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T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA.

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Presentation on theme: "T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA."— Presentation transcript:

1 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Searching and Accessing Full Text Journal Articles Nancy Clark, Director of Medical Informatics Martin Wood, Director, Maguire Medical Library FSU College of Medicine Summer/Fall 2014 1

2 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Objectives for Session Learners will – Do PubMed search using primary functions on web – Locate full articles from PubMed search – Link out to full text articles within resources, mobile and online – Consider other ways to find journal articles (mobile devices, web sites…) – Save searches in NCBI Summer/Fall 20142

3 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Handouts PowerPoint Worksheet for activity Evaluations – Please complete Pre- Workshop Assessment Summer/Fall 20143

4 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Tutorials for PubMed Summer/Fall 20144 Link to PubMed Tutorials

5 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care What is MEDLINE? Database of bio-medical journals (medical, dental, nursing, veterinary, …) Old Index Medicus database Service of National Library of Medicine (NLM) 5,271 biomedical journals, most are peer reviewed Nearly 18+ million citations (around 70,000 new/month) Back to 1860s (primarily back to 1950s) Summer/Fall 20145

6 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 6 What is MEDLINE? Articles are indexed by Real People. Terms are assigned that come from a Controlled Vocabulary (Thesaurus) called MeSH (Medical Subject Headings). MeSH includes sets of subheadings that apply to each term and uses markers to indicate which terms reflect the main focus of the article. Summer/Fall 20146

7 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Where to Search MEDLINE? Pubmed (NLM interface) OVID MD Consult Merck Medicus Medscape Links to – Full text journal articles – Books – EBM databases Summer/Fall 20147

8 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Goal of Journal Search A Few Good Articles Summer/Fall 20148 Full text in as few clicks as possible

9 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Go to PubMed (EZProxy) Under MedResources List Click on Pubmed Summer/Fall 20149

10 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Alternate Option Use Search Engine Box to start Pubmed Search Type in Terms and start Search Summer/Fall 201410

11 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201411

12 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Get a Free NCBI Account. Why? Alerting service – Sends TOC of latest journals – Sends results of searches updates Save searches Save collections of articles Filters which break down your results for you Summer/Fall 201412

13 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care First search of the evening: Author search Use initial(s) most frequently used by author After 2002, full names (when included in the journal itself) may be used May search multiple authors on one search line Summer/Fall 201413

14 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Example of author search: Search for articles by Hurt MM and click the “Search” button Summer/Fall 201414 Hurt MM

15 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Let’s take a look at one article Summer/Fall 201415

16 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201416 Abstract View

17 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MeSH Terms Summer/Fall 201417

18 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MEDLINE View Summer/Fall 201418

19 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201419 Direct Link to Full Text:

20 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Do your own author search exercise Lawrence Weed (LL Weed) Nir Menachemi Robert Brooks (RG Brooks) Summer/Fall 201420

21 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care PubMed tutorial 1 minute tutorial on a simple subject search Summer/Fall 201421

22 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Subject Search Summer/Fall 201422

23 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201423

24 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care PubMed MEDLINE Filter (Limit) Results Left Side Filter by Article Type Text Availability Publication date Species Type research Language … 24 Summer/Fall 2014

25 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Limits Results Summer/Fall 201425

26 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201426 Details – scroll down

27 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201427

28 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Search Strategies Limit search – By type of article – By date – By age group – By language Phrases in quotes: “focal nodular hyperplasia” AND, OR, NOT, parentheses Summer/Fall 201428 “medication errors” AND “quality improvement” NOT (ambulatory OR “nursing home”)

29 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Types of Articles Review Articles Editorials Letters Meta-Analysis – Systematic reviews Clinical Guidelines Original Research – Case Studies – Case Control – Time Series – Cross sectional – Cohort – Control trials – Randomized Control Trials Summer/Fall 201429

30 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Advanced Search Summer/Fall 201430

31 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using Your Search History Summer/Fall 201431

32 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201432 Put a reference in the Clipboard

33 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Clipboard As you search Add articles to Clipboard Collect all the good articles there Summer/Fall 201433

34 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Email Clipboard Summer/Fall 201434

35 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Follow the link to the article Summer/Fall 201435

36 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When you see this… Summer/Fall 201436

37 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201437

38 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When the pretty red button isn’t there…. Summer/Fall 201438

39 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Identify the Full Journal Title, Issue and Article Title Summer/Fall 201439

40 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Finding Full Text Articles Pubmed Linked to full text? No… 1.Search Google Scholar for the article title. 2.Look for journal in Medical E-Journals list. Journal not listed…Medical E-Journals 3.FSU E-Journals from library webpage. In electronic format? No...FSU E-Journals 4.Interlibrary loans for titles not owned by FSU: MedLibrary@med.fsu.eduMedLibrary@med.fsu.edu Summer/Fall 201440

41 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Google Scholar Searches Pubmed, some of our content, links to full text In Search Engines box Search for article title Click on Title or “Find @FSU” Summer/Fall 201441

42 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201442

43 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Saving Articles Summer/Fall 201443

