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Computational models for imaging analyses Zurich SPM Course February 6, 2015 Christoph Mathys.

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Presentation on theme: "Computational models for imaging analyses Zurich SPM Course February 6, 2015 Christoph Mathys."— Presentation transcript:

1 Computational models for imaging analyses Zurich SPM Course February 6, 2015 Christoph Mathys

2 What the brain is about What do our imaging methods measure? Brain activity. But when does the brain become active? When predictions (or their precision) have to be adjusted. So where do the brain’s predictions come from? From a model. Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 2

3 What does this mean for neuroimaging? If brain activity reflects model updating, we need to understand what model is updated in what way to make sense of brain activity. Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 3

4 The Bayesian brain and predictive coding Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 4 Hermann von Helmholtz

5 Advantages of model-based imaging Model-based imaging permits us to infer the computational (predictive) mechanisms underlying neuronal activity. to localize such mechanisms. to compare different models. Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 5

6 How to build a model Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 6 Sensory inputHidden states Prediction Inference based on prediction errors Fundamental ingredients:

7 Example of a simple learning model Rescorla-Wagner learning: Page 7 Previous value (prediction) Learning rate New input Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph Mathys

8 From perception to action Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 8 Sensory input True hidden states Inferred hidden states Action WorldAgent Generative process Inversion of perceptual generative model Decision model

9 From perception to action Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 9 Sensory input True hidden states Inferred hidden states Action WorldAgent

10 Example of a simple decision model Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 10

11 All the necessary ingredients Perceptual model (updates based on prediction errors) Value function (inferred state -> action value) Decision model (value -> action probability) Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 11

12 Reinforcement learning example (O’Doherty et al., 2003) Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 12 O’Doherty et al. (2003), Gläscher et al. (2010)

13 Reinforcement learning example Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 13 O’Doherty et al. (2003) Significant effects of prediction error with fixed learning rate

14 Bayesian models for the Bayesian brain Page 14Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph Mathys Sensory input True hidden states Inferred hidden states Action WorldAgent

15 State of the world Model Log-volatility x 3 of tendency Gaussian random walk with constant step size ϑ p(x 3 (k) ) ~ N(x 3 (k-1), ϑ ) Tendency x 2 towards category “1” Gaussian random walk with step size exp(κx 3 +ω) p(x 2 (k) ) ~ N(x 2 (k-1), exp(κx 3 +ω)) Stimulus category x 1 (“0” or “1”) Sigmoid trans- formation of x 2 p(x 1 =1) = s(x 2 ) p(x 1 =0) = 1-s(x 2 ) The hierarchical Gaussian filter (HGF): a computationally tractable model for individual learning under uncertainty Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph MathysPage 15

16 HGF: variational inversion and update equations Page 16 Prediction error Precisions determine learning rate Feb 6, 2015Model-based imaging, Zurich SPM Course, Christoph Mathys

17 Example: Iglesias et al. (2013) Feb 6, 2015Page 17Model-based imaging, Zurich SPM Course, Christoph Mathys Model comparison:

18 HGF: adaptive learning rate Feb 6, 2015Page 18 Simulation: Model-based imaging, Zurich SPM Course, Christoph Mathys

19 Individual model-based regressors Feb 6, 2015Page 19Model-based imaging, Zurich SPM Course, Christoph Mathys

20 Example: Iglesias et al. (2013) Feb 6, 2015Page 20Model-based imaging, Zurich SPM Course, Christoph Mathys

21 Example: Iglesias et al. (2013) Feb 6, 2015Page 21Model-based imaging, Zurich SPM Course, Christoph Mathys

22 Example: Iglesias et al. (2013) Feb 6, 2015Page 22Model-based imaging, Zurich SPM Course, Christoph Mathys

23 Example: Iglesias et al. (2013) Feb 6, 2015Page 23Model-based imaging, Zurich SPM Course, Christoph Mathys

24 How to estimate and compare models: the HGF Toolbox Feb 6, 2015Page 24Model-based imaging, Zurich SPM Course, Christoph Mathys Available at http://www.tranlsationalneuromodeling.org/tapas Start with README and tutorial there Modular, extensible Matlab-based

25 How it’s done in SPM Feb 6, 2015Page 25Model-based imaging, Zurich SPM Course, Christoph Mathys

26 How it’s done in SPM Feb 6, 2015Page 26Model-based imaging, Zurich SPM Course, Christoph Mathys

27 How it’s done in SPM Feb 6, 2015Page 27Model-based imaging, Zurich SPM Course, Christoph Mathys

28 How it’s done in SPM Feb 6, 2015Page 28Model-based imaging, Zurich SPM Course, Christoph Mathys

29 How it’s done in SPM Feb 6, 2015Page 29Model-based imaging, Zurich SPM Course, Christoph Mathys

30 How it’s done in SPM Feb 6, 2015Page 30Model-based imaging, Zurich SPM Course, Christoph Mathys

31 How it’s done in SPM Feb 6, 2015Page 31Model-based imaging, Zurich SPM Course, Christoph Mathys

32 Take home Feb 6, 2015Page 32Model-based imaging, Zurich SPM Course, Christoph Mathys The brain is an organ whose job is prediction. To make its predictions, it needs a model. Model-based imaging infers the model at work in the brain. It enables inference on mechanisms, localization of mechanisms, and model comparison. Sensory input True hidden states Inferred hidden states Action WorldAgent

33 Thank you Feb 6, 2015Page 33Model-based imaging, Zurich SPM Course, Christoph Mathys


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