SPM Software & Resources

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SPM Software & Resources Wellcome Trust Centre for Neuroimaging University College London SPM Course London, October 2010

Statistical Inference Image time-series Spatial filter Design matrix Statistical Parametric Map Realignment Smoothing General Linear Model Statistical Inference RFT Normalisation p <0.05 Anatomical reference Parameter estimates

Software: SPM8 Open Source academic freeware (under GPL) Requirements: MATLAB: 7.1 (R14SP3) to 7.11 (R2010b) no Mathworks toolboxes required Supported platforms (MEX files): File Formats: Images: NIfTI-1 (& Analyze, DICOM) Surface meshes: GIfTI M/EEG: most manufacturers (with FieldTrip’s fileio) A standalone version (“compiled”) is available for beta testing. Linux (32 and 64 bit) Windows (32 and 64 bit) Mac Intel (32 and 64 bit)

SPM Website Introduction to SPM SPM distribution: SPM2, SPM5, SPM8 Documentation & Bibliography SPM email discussion list SPM short course Example data sets SPM extensions http://www.fil.ion.ucl.ac.uk/spm/

SPM Toolboxes User-contributed SPM extensions: http://www.fil.ion.ucl.ac.uk/spm/ext/

Online help & function descriptions SPM Documentation SPM Books: Human Brain Function I & II Statistical Parametric Mapping Peer reviewed literature Online help & function descriptions SPM Manual

SPM Online Bibliography

SPM datasets PET, fMRI (1st and 2nd level), PPI, DCM, EEG, MEG, LFP.

SPM Online Bibliography

External Resources SPM @ Wikipedia SPM @ Scholarpedia http://en.wikipedia.org/wiki/Statistical_parametric_mapping SPM @ Scholarpedia http://www.scholarpedia.org/article/SPM SPM @ WikiBooks http://en.wikibooks.org/wiki/SPM MRC-CBU Imaging/MEG wiki http://imaging.mrc-cbu.cam.ac.uk/imaging/CbuImaging http://imaging.mrc-cbu.cam.ac.uk/meg SPM @ NITRC http://www.nitrc.org/projects/spm/

SPM Mailing List http://www.fil.ion.ucl.ac.uk/spm/support/ spm@jiscmail.ac.uk

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