44 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201444 Find it @ FSU

45 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care STEP 2: Look for Journal in Medical E-Journals List In electronic less than 12~ years Each journal different Digitizing old issues slowly 45 Summer/Fall 2014

46 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care STEP 2: or Search E-Journal Titles 46 If there is no FSU icon, there are other options: 1.Search E-Journal Titles for the journal name Summer/Fall 2014

47 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care All FSU E-Journals Under Resources Expand E-Journals Click on All FSU E-Journals Summer/Fall 201447

48 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care FSU Libraries E-Journals Summer/Fall 201448

49 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Interlibrary Loan Summer/Fall 201449

50 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Other Journal Options Summer/Fall 201450

51 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Pubmed Mobile Interface Summer/Fall 201451

52 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Interesting New Tool: knalij.com 52Summer/Fall 2014

53 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MEDLINE Search in uCentral iPad Summer/Fall 201453

54 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201454

55 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Browzine (Tablets Only) Journal e-reader Select most FSU COM Journals to read Look like journals Alert you to new articles Allows saving articles to read offline 55Summer/Fall 2014

56 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Follow Links to Articles in Dynamed In your default browser, Open the Medical Library Log into EZProxy Open Pubmed Minimize In another tab, open Dynamed. Links will take to Pubmed with buttons. Summer/Fall 201456

57 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall 201457

58 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Exercise Write a clinical question What kinds of articles do you want to answer this question Locate first 10 articles on search Find the full text articles Print one of the full text articles or email the articles to yourself Summer/Fall 201458

59 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Open exercises: topics from group Summer/Fall 201459

60 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Review of great Pubmed features Details Limits/filters Advanced Search – History (combine searches) Related articles View in Abstract View to find full article Use NCBI to save searches Summer/Fall 201460

61 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using NCBI Register and get a Username and Password 61 Summer/Fall 2014

62 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Why get NCBI Account? Save searches Save citations in My Bibliography Automatically update and e-mail search results from your saved searches Filter search results Highlighting search terms 62Summer/Fall 2014

63 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 63Summer/Fall 2014

64 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care My NCBI 64Summer/Fall 2014

65 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 65 65 Customize My NCBI Tutorials: http://www.nlm.nih.gov/bsd/disted/pubmed.html http://www.nlm.nih.gov/bsd/disted/pubmed.html Saving Searches Saving References Customizing the Filters Highlighting Search Terms Summer/Fall 2014

66 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 66 My NCBI – Saving a Search Develop a search. Click on ‘Save Search’. April 29, 2008 Medical Informatics Seminar Session 6 66 Summer/Fall 2014

67 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 67 My NCBI – Saving a Search Give name and Save Complete form for email notification ‘My NCBI’ puts the search in your list. Summer/Fall 2014

68 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care April 29, 2008 Medical Informatics Seminar Session 6 68 My NCBI – Saving References (1) Develop a search. Check the references you want to save. Click on ‘Send To’ and select ‘Clipboard’. 68 Summer/Fall 2014

69 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 69 My NCBI – Saving References (2) Go to the ‘Clipboard’ Click on ‘Send To’ and select Collections. Summer/Fall 2014

70 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 70 My NCBI – Saving References (3) Tell My NCBI what to call the collection Or Append to an existing collection April 29, 2008 Medical Informatics Seminar Session 6 70 Summer/Fall 2014

71 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 71 71 My NCBI – Saving References (4) To see the collection or saved search, click on ‘My NCBI’ > Collections Can download collections into a reference manager such as EndNote or RefWorks. Summer/Fall 2014

72 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 72 My NCBI – Customizing the Filters 1.Click on ‘My NCBI’ 2.‘Manage Filters’ Summer/Fall 2014

73 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 73 My NCBI – Customizing the Filters Select from Popular, or Search in Properties. Create a Custom Query Summer/Fall 2014

74 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 74 My NCBI – Highlighting Search Terms Click on ‘NCBI Site Preferences’. Click on ‘Highlighting’ Pick colors Summer/Fall 2014

75 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Have Journal Contents Sent (1) 1.Main Pubmed Page: Journals in NCBI Databases 2.Enter a general subject term, e.g. “New England Journal”, then ‘Go’. 3.Click on a journal title to get information about that journal. 4.Check Journal and Add to Search builder 75Summer/Fall 2014

76 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 76Summer/Fall 2014

77 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 77 Have Journal Contents Sent (2) 5.Click on ‘Search PubMed’. 6.Click on ‘Save Search’, name it, and set up email as earlier. 7.You will be notified when new articles are published in these journals. Summer/Fall 2014

78 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 78 Links to Other NCBI Databases NCBI has other databases that link to PubMed. (examples: CoreNucleotide, Gene, HomoloGene, Protein, Protein) 78 Summer/Fall 2014

79 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summary Use Pubmed to Search for Articles on your topics, My NCBI to manage Link through Dynamed or uCentral MEDLINE search Use red FSU button to find articles If no button: Google Scholar > eJournals list > FSU Journals > Interlibrary loan Any journal article you need, we will get Summer/Fall 201479

80 T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care The End Practice Call or e-mail us for individual help 850-644-3883 MedLibrary@med.fsu.edu Summer/Fall 201480

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