1. Chapter 3: The Cellular Level of Organization

2. KEY CONCEPT Cells: basic structural and functional units of life –respond to their environment –maintain homeostasis at the cellular level –modify structure and function over time

3. Figure 3–1 The Cell Performs all life functions

4. Sex Cells Sex cells (germ cells): –reproductive cells –male sperm –female oocytes (eggs)

5. Somatic Cells Somatic cells (soma = body): –all body cells except sex cells

6. Functions of Cell Membrane (1 of 2) Physical isolation: –barrier Regulates exchange with environment: –ions and nutrients enter –waste and cellular products released

7. Functions of Cell Membrane (2 of 2) Monitors the environment: –extracellular fluid composition –chemical signals Structural support: –anchors cells and tissues

8. The Cell Membrane Contains lipids, carbohydrates, and functional proteins

9. Phospholipid Bilayer Double layer of phospholipid molecules: –hydrophilic heads—toward watery environment, both sides –hydrophobic fatty-acid tails—inside membrane –barrier to ions and water soluble compounds

10. Membrane Proteins Integral proteins: –within the membrane Peripheral proteins: –inner or outer surface of the membrane

11. 6 Functions of Membrane Proteins (1 of 2) 1.Anchoring proteins (stabilizers): – attach to inside or outside structures 2.Recognition proteins (identifiers): – label cells normal or abnormal 3.Enzymes: –catalyze reactions

12. 6 Functions of Membrane Proteins (2 of 2) 4.Receptor proteins: – bind and respond to ligands (ions, hormones) 5.Carrier proteins: – transport specific solutes through membrane 6.Channels: –regulate water flow and solutes through membrane

13. Functions of Membrane Carbohydrates Lubrication and protection Anchoring and locomotion Specificity in binding (receptors) Recognition (immune response)

14. Cytoplasm All materials inside the cell and outside the nucleus: –cytosol (fluid): dissolved materials: –nutrients, ions, proteins, and waste products –organelles: structures with specific functions

15. Types of Organelles Nonmembranous organelles: –no membrane –direct contact with cytosol Membranous organelles: –covered with plasma membrane –isolated from cytosol

16. Nonmembranous Organelles 6 types of nonmembranous organelles: –cytoskeleton –microvilli –centrioles –cilia –ribosomes –proteasomes

17. Figure 3–3a The Cytoskeleton Structural proteins for shape and strength

18. Microfilaments Thin filaments composed of the protein actin: –provide additional mechanical strength –interact with proteins for consistency –Pairs with thick filaments of myosin for muscle movement

19. Microtubules Large, hollow tubes of tubulin protein: –attach to centrosome –strengthen cell and anchor organelles –change cell shape –move vesicles within cell (kinesin and dynein) –form spindle apparatus

20. Figure 3–3b Microvilli Increase surface area for absorption Attach to cytoskeleton

21. Centrioles in the Centrosome Centrioles form spindle apparatus during cell division Centrosome: cytoplasm surrounding centriole Figure 3–4a

22. Cilia Power Cilia move fluids across the cell surface Figure 3–4b,c

23. Ribosomes Build polypeptides in protein synthesis Two types: –free ribosomes in cytoplasm: proteins for cell –fixed ribosomes attached to ER: proteins for secretion

24. Proteasomes Contain enzymes (proteases) Disassemble damaged proteins for recycling

25. Membranous Organelles 5 types of membranous organelles: –endoplasmic reticulum (ER) –Golgi apparatus –lysosomes –peroxisomes –mitochondria

26. Endoplasmic Reticulum (ER) endo = within, plasm = cytoplasm, reticulum = network Cisternae are storage chambers within membranes

27. Functions of ER Synthesis of proteins, carbohydrates, and lipids Storage of synthesized molecules and materials Transport of materials within the ER Detoxification of drugs or toxins

28. Smooth Endoplasmic Reticulum (SER) No ribosomes attached Synthesizes lipids and carbohydrates: –phospholipids and cholesterol (membranes) –steroid hormones (reproductive system) –glycerides (storage in liver and fat cells) –glycogen (storage in muscles)

29. Rough Endoplasmic Reticulum (RER) Surface covered with ribosomes: –active in protein and glycoprotein synthesis –folds polypeptides protein structures –encloses products in transport vesicles

30. Golgi Apparatus Vesicles enter forming face and exit maturing face

31. Vesicles of the Golgi Apparatus Secretory vesicles: –modify and package products for exocytosis Membrane renewal vesicles: –add or remove membrane components Lysosomes: –carry enzymes to cytosol

32. Transport Vesicles Figure 3–7a Carry materials to and from Golgi apparatus

33. Figure 3–7b Exocytosis Ejects secretory products and wastes

34. Lysosomes Figure 3–8 Powerful enzyme-containing vesicles: –lyso = dissolve, soma = body

35. Lysosome Structures Primary lysosome: –formed by Golgi and inactive enzymes Secondary lysosome: –lysosome fused with damaged organelle –digestive enzymes activated –toxic chemicals isolated

