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Microbes, e- flow Catabolism – breakdown of any compound for energy

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Presentation on theme: "Microbes, e- flow Catabolism – breakdown of any compound for energy"— Presentation transcript:

1 Microbes, e- flow Catabolism – breakdown of any compound for energy
Anabolism – consumption of that energy for biosynthesis Transfer of e- facilitated by e- carriers, some bound to the membrane, some freely diffusible

2 The Redox ladder H2O H2 O2 NO3- N2 MnO2 Mn2+ Fe(OH)3 Fe2+ SO42- H2S CO2 CH4 Oxic Post - oxic Sulfidic Methanic Aerobes Dinitrofiers Maganese reducers Sulfate reducers Methanogens Iron reducers The redox-couples are shown on each stair-step, where the most energy is gained at the top step and the least at the bottom step. (Gibb’s free energy becomes more positive going down the steps)

3 Profiles and microbial habitats
Minerals Expected? 3 2 Fe2+ depth H2S 4 H2S 1 Org. C Org. C Concentration

4 Diffusion, Fickian Diffusion from high to low levels..
Where D is the diffusion coefficient, dc/dx is the gradient, and J is the flux of material

5 Other nutrients needed for life
Besides chemicals for metabolic energy, microbes need other things for growth. Carbon Oxygen Sulfur Phosphorus Nitrogen Iron Trace metals (including Mo, Cu, Ni, Cd, etc.) What limits growth??

6 Nutrients Lakes are particularly sensitive to the amount of nutrients in it: Oligotrophic – low nutrients, low photosynthetic activity, low organics  clear, clean… Eutrophic – high nutrients, high photosynthetic activity, high organics  mucky, plankton / cyanobacterial population high Plankton growth: 106 CO NO3- + HPO H2O + 18 H+ + trace elements + light  C106H263O110N16P O2 (organic material composing plankton) This C:N:P ratio (106:16:1) is the Redfield Ratio What nutrients are we concerned with in Lake Champlain?

7 Nutrient excess can result
in ‘blooms’

8 Lake Champlain Phosphorus limited? Algal blooms What controls P??

9 Nutrient cycling linked to SRB-IRB-MRB activity
Blue Green Algae blooms FeOOH PO43- Org C + SO42- H2S FeS2 Sulfate Reducers

10 Redox ‘Fronts’ Boundary between oxygen-rich (oxic) and more reduced (anoxic) waters Oxygen input through entrainment (wind, wave action, photosynthesis) Oxygen consumption from heterotrophic consumption, reaction with reduced forms of Fe, Mn, S Anoxic Oxic

11 Methods Voltammetric microelectrodes  In-situ pore water measurements to determine redox front by real time analysis of O2, Fe2+/Fe3+, Mn2+, H2S DGT (Diffusive Gradients in Thin films) to monitor P fluxes through sediment Gravity Coring and chemical extractions of iron, manganese, and phosphorus in the sediment Inductively-coupled plasma optical emission spectroscopy (ICP-OES) to measure iron, manganese, and phosphorus from extractant

12 Voltammetric data - St. Albans Bay Sediments
Mn2+ + 2e- --> Mn0(Hg) H2O2 + 2e- + 2H+  2H2O O2 + 2e- + 2H+  H2O2 Fe3+ + 1e-  Fe2+ FeS(aq)

13 Results: Sediments generally become more reduced as summer progresses
Redox fronts move up and down in response to temperature, wind, biological activity changes This movement of the redox front invokes changes in mineralogy and nutrient dynamics on short time scales

14 Seasonal Phosphorus mobility
Redox front movement mobilizes P in the sediment over time Movement is EVENT based – fluxes should vary significantly in time. We currently have little idea what P fluxes are out of the sediment Profiles show overall enrichment of P, Mn, and Fe in upper sections of SAB sediment Fe and Mn would be primarily in the form of Fe and Mn oxyhydroxide minerals  transformation of these minerals is key to P movement

15 P Loading and sediment deposition
Constantly moving redox fronts affect Fe and Mn minerals, mobilize P and turn ideal profile into what we actually see…

16 Redox changes and Nutrients
We have linked at least some component of P dynamics to redox changes and Fe, Mn mineralogy – this is one of several processes that would affect nutrient balance in these bay systems however. Nitrogen speciation and availability may also be affected by these processes, but potentially in very different ways – hence there may be some background control on N/P ratio which may affect algal community dynamics

17 Geochemical niches and microbial community changes in Saint Albans Bay, Lake Champlain, sediments
PCA analysis of Restriction Fragment Length Polymorphism analysis from DNA extracted from 4 geochemically distinct zones and a 1mm buffer zone between 1 – Oxic, top mm of sediment 2 – Buffer – 1 mm 3 – Nitrate reduction 4 – buffer 2 – 1 mm 5 – manganese reduction 6 – buffer – 1 mm 7 – iron reduction 8 - bottom of sediment column

18 Can reducing conditions force P out of the sediment and into the overlying water column? Incubation experiments: Oxic Anoxic From the volumetric analyses and visually (red is FeOOH  oxidized iron, black is FeS  reduced iron and sulfur) we see the difference in the redox condition between the two cores.

19 DGT films in incubation experiments
Diffusive Gradients in Thin films (DGT) probes put into sediment (½ in sediments, ½ in water above) to measure time-averaged P release in 2 incubation experiments DGT films definitively show potential for significant release of P into pore water and overlying water column on reduction of the Fe minerals present


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