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What is PACS ? P: Picture, Images & Reports

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Presentation on theme: "What is PACS ? P: Picture, Images & Reports"— Presentation transcript:

1 What is PACS ? P: Picture, Images & Reports
A: Archive, Online, Near line, Offline C: Communication, Networking, Transfer Protocols S: System, Components & Architecture PACS: for storage and distribution of images and information when necessary

2 PACS: Small or Large Web Server Distribution

3 Scale of PACS No. of Beds in Hospital/ Exams per year
No. of Modalities No. of Switches Considerations: System connectivity, expandability, reliability and cost-effectiveness Connection among various hospital information system, open architecture, Data migration is painful enough if you have money

4 Types of images 1D, 2D, 3D, 4D Different DICOM Modality type: Cardiac / PET / 4D U/S….. Image size: Resolution and bit depth Image quality: Bit Depth and resolution Color / Monochromatic Exam. Size: image size x no. of images Structured Reports New DICOM IOD: Endoscopic & Microscopic images / ECGs / Security Profiles….. IOD=information object definition; Mammo CAD use SR output; DICOM waveform IOD; DICOM visible light IOD; Digital Envelop over Digital Signature

5 1D, 2D, 3D, 4D, fusion

6 1D, 2D, 3D, 4D, fusion

7 Image Resolution/ Bit depth
U/S DF CR CR Mammogram 256 x 256 8 bit 65 KBytes 1k x 1k 10 bit 1.25 MByte 2k x 2.5k 12 bit 7.5 MByte 4k x 5k 12 bit 30 MByte

8 Properties of image Bit depth Grayscale or color Resolution in pixel
Example image size of mammogram = 4k x 5k x 12 bit = 30 MB Microcalcification need 130 µm resolution

9 PACS Architecture

10 PACS – Central Architecture
DICOM Modality Diagnostic Workstations (DICOM) Clinical Workstations (DICOM) Image Server (RAID) Gateway or Frame Grabber Diagnostic Workstation Non-DICOM Modality Film Digitizer Web Server Data Base Server CR/ DR QA Workstation Archive Computed Radiography or DR RIS

11 Central Architecture Image Server and Database Manager is the HEART
Any image, any where, any time Unique central copy Easy update of data Requires high performance servers Potential single point of failure at server Bandwidth demanding

12 PACS – Distributed Architecture
DICOM Modality Gateway or Frame Grabber Diagnostic Workstations (DICOM) Clinical Workstations (DICOM) Web Server Non-DICOM Modality CR QA Workstation Diagnostic Workstation Film Digitizer Data Base Server Archive Computed Radiography RIS

13 Distributed Architecture
Exams are routed from modality to selected workstations Complex routing algorithms based on department / user preference Difficult to support concurrent review of images Less destructive for failure at database server

14 Components of PACS HIS/ RIS Broker ePR gateway Database Server
Image Server (RAID) Long Term/ Near line Archive Networks Digitizer

15 Components of PACS Acquisition Gateways Non-DICOM modality gateway
DICOM Print Server Media Server Reporting Server Monitor QC Server Web Server Workstations

16 PACS layout 1

17 PACS layout 2 All in blue must mention

18 PACS layout 3

19 PACS Components Image Server (RAID) ePR gateway Enterprise Archive
DICOM Modality Diagnostic Workstations (DICOM) Through Acq. gateway W/S QA Server Clinical Workstations (DICOM) Image Server (RAID) Gateway or Frame Grabber Diagnostic Workstation Non-DICOM Modality Film Digitizer Web Server Data Base Server CR/ DR QA Workstation LTS Archive SAN/NAS Computed Radiography or DR Media Server Broker for RIS/HIS

20 Acquisition (DICOM) Gateway
HIS/RIS Interface (Broker) DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

21 Role of Acquisition gateway
Compression/ decompression and security Check the images for integrity Convert to PACS format (header, byte-order, matrix size) Queue for images (priority) to database server (background) Share the workload and no point of failure for multiple Acquisition gateway

22 Database Server and Image Server
RAID Database Server HIS/RIS Interface (Broker) DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

23 Database Server (PACS controller)
The Heart of the system Integration cross point between HIS/RIS and PACS (status update) Create and manages patient folders Manage reading worklists and user profiles Manage data transfer within the system Support data mining and teaching folders

24 Image Server (RAID) Online (rapid access) exam storage and distribution device Support simultaneous exam input and output transfer operations Up to Three months of storage capacity Scalable capacity

25 What is RAID Redundant Array of Independent Disks
Bandwidth equal to sum of disk transfer rates Highest speed disk storage available Hot Swap 2 MB/s 1 2 3 4 5 6 16 MB/s 7 8 Image Parity Disk Array

