi.2018.11.030) Copyright © 2018 The Author(s) Terms and Conditions

Fig. 2 Venn diagram analysis comparing species found in 27 empyemas of poorly described aetiology and 25 brain abscesses with assumed oral/sinus origin. The numbers in parenthesis are the total number of species found in each group. In the middle column, the first number in parenthesis represents empyemas and the second brain abscesses. Clinical Microbiology and Infection DOI: (10.1016/j.cmi.2018.11.030) Copyright © 2018 The Author(s) Terms and Conditions

Fig. 3 Comparative UniFrac-analysis of empyemas and brain abscesses. Principal Coordinates Analysis of unweighted (a) and weighted (b) UniFrac-analysis of the 27 empyemas of poorly described aetiology and 25 oral/sinus-derived brain abscesses. The figure shows no clear clustering into separate groups. Each dot represents one sample. Clinical Microbiology and Infection DOI: (10.1016/j.cmi.2018.11.030) Copyright © 2018 The Author(s) Terms and Conditions