ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters

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ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters Christoph D. Schmid, Philipp Bucher  Cell  Volume 131, Issue 5, Pages 831-832 (November 2007) DOI: 10.1016/j.cell.2007.11.017 Copyright © 2007 Elsevier Inc. Terms and Conditions

Figure 1 Orientation Split of ChIP-Seq Tags Unambiguously Identifies Center Positions of DNA-Protein Complexes The average occurrence of 5′ and 3′ tag starts is plotted over positions relative to the transcription start site (TSS) for three ChIP-Seq experiments. The frequencies are given as tag counts per base pair. The counts are averaged over 4290 promoters and 15 adjacent positions. The black line represents cumulative counts from both strands as presented in Figure 2 of Barski et al. (2007). The separation of + and − DNA strand tags deconvolutes overlapping signals from the 5′ and 3′ ends of immunoprecipitated fragments and allows estimation of the average fragment size. Cell 2007 131, 831-832DOI: (10.1016/j.cell.2007.11.017) Copyright © 2007 Elsevier Inc. Terms and Conditions