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Scarlet Runner Bean Genome Annotation: Contig 257429.

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Presentation on theme: "Scarlet Runner Bean Genome Annotation: Contig 257429."— Presentation transcript:

1 Scarlet Runner Bean Genome Annotation: Contig

2 Predicted genes (Fgenesh, Genscan, Genemark)

3 Genes supported by ESTs Fgenesh, Genscan, Genemark EST

4 Contig Annotation FgeneshBlastptBlastnDescription Gene1NSig2e^-55 g1 Cowpea 524B Mixed Tissue and Conditions cDNA Gene2NSig1e^-39 Royal Gala 24 DAFB fruit Malus x domestica cDNA clone Gene3 hypothetical protein [Populus trichocarpa] 0.0 1e^-136 Festuca pratensis cDNA clone Gene 41e-209e^-18 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA GenscanBlastptBlastnDescription Gene 13e^-06 Gene 2 2e-15 1e-35 cotyledon and young leaves of peanut Arachis hypogaea cDNA Gene 3NSig (1.2) 1e-37Peach shoot Prunus persica cDNA clone Gene 4 hypothetical protein [Populus trichocarpa] 3e-155 1e-124Ruby Orange Developing Seed cDNA Library Gene 5 hypothetical protein [Populus trichocarpa] 6e-12 3e-11Cotton Normalized Library Gene 1 GenemarkNsig Gene 35e^-23 Glycine max cDNA 5', mRNA Gene 4 3e-43 hypothetical protein [Vitis vinifera] 7e-35 cotyledon and young leaves of peanut Arachis hypogaea cDNA Gene e-63 cotyledon and young leaves of peanut Arachis hypogaea cDNA Gene 6Nsig Gene e-35Royal Gala 24 DAFB fruit Gene 8Nsig Gene 9Nsig Gene 10Nsig Gene 11Nsig ( 0.91 ) 1e-26Glycine max cDNA clone Gene 12 [Populus trichocarpa] (0.0) 9e-151 Trichome isolated from the female flower at mid-developmental stage Gene 13Nsig Gene 14Nsig Gene 15Nsig 2e-15 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA

5 Contig Annotation Genemark Gene 1 Gene 2 Nsig Gene 35e^-23Glycine max cDNA 5', mRNA Gene 43e-43 hypothetical protein [Vitis vinifera] 7e-35 cotyledon and young leaves of peanut Arachis hypogaea cDNA Gene e-63 cotyledon and young leaves of peanut Arachis hypogaea cDNA Gene 6Nsig Gene e-35Royal Gala 24 DAFB fruit Gene 8Nsig Gene 9Nsig Gene 10Nsig Gene 11Nsig (0.91 )1e-26Glycine max cDNA clone Gene 12[Populus trichocarpa] (0.0)9e-151 Trichome isolated from the female flower at mid- developmental stage Gene 13Nsig Gene 14Nsig Gene 15Nsig 2e-15 Cotton fiber

6 Contig Annotation

7 Genes supported by ESTs Fgenesh, Genscan, Genemark EST


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