36. Lysosome Functions Clean up inside cells: –break down large molecules –attack bacteria –recycle damaged organelles –ejects wastes by exocytosis

37. Autolysis Self-destruction of damaged cells: –auto = self, lysis = break –lysosome membranes break down –digestive enzymes released –cell decomposes –cellular materials recycle

38. Mitochondrion Structure Have smooth outer membrane and folded inner membrane (cristae) Matrix: –fluid around cristae

39. Mitochondrial Function Mitochondrion takes chemical energy from food (glucose): –produces energy molecule ATP Figure 3–9b

40. KEY CONCEPT Mitochondria provide cells with energy for life: –require oxygen and organic substrates –generate carbon dioxide and ATP

41. Figure 3–10a The Nucleus Is the cell’s control center

42. Structure of the Nucleus Nucleus: –largest organelle Nuclear envelope: –double membrane around the nucleus Perinuclear space: –between 2 layers of nuclear envelope Nuclear pores: –communication passages

43. Within the Nucleus DNA: –all information to build and run organisms Nucleoplasm: –fluid containing ions, enzymes, nucleotides, and some RNA Nuclear matrix: –support filaments

44. Nucleoli in Nucleus Are related to protein production Are made of RNA, enzymes, and histones Synthesize rRNA and ribosomal subunits

45. Organization of DNA Nucleosomes: –DNA coiled around histones Chromatin: –loosely coiled DNA (cells not dividing) Chromosomes: –tightly coiled DNA (cells dividing)

46. DNA and Genes DNA: –instructions for every protein in the body Gene: –DNA instructions for 1 protein

47. Genetic Code The chemical language of DNA instructions: –sequence of bases (A, T, C, G) –triplet code: 3 bases = 1 amino acid

48. KEY CONCEPT The nucleus contains chromosomes Chromosomes contain DNA DNA stores genetic instructions for proteins Proteins determine cell structure and function

49. Protein Synthesis Transcription: –copies instructions from DNA to mRNA (in nucleus) Translation: –ribosome reads code from mRNA (in cytoplasm) –assembles amino acids into polypeptide chain

50. Protein Synthesis Processing: –by RER and Golgi apparatus produces protein

51. mRNA Transcription A gene is transcribed to mRNA in 3 steps: –gene activation –DNA to mRNA –RNA processing

52. Step 1: Gene Activation Uncoils DNA, removes histones Start (promoter) and stop codes on DNA mark location of gene: –coding strand is code for protein –template strand used by RNA polymerase molecule

53. Step 2: DNA to mRNA Enzyme RNA polymerase transcribes DNA: –binds to promoter (start) sequence –reads DNA code for gene –binds nucleotides to form messenger RNA (mRNA) –mRNA duplicates DNA coding strand, uracil replaces thymine

54. Step 3: RNA Processing At stop signal, mRNA detaches from DNA molecule: –code is edited (RNA processing) –unnecessary codes (introns) removed –good codes (exons) spliced together –triplet of 3 nucleotides (codon) represents one amino acid

55. Translation (1 of 6) mRNA moves: –from the nucleus –through a nuclear pore Figure 3–13

56. Translation (2 of 6) mRNA moves: –to a ribosome in cytoplasm –surrounded by amino acids Figure 3–13 (Step 1)

57. Translation (3 of 6) mRNA binds to ribosomal subunits tRNA delivers amino acids to mRNA Figure 3–13 (Step 2)

58. Translation (4 of 6) tRNA anticodon binds to mRNA codon 1 mRNA codon translates to 1 amino acid Figure 3–13 (Step 3)

59. Figure 3–13 (Step 4) Translation (5 of 6) Enzymes join amino acids with peptide bonds Polypeptide chain has specific sequence of amino acids

60. Figure 3–13 (Step 5) Translation (6 of 6) At stop codon, components separate

61. Nucleus Controls Cell Structure and Function Direct control through synthesis of: –structural proteins –secretions (environmental response) Indirect control over metabolism through enzymes

62. KEY CONCEPT Genes: –are functional units of DNA –contain instructions for 1 or more proteins Protein synthesis requires: –several enzymes –ribosomes –3 types of RNA

63. KEY CONCEPT Mutation is a change in the nucleotide sequence of a gene: –can change gene function Causes: –exposure to chemicals –exposure to radiation –mistakes during DNA replication

64. Overcoming the Cell Barrier The cell membrane is a barrier, but: –nutrients must get in –products and wastes must get out

65. Permeability Permeability determines what moves in and out of a cell: A membrane that: –lets nothing in or out is impermeable –lets anything pass is freely permeable –restricts movement is selectively permeable

66. Selective Permeability Cell membrane is selectively permeable: –allows some materials to move freely –restricts other materials

67. Restricted Materials Selective permeability restricts materials based on: –size –electrical charge –molecular shape –lipid solubility

68. Transport Transport through a cell membrane can be: –active (requiring energy and ATP) –passive (no energy required)

69. 3 Categories of Transport Diffusion (passive) Carrier-mediated transport (passive or active) Vesicular transport (active)