26 RAID 5 configuration If disk fails, disk can be rebuilt- fault tolerant High data transfer rate for read, write slower Min. 3 disks to start Array capacity is N-1

27 Bandwidth Bandwidth is a measure of the information (data) carrying capacity of a network 10/100/1000 MB/sec Information Flow Data Pipe (Network)

28 Network Bottleneck The bandwidth of an information delivery system is limited to the bandwidth of the slowest component in the system Network Bottleneck

29 Data Compression Data compression reduces the information rate
a network must support Uncompressed Data Compressed Data

30 Lossless Image Compression
I - D = 0 I D Decompressed image is identical to original image JPEG lossless compression Average compression of 2:1 for x-ray images

31 JPEG 2000 Compression Selected parts of the image can be defined as Regions of Interest, they can then be delivered before other parts of the image, or losslessly, whilst other parts of the image that are less critical use normal lossy compression JPEG 2000 codestream can be ordered to deliver images of lower resolution before the full image can be transmitted Motion JPEG 2000 does not have any form of extrapolation (and hence potential distortion) in the time domain.  Each frame is a separate JPEG 2000 coded image

32 JPEG 2000 images

33 Storage Device (Long Term)
RAID Database Server MOD DLT HIS/RIS Interface (Broker) DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

34 Types of storage media Media DVD MOD DLT 9840 AIT2 GB Cost
WORM DLT 9840 AIT2 GB 3.8 5.2 35 20 50 Cost Less Expen. Expen. Cheap Most Expen. Load + Assess Very fast 113 sec 15 sec 45 sec Max. T rate MB/s 5 5.1 10 6

35 Long Term Archive Used to store digital data for longer periods of time Storage ranges from 100 MB to 10 TB Optical disk most common media - 5 1/4” MOD - 2.6 GB and 5.2 GB Capacity DLT used for longer term storage and redundancy ISP module

36 Storage Device (Near line)
RAID Database Server SAN/NAS MOD DLT HIS/RIS Interface (Broker) DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

37 Storage Area Network SAN is a high-speed sub-network of shared storage devices Contains storage device (disk) for storing data SAN's architecture works in a way that makes all storage devices available to all servers Use of Fiber Channel High scalability for additional storage and redundant networks PCs Storage devices

38 Network Area Storage NAS is a class of dedicated hard disk-based storage devices which provide LAN users with additional disk storage through a standard network connection In most cases, a NAS device (or NAS server) receives an IP address, connects to the LAN through an Ethernet cable, and resides on the LAN as an independent network device Users are not demanding the server's processing time for mundane storage tasks -- often improving the performance of local application servers NAS systems also include some onboard memory (RAM) to cache network data to or from the disks

39 SAN Vs NAS Difference between NAS and SAN is subtle
NAS devices are big, single purpose storage appliances that you plug into network NAS sits between your application server and your file system As perform only 1 task, can serve files very fast NAS is network-centric SAN is a defined architecture that sits between your file system and your underlying physical storage SAN is data-centric

40 Display MOD DLT SAN/NAS DG RIS W/S PCs CR QA CT MR R&F NM CR XRAY US
RAID HIS/RIS Interface (Broker) Database Server MOD DLT Diagnostic W/S Dedicate W/S SAN/NAS DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

41 Workstations Four Primary Categories
- Advanced Analysis: Used by specialists for advanced diagnosis - 3D, volume rendering Diagnostic: For primary diagnosis; located in reading rooms; high-end 2K monitors Clinical: Used by clinicians and staff to consult; ICU / ER applications; less costly than diagnostic; 1K monitors At Home Review: low-end; PC based; cost-effective; review application; lossy compressed for faster transmit

42 Standalone Vs direct PACS w/s
Standalone Workstation Direct PACS Client Workstation Hard Disk Storage Yes, varies Minimal Query PACS number All PACS system (CT, ACC, Angio.) Single PACS system (ACC PACS) Retrieval mechanism DICOM Q/R and association made with different vendors Direct attached, same vendor Retrieval time Slower Faster Diagnostic value Depends on Monitor Grade and Modules like MPR, 3D etc Suggested usage for meeting/museum purpose for single modality image reviewing and reporting like Radworks in U/S Rm Direct PACS workstation for reporting

43 Web distribution High availability, low cost
Reports / select images to referring physician desktop Point of integration with electronic patient record Lossy compression for performance Potential for TeleRadiology Security issues to be resolved

44 RIS, HIS, ePR and PACS integration

45 Broker HIS/RIS and PACS interface
DG RIS W/S PCs CR QA Film Digitizer Frame Grabber CT MR R&F NM CR XRAY US

46 Hospital Information System
Support clinical and medical patient care activities in the hospital Administer the hospital’s daily business transactions like finance, payroll etc Evaluate hospital performances and costs and make long-term forecast

