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IT-DNG meeting, CERN 14.10.2010, Motivation Project Overview Grid services Status Faustin Laurentiu Roman CERN / IFIC

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Presentation on theme: "IT-DNG meeting, CERN 14.10.2010, Motivation Project Overview Grid services Status Faustin Laurentiu Roman CERN / IFIC"— Presentation transcript:

1 IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch Motivation Project Overview Grid services Status Faustin Laurentiu Roman CERN / IFIC faustin.roman@cern.ch faustin.roman@cern.ch Grid services for Hadron Therapy

2 Cancer treatment CANCER = 2 nd largest cause of death & no. 1 for age 45-64 in EU http://www.klinikum.uni-heidelberg.de/fileadmin/pressestelle/pdf/080218HIT_BR_SS_Broschuere_engl.pdf (E. Niederlaender, Causes of death in Europe, Eurostat KS-08-02-001-EN-C, 2006) TREATMENT Surgery Chemotherapy Radiotherapy HADRON THERAPY (PT) => IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

3 Conditions Research Information People Patient referral Model treatment outcome Model treatment outcome Pathology Radiology Genetics Physics Oncology Research Prove efficacy IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

4 CAN GRID HELP? : Coordinated resource sharing and problem solving in dynamic, multi-institutional virtual organizations… (I. Foster et al) Hadrontherapy Information Sharing Platform (HISP) Thanks to AT, ES, UK medical doctors! More info @ EGI Technical Forum: [20] Grid services for hadron therapyGrid services for hadron therapy [21] Hadrontherapy Information Sharing PlatformHadrontherapy Information Sharing Platform [70] Hadrontherapy and Grids - Issues and RequirementsHadrontherapy and Grids - Issues and Requirements IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch Service Oriented Architecture Platform Independence Service security, interoperability, reliability & responsiveness APIs based on open standards “Sandbox” environment for developers User friendly tools and interfaces Easy to use web portals Manuals and accessible proof-of- concepts Long term sustainability Domain requirements

5 Usecase: eReferral and Research DIAGNOSTIC RESEARCH FOLLOW-UP TREATMENT REFERRAL INITIAL TREATMENT DISCOVER INNOVATE TRAINING STEPSDIAGNOSE INITIAL TREAT REFFERAL DECISION REMOTE DECISION TREATFOLOW-UPRESEARCHDISCOVERY DISSEMINATE TRAIN NOVEL TREATMENT ACCESS NOW 1-2 DAYSVAR1-2 WEEKS2 WEEKSWEEKS YEARSMONTHSYEARS FUTURE ACCESS 1-2 DAYSVARINSTANT VARINSTANT MONTHSDAYS<YEAR DATA SIZE 1Gb1.5Gb 5Gb10Gb5Tb IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

6 Usecase1: eReferral Patient data by EMAIL Images by DVD via POST Treatment remains @ H Follow-up difficult to none Patient data by EMAIL Images by DVD via POST Treatment remains @ H Follow-up difficult to none Security Time and reliability Information History Security Time and reliability Information History SSL/ Grid certs? Encrypted storage/SSL Collaborative portal Personal Health Record SSL/ Grid certs? Encrypted storage/SSL Collaborative portal Personal Health Record How is done now? Issues… Any solutions? IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

7 Usecase 2: Research Directive 95/46/EC, Directive 2002/58/EC, EC Recommendation (EC Rec. 2008/594/EC) Country specific: UK DPA 1998, DE BDSG,… Research data Adequate, relevant Informed Consent (Pseudo)Anonymization Publish findings Privacy Confidentiality Autonomy Liability Clinical data Common needs Federated data Security Provenance Workflows Simulations Visualization and Special requests Enhanced Protection Agreement service Semantic integration And ease to use! because.. IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

8 Conceptual Services and functions / Grid tools IFIC Grid Course, Valencia 08.07.2010, faustin.roman@cern.ch Some toolsMore tools … Vine Toolikt: http://vinetoolkit.org/http://vinetoolkit.org/ (Flex, BlazeDS, Liferay) VOMS, AMGA, cgMDR Linux, Apache, MySQL, Eclipse…

9 TOMCAT Liferay CMS Architecture VINE API Tunnel SOAP REST RESOURCES VOMS CE SE AMGA cgMDR other.. Portlets Layout Hospital/Centre HIS RIS PACS Services SSLSSL IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

10 Installed components: – Liferay, VINE, AMGA, cgMDR Next steps VOMS portal integration Web service connection: AMGA and cgMDR More on: https://espace.cern.ch/partnersite/workspace/faust/, e.g. https://espace.cern.ch/partnersite/workspace/faust/ https://espace.cern.ch/partnersite/workspace/faust/Shared%20Documents/Meetings/EGI_speci fic_poster.pdf Soon public: http://twiki.cern.ch/twiki/bin/view/PARTNERitESRhttp://twiki.cern.ch/twiki/bin/view/PARTNERitESR Summary IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

11 Status @ http://vopartner01.cern.ch:8080/ IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch

12 BACKUP: A patient opinion… http://www.nature.com/nm/journal/v16/n7/full/nm0710-744.html IT-DNG meeting, CERN 14.10.2010, faustin.roman@cern.ch


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