70. Solutions All molecules are constantly in motion Molecules in solution move randomly Random motion causes mixing

71. Concentration Gradient Concentration is the amount of solute in a solvent Concentration gradient: –more solute in 1 part of a solvent than another

72. Function of Concentration Gradient Diffusion: –molecules mix randomly –solute spreads through solvent –eliminates concentration gradient

73. Diffusion Solutes move down a concentration gradient

74. Factors Affecting Diffusion Rates Distance the particle has to move Molecule size: –smaller is faster Temperature: –more heat, faster motion

75. Diffusion and the Cell Membrane Figure 3–15 Diffusion can be simple or channel- mediated

76. Simple Diffusion Materials which diffuse through cell membrane: –lipid-soluble compounds (alcohols, fatty acids, and steroids) –dissolved gases (oxygen and carbon dioxide)

77. Channel-Mediated Diffusion Materials which pass through transmembrane proteins (channels): –are water soluble compounds –are ions

78. Osmosis Figure 3–16 Osmosis is the diffusion of water across the cell membrane

79. How Osmosis Works More solute molecules, lower concentration of water molecules Membrane must be freely permeable to water, selectively permeable to solutes

80. Osmosis Water Movement Water molecules diffuse across membrane toward solution with more solutes Volume increases on the side with more solutes

81. Osmotic Pressure Is the force of a concentration gradient of water Equals the force (hydrostatic pressure) needed to block osmosis

82. Isotonic Solutions A solution that does not cause osmotic flow of water in or out of a cell iso = same, tonos = tension

83. Hypotonic Solutions hypo = below Has less solutes Loses water through osmosis

84. Cells and Hypotonic Solutions A cell in a hypotonic solution: –gains water –ruptures (hemolysis of red blood cells) Figure 3–17b

85. Hypertonic Solutions hyper = above Has more solutes Gains water by osmosis

86. Cells and Hypertonic Solutions A cell in a hypertonic solution: –loses water –shrinks (crenation of red blood cells) Figure 3–17c

87. KEY CONCEPT (1 of 2) Concentration gradients tend to even out In the absence of membrane, diffusion eliminates concentration gradients

88. KEY CONCEPT (2 of 2) When different solute concentrations exist on either side of a selectively permeable membrane, osmosis moves water through the membrane to equalize the concentration gradients

89. Facilitated Diffusion Passive Carrier mediated Membrane Transport: Facilitated Diffusion PLAY Figure 3–18

90. How Facilitated Diffusion Works Carrier proteins transport molecules too large to fit through channel proteins (glucose, amino acids): –molecule binds to receptor site on carrier protein –protein changes shape, molecules pass through –receptor site is specific to certain molecules

91. Active Transport Active transport proteins: –move substrates against concentration gradient –require energy, such as ATP –ion pumps move ions (Na +, K +, Ca +, Mg 2 + ) –exchange pump countertransports 2 ions at the same time

92. Figure 3–22a Pinocytosis Pinocytosis (cell drinking) Endosomes “drink” extracellular fluid

93. Phagocytosis Phagocytosis (cell eating) –pseudopodia (psuedo = false, podia = feet) –engulf large objects in phagosomes Figure 3–22b

94. Figure 3–7b Exocytosis Is the reverse of endocytosis

95. Cell Life Cycle Most of a cell’s life is spent in a nondividing state (interphase)

96. Interphase, Mitosis, and Cytokinesis PLAY 3 Stages of Cell Division Body (somatic) cells divide in 3 stages: –DNA replication duplicates genetic material exactly –Mitosis divides genetic material equally –Cytokinesis divides cytoplasm and organelles into 2 daughter cells

97. Interphase The nondividing period: –G-zero phase—specialized cell functions only –G 1 phase—cell growth, organelle duplication, protein synthesis –S phase—DNA replication and histone synthesis –G 2 phase—finishes protein synthesis and centriole replication

98. DNA Replication Figure 3–24 DNA strands unwind DNA polymerase attaches complementary nucleotides

99. Mitosis Mitosis divides duplicated DNA into 2 sets of chromosomes: –DNA coils tightly into chromatids –chromatids connect at a centromere –protein complex around centromere is kinetochore

100. Figure 3–25 (Stage 1) Stage 1: Prophase

101. Features of Prophase Nucleoli disappear Centriole pairs move to cell poles Microtubules (spindle fibers) extend between centriole pairs Nuclear envelope disappears Spindle fibers attach to kinetochore

102. Features of Metaphase Chromosomes align in a central plane (metaphase plate)

103. Features of Anaphase Microtubules pull chromosomes apart Daughter chromosomes groups near centrioles

104. Features of Telophase Nuclear membranes reform Chromosomes uncoil Nucleoli reappear Cell has 2 complete nuclei

105. KEY CONCEPT Mitosis duplicates chromosomes in the nucleus for cell division

106. Figure 3–25 (Stage 4, 2 of 2) Stage 4: Cytokinesis Division of the cytoplasm

107. Features of Cytokinesis Cleavage furrow around metaphase plate Membrane closes, producing daughter cells