1. 6/23/20151 Graph Theory and Complex Systems in Statistical Mechanics e-mail: jellis-monaghan@smcvt.edujellis-monaghan@smcvt.edu website: http://academics.smcvt.edu/jellis-monaghanhttp://academics.smcvt.edu/jellis-monaghan Jo Ellis-Monaghan

2. 6/23/20152 Getting by with a little (a lot of!) help from my friends…. Patrick Redmond (SMC 2010) Eva Ellis-Monaghan (Villanova 2010) Laura Beaudin (SMC 2006) Patti Bodkin (SMC 2004) Whitney Sherman (SMC 2004) This work is supported by the Vermont Genetics Network through NIH Grant Number 1 P20 RR16462 from the INBRE program of the National Center for Research Resources. Mary Cox (UVM grad) Robert Schrock (SUNY Stonybrook) Greta Pangborn (SMC) Alan Sokal (NYU) Isaac Newton Institute for Mathematical Sciences Cambridge University, UK

3. 6/23/20153 Applications of the Potts Model ● Liquid-gas transitions ● Foam behaviors ● Magnetism ● Biological Membranes ● Social Behavior ● Separation in binary alloys ● Spin glasses ● Neural Networks ● Flocking birds ● Beating heart cells These are all complex systems with nearest neighbor interactions. These microscale interactions determine the macroscale behaviors of the system, in particular phase transitions.

4. 6/23/20154 Ernst Ising 1900-1998 http://www.physik.tu-dresden.de/itp/members/kobe/isingconf.html 72,500 Articles on ‘Potts Model’ found by Google Scholar Ising, E. Beitrag zur Theorie des Ferromagnetismus. Zeitschrift fr Physik 31 (1925), 253-258.

5. 6/23/20155 The Ising Model Consider a sheet of metal: It has the property that at low temperatures it is magnetized, but as the temperature increases, the magnetism “melts away ” *. We would like to model this behavior. We make some simplifying assumptions to do so. –The individual atoms have a “spin”, i.e., they act like little bar magnets, and can either point up (a spin of +1), or down (a spin of –1). –Neighboring atoms with the same spins have an interaction energy, which we will assume is constant. –The atoms are arranged in a regular lattice. * Mathematicians should NOT attempt this at home…

6. 6/23/20156 One possible state of the lattice A choice of ‘spin’ at each lattice point. Ising Model has a choice of two possible spins at each point

7. 6/23/20157 The Kronecker delta function and the Hamiltonian of a state Kronecker delta-function is defined as: The Hamiltonian of a system is the sum of the energies on edges with endpoints having the same spins.

8. 6/23/20158 The energy (Hamiltonian) of the state of this system is A state w with the value of δ marked on each edge. Endpoints have different spins, so δ is 0. Endpoints have the same spins, so δ is 1.

9. 6/23/20159 The Potts Model Now let there be q possible states…. Orthogonal vectors, with δ replaced by dot product Colorings of the points with q colors States pertinent to the application HealthySickNecrotic

10. 6/23/201510 More states--Same Hamiltonian  The Hamiltonian still measures the overall energy of the a state of a system. 1 1 1 1 1 11 1 1 100 0 0 0 0 0 0 0 0 0 00 0 The Hamiltonian of a state of a 4X4 lattice with 3 choices of spins (colors) for each element. 3 (note—q n possible states)

11. 6/23/201511 The probability of a particular state S occurring depends on the temperature, T (or other measure of activity level in the application) --Boltzmann probability distribution-- Probability of a state 4 The numerator is easy. The denominator, called the Potts Model Partition Function, is the interesting (hard) piece.

12. 6/23/201512 Example The Potts model partition function of a square lattice with two possible spins 4 Minimum Energy States

13. 6/23/201513 Probability of a state occurring depends on the temperature P(all red, T=0.01) =.50 or 50% P(all red, T=2.29) = 0.19 or 19% P(all red, T = 100, 000) = 0.0625 = 1/16 Setting J = k for convenience, so

14. 6/23/201514 Effect of Temperature Consider two different states A and B, with H(A) < H(B). The relative probability of the two states is: At high temperatures (i.e., for kT much larger than the energy difference |D|), the system becomes equally likely to be in either of the states A or B - that is, randomness and entropy "win". On the other hand, if the energy difference is much larger than kT (very likely at low temperatures), the system is far more likely to be in the lower energy state.