47 Clinical System in HA, HK
Patient Administration In-Patient and Out-Patient Administration System Accident & Emergency Information System Medical Record Abstract System Medical Record Tracking System Clinical Support Laboratory Information System Radiology Information System Pharmacy Management System Dietetics Catering Management System Clinical Management Clinical Management System (In-Patient) Discharge Summary Clinical Management System (Out-Patient) Electronic Patient Records Clinical Data Analysis and Reporting System

48 Non-Clinical System in HA
Human Resources and Payroll Systems Hospital Based Financial System Materials Management System Patient Billing and Revenue Collection System Executive Information System Code 9 and view codes

49 Radiology Information Systems
Similar to HIS but of smaller scale Interfaces to PACS based on HL7 Department administrative management - Scheduling and Film tracking - Resource management and reporting - Monitor patient status Link to Hospital Information System (HIS) - Billing and Master Record Link to Clinical Management System (CMS) - Prefetch for Clinical visit - ePR integration

50 RIS workflow Exam Order Exam Scheduled Web distribution to referring
physicians RIS Modality Worklist Demographics Downloaded Patient Exam Is Performed Images copied on web-server Order Event Images transferred in STS Database server /Archive Prefetch Exams From Storage PACS Worklist Updated Images / Prior Reports Exam Read Dictated status Image migration STS to LTA Final report available Report Verified Preliminary status Exam Transcribed

51 Broker service Database server DR HA HIS CR HA RIS HA CMS US DF Mitra
ADT CR Mitra PACS Broker interface HA RIS Appt., X-ray request HA CMS Clinical visit US DF Database server Modalities: Get WORKLIST Get REPORT, Get INFO

52 Broker service A restricted access account will be created at Sybase that gives limited authority for the DICOM Broker solely for the purpose of the interfaces In general, for data flow from RIS to the Broker, the RIS write the supported events to the table, and the Broker polls against the events table and calls the associated stored procedures for the conversion to DICOM messages

53 Broker service Broker main function: - Worklist generation
- Reports storage Registration + Post exam data capture (RIS) Acc # generation + call broker for update Need SOME time!! Modalities query Broker for worklist update Broker poll RIS event table and convert to DICOM info

54 ePR Architecture Selected images from individual hospital’s PACS are sent make use of the ePR record indexing and browsing capabilities to read the radiology images through CMS workstations

55 Data Flow Diagram RIS ePR HA system Appointment Attendance
Exam records Reports (15mins) CMS RIS operational data ePR Web Server PACS Attendance Exam & workload units (daily) RIS statistical data Data warehouse Non clinical system

56 Characteristics of ePR
Near instant image review Web distribution can be within hospital, to other hospitals or even private clinics TeleRadiography possible Update of patient information Lossy Vs lossless Broken pathway 15 minutes time lag

57 Guidelines for HIS, RIS, PACS interface
Each system remain unchanged in its configuration and function, only data are shared Identify the subset data to be shared and set up access rights/ authorization Convert the subset data to HL7 standard Define transfer protocol (TCP/IP or DICOM)

58 Typical patient and data flow
Admission: Patient registration, notify HIS (HL7) Order entry/Arrival: Schedule exam and notify RIS Broker notified and PACS database server updated (prefetch) DICOM worklist to modality Exam completed: data to DICOM gateway (MPPS) Information/images to database/image server through gateway (DICOM store) Images stored in PACS archive Images to workstations from PACS archive Dictation, transcription etc: workstation to RIS/PACS RIS reporting and PACS updated for reports Transfer: HIS/RIS to PACS, images to other PACS Discharge: HIS/RIS to PACS, images rub out

59 Mobile PACS

60 What is DICOM? The standard for Digital Imaging and Communications in Medicine. Developed by the National Electrical Manufacturers Association (NEMA) in conjunction with the American College of Radiology (ACR). Covers most image formats for all of medicine. Specification for messaging and communication between imaging machines.

61 A little history The first version was ACR-NEMA, released in 1985.
Its goal in developing a standard was To enable users to retrieve images and associated information from digital imaging equipment in a standard format using point-to-point connection. To hide differences same across multiple image equipment manufacturers. To handle developing network and image standarts, a new standard, DICOM, was proposed in 1981.