15. 6/23/201515 Ising Model at different temperatures Cold Temperature Hot Temperature Images from http://bartok.ucsc.edu/peter/java/ising/keep/ising.htmlhttp://bartok.ucsc.edu/peter/java/ising/keep/ising.html http://spot.colorado.edu/~beale/PottsModel/MDFrameApplet.html Critical Temperature Here H is and energy is

16. 6/23/201516 Monte Carlo Simulations ? http://www.pha.jhu.edu/~javalab/potts/potts.html

17. 6/23/201517 Monte Carlo Simulations B (old) A (change to new) B (stay old) Generate a random number r between 0 and 1.

18. 6/23/201518 Capture effect of temperature High TempLow Temp H(B) < H(A) B is a lower energy state than A exp(‘-’/kT) ~1exp(‘-’/kT) ~ 0 > r, so change states.< r, so stay in low energy state. H(B) > H(A) B is a higher energy state than A exp(‘+’/kT) ~1 > r, so change states.> r, so change to lower energy state. Given r between 0 and 1, and that, with B the current state and A the one we are considering changing to, we have:

19. 6/23/201519 Foams  “Foams are of practical importance in applications as diverse as brewing, lubrication, oil recovery, and fire fighting”.  The energy function is modified by the area of a bubble. Results: Larger bubbles flow faster. There is a critical velocity at which the foam starts to flow uncontrollably 9

20. 6/23/201520 A personal favorite Y. Jiang, J. Glazier, Foam Drainage: Extended Large-Q Potts Model Simulation We study foam drainage using the large-Q Potts model... profiles of draining beer foams, whipped cream, and egg white... Olympic Foam: http://mathdl.maa.org/mathDL?pa=mathNe ws&sa=view&newsId=392 http://www.lactamme.polytechnique.fr/Mosaic/images/ISIN.41.16.D/display.html

21. 6/23/201521 Life Sciences Applications  This model was developed to see if tumor growth is influenced by the amount and location of a nutrient.  Energy function is modified by the volume of a cell and the amount of nutrients. Results: Tumors grow exponentially in the beginning. The tumor migrated toward the nutrient. 7

22. 6/23/201522 Sociological Application  The Potts model may be used to “examine some of the individual incentives, and perceptions of difference, that can lead collectively to segregation …”.  (T. C. Schelling won the 2005 Nobel prize in economics for this work) Variables: Preferences of individuals Size of the neighborhoods Number of individuals 8

23. 6/23/201523 What’s a nice graph theorist doing with all this physics? If two vertices have different spins, they don’t interact, so there might as well not be an edge between them (so delete it). If two adjacent vertices have the same spin, they interact with their neighbors in exactly the same way, so they might as well be the same vertex (so contract the edge) *. * with a weight for the interaction energy e Delete e Contract e G G-e G/e

24. 6/23/201524 Tutte Polynomial (The most famous of all graph polynomials) Let e be an edge of G that is neither a bridge nor a loop. Then, And if G consists of i bridges and j loops, then

25. 6/23/201525 Example =+=++= +++= The Tutte polynomial of a cycle on 4 vertices… 13

26. 6/23/201526 Does the order of contraction/deletion matter? The Dichromatic Polynomial: Can show (by induction on the number of edges) that TheTutte polynomial is independent of the order in which the edges are deleted and contracted. vs. k(A) = 2 |A| = 2

27. 6/23/201527 Thus any graph invariant that reduces with a) and b) is an evaluation of the Tutte polynomial. Proof: By induction on the number of edges. Universality THEOREM: (various forms—Brylawsky, Welsh, Oxley, etc.) If f is a function of graphs such that a) f(G) = a f(G-e) + b f(G/e) whenever e is not a loop or bridge, and b) f(GH) = f(G)f(H) where GH is either the disjoint union of G and H or where G and H share at most one vertex. Then,, where are the number of edges, vertices, and components of G, respectively, and where f ( ) = x 0, and f ( ) = y 0.

28. 6/23/201528 The q-state Potts Model Partition Function is an evaluation of the Tutte Polynomial If we let, then: (Fortuin and Kasteleyn, 1972) The Potts Model Partition Function is a polynomial in q!!! For a loop, note that there are q states, and since both endpoints of a loop necessarily have the same value, the Hamiltonian of each state is 1. Thus, For a single bridge, there are q states where the spins on the endpoints are equal, giving a Hamiltonian of 1. Then there are q(q-1) states where the spins on the endpoints are different, giving a Hamiltonian of 0. Thus,

29. 6/23/201529 Example Compute Potts model partition function from the Universality Theorem result: The Tutte polynomial of a 4-cycle: Let q = 2 and

30. 6/23/201530 A different point of view 1 1 1 1 1 11 1 1 100 0 0 0 0 0 0 0 0 0 00 0 What might we be counting here? Inspiration: A is the set of edges labeled with 1, so these are exactly the number of edges contributing to the Hamiltonian, so give the exponent of v. However, this then means that all the vertices in a component of A must have the same spin, so q # components ways to assign the spins (sort of…). Another reason to believe that

31. 6/23/201531 Important thermodynamic functions such as internal energy, specific heat, entropy, and free energy may all be derived from the Potts Model partition function, U=Internal Energy (sum of the potential and kinetic energy): C=Specific heat (energy to raise a unit amount of material one degree): S=Entropy (a measure of the randomness and disorder in a system): F=Total free energy: Thermodynamic Functions

32. 6/23/201532 Phase Transitions For convenience, work with the dimensionless, reduced free energy: Reduced free energy per unit volume (or in this context, per vertex): For a fixed graph G, this is clearly an analytic function in both q and T. Any failures of analyticity can only occur in the infinite volume limit.

33. 6/23/201533 The infinite volume limit Let {G} be an increasing sequence of finite graphs (e.g. lattices). The (limiting) free energy per unit volume is: Phase transitions (failure of analyticity) arise in the infinite volume limit. Temp Energy

34. 6/23/201534 The antiferromagnetic model at zero temperature Now low energy  lots of edges with different spins on endpoints. At zero temperature, low energy states prevail, i.e. we really need to consider states where the endpoints on every edge are different. Such a state corresponds to a proper coloring of a graph. A E DC B J is negative in the antiferromagnetic model, so minimal energy states have a maximum number of zeros in the summation, i.e. every edge has endpoints with different spins. If we think of the spins as colors, a minimum energy state is then just a proper coloring of the graph.

35. 6/23/201535 The Chromatic Polynomial counts the ways to vertex color a graph: C(G, n ) = # proper vertex colorings of G in n colors. + = G G/e G-e Recursively: Let e be an edge of G. Then, Chromatic polynomial

36. 6/23/201536 Example - = n(n-1) 2 +n(n-1) + 0 = n 2 (n-1) n(n-1) 2 + + = = Since a contraction-deletion invariant, the chromatic polynomial is an evaluation of the Tutte polynomial:

37. 6/23/201537 The connection Note: Recall: with These are the same function precisely when that is, when which is exactly the zero-temperature model.

38. 6/23/201538 Another connection Consider the summands of as, and hence A summand is 0 except precisely when in which case it is 1. Thus simply counts the number of proper colorings of G with q colors.

39. 6/23/201539 Zeros of the chromatic polynomial Thus, phase transitions correspond to the accumulation points of roots of the chromatic polynomial in the infinite volume limit. In the infinite volume limit, the ground state entropy per vertex of the Potts antiferromagnetic model becomes:

40. 6/23/201540 Locations of Zeros Mathematicians originally focused on the real zeros of the chromatic polynomial (the quest for a proof of the 4-color theorem…) Physicists have changed the focus to the locations of complex zeros, because these can approach the real axis in the infinite limit. Now an emphasis on ‘clearing’ areas of the complex plane of zeros.

41. 6/23/201541 Some zeros (Robert Shrock)

42. 6/23/201542 What happens if…. Interaction energy depends on the edge? Depends on whether the edge is contracted or deleted? Depends on whether the edge is a bridge or a loop? What if no longer multiplicative? (!) There is an external field? Fortuin and Kasteleyn, Traldi, Zaslavsky, Bollobas and Riordan, Sokal, E-M and Traldi, E-M and Zaslavsky….

43. 6/23/201543 Life gets interesting… No longer necessarily get a well-defined function. There are necessary and sufficient conditions on the relations among the edge-weights to guarantee this. These conditions essentially live on three small graphs:

44. 6/23/201544 Can lose mulitiplicativity…. Essential characteristics encoded by contraction/deletion Still need relations to assure well-defined BUT… Retain universality properties and that a function is determined by action on ‘smallest’ objects (all discrete matroids not just a single bridge/loop).

45. 6/23/201545 Thank you for your attention! Questions?