62 DICOM Application Domain
MAGN ETOM Information Management System Storage, Query/Retrieve, Study Component Query/Retrieve Results Management Print Management Media Exchange LiteBox

63 Summary of DICOM Features
NETWORK PROTOCOL DICOM incorporates negotiation to permit peers to agree on the functions to be performed MESSAGE ENCODING DICOM defines 24 data types (V2.0 had 4) DICOM message encoding includes JPEG compression (17 varients) DICOM supports multiple character repertoires

64 Summary of DICOM Features
OBJECT DATA MODEL DICOM is based on a completely specified data model DICOM includes a robust UID mechanism DATA DICTIONARY DICOM includes a large number of new data elements SERVICE CLASSES DICOM defines classes of service for specific applications (e.g. image management, printing) and conformance levels

65 DICOM Objects Things such as images, reports, and patients are all objects and are called information objects. Two kinds of objects in DICOM: Composite objects (Old objects inherited from NEMA). Normalized objects (New objects defined in DICOM). All objects and their format constitutes Data Dictionary. DICOM uses UIDs to identify information objects, such as the images, reports, or transfer syntaxes. The form of the UID conforms to an international standard. is the root and the same for every DICOM UID. Example: UID for the DICOM explicit VR little endian transfer syntax is

66 DICOM Service Classes Composite Verification Storage Query/Retrieve
Study Content Notification Normalized Patient Management Study Management Results Management Basic Print Management

67 Hardcopy Image Reading + Dictation/Transcription (Use Case 1)
Hardcopy Reading Hardcopy DICOM Print as Seen at Modality Reporting: RIS-Based Transcription / Validation of Narrative Report RIS-Based Report Storage and Management Send Reports Query Prior Reports

68 Hardcopy Image Reading + Dictation/Transcription (Use Case 1)
Report Storage / Mgmt. Report Repository RIS Electronic Report Paper print/ Mail/ Fax/ send Narrative Info Only Electronic Report query Acquisition Transcription & Correction print Validation Filming Film Archive Hardcopy Interpretation & Dictation manual network DICOM HL7/other optional

69 Hardcopy and Softcopy Image Reading + Dictation/Transcription (Use Case 2)
Hardcopy Reading Hardcopy DICOM Print as Seen at Modality Softcopy Reading Hardcopy DICOM Print as Seen During Softcopy Reading Reporting: RIS-Based Transcription / Validation of Narrative Report RIS-Based Report Storage and Management Send Reports Query Prior Reports

70 Hardcopy and Softcopy Image Reading + Dictation/Transcription (Use Case 2)
store Selected Images Softcopy Interpretation & Dictation Report Storage / Mgmt. Report Repository RIS Electronic Report Paper print/ Mail/ Fax/ send Electronic Report Narrative Info Only query Acquisition Transcription & Correction print Validation Filming Film Archive Hardcopy Interpretation & Dictation manual network DICOM HL7/other optional

71 Acquisition Workflow Support + Burn CD/DVD (Use Case 3)
Image Acquisition: RIS-based Acquisition Workflow Support (Modality Worklist) Image Reading: Hardcopy Reading Hardcopy DICOM Print as Seen at Modality Softcopy Reading Hardcopy DICOM Print as Seen During Softcopy Reading DICOM Store Images -> Burn CD/DVD Reporting: RIS-Based Transcription / Validation of Narrative Report RIS-Based Report Storage and Management Send Reports Query Prior Reports Optional DICOM Store Reports -> Burn CD/DVD

72 Hardcopy and Softcopy Image Reading + Dictation/Transcription (Use Case 3)
Modality Worklist store Selected Images Softcopy Interpretation & Dictation Report Storage / Mgmt. Electronic Report Report Repository RIS Paper print/ Mail/ Fax/ send Electronic Report Narrative Info Only query Acquisition Transcription & Correction print Burn CD/DVD Off-Line Archive Validation store Filming Film Archive manual network DICOM HL7/other optional Hardcopy Interpretation & Dictation

73 PACS for Management of DICOM Persistent Objects (Use Case 4)
Image Acquisition: RIS-based Acquisition Workflow Support (Modality Worklist) Image Reading: Hardcopy Reading Hardcopy DICOM Print as Seen at Modality Softcopy Reading Hardcopy DICOM Print as Seen During Softcopy Reading DICOM Store Images for Burning CD/DVD PACS-based Storage and Management of DICOM Persistent Objects Archive Imaging Studies Query Prior Imaging Studies Reporting: RIS-Based Transcription / Validation of Narrative Report RIS-Based Report Storage and Management Send Reports Query Prior Reports Optional DICOM Store Reports for Burning CD/DVD

74 PACS for Management of DICOM Persistent Objects (Use Case 4)
Modality Worklist store Object Storage / Mgmt. Electronic Report Electronic Report Selected Images Report Repository RIS Paper print/ Mail/ Fax/ send Softcopy Interpretation & Dictation query Narrative Info Only Transcription & Correction Image Repository PACS Acquisition store Validation print store q/r store Off-Line Archive Filming Burn CD/DVD Film Archive Hardcopy Interpretation & Dictation manual network DICOM HL7/other optional


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