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ISMB Demo, 01 July 2009 Franck Tanoh University of Manchester, UK.

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Presentation on theme: "ISMB Demo, 01 July 2009 Franck Tanoh University of Manchester, UK."— Presentation transcript:

1 http://www.biocatalogue.org ISMB Demo, 01 July 2009 Franck Tanoh University of Manchester, UK

2 Public, Curated Catalogue of Life Science Web Services Register, Find, Curate Web Services Community-sourced annotation, expert oversee Open content Open platform with open REST interfaces Web 2.0 site and development. Open source code base. Started June 2008. Bottom Line

3 Why? Scientific Workflow Management System Socially share, discover and reuse workflows Service provider

4 Why? Guessimate 3000+ Web Services in Life Science publicly available Where… can I find them? advertise? What… do they do? Can I use them? How… do they work? operational profile? up to date? Who… provides them? recommends them?

5 Content Community contributed –Service providers –Third Parties Automated crawling Sourced from partners and registries Chiefly public services

6 Curation Mixed: Free text, Tags, controlled vocabs, community ontologies Community sourced tags, comments, recommendations Expert curation ontology-based annotation. myGrid OWL Ontology Automated WSDL ripping and analytics Automated monitoring & testing Partner feeds (e.g. myExperiment) Update feeds to users

7 Let’s see Demo

8 Next? Public APIs - RESTful APIs to BioCatalogue Full EMBRACE registry import. Subscribe to a service - RSS/ATOM feeds for services Integration with myExperiment “Try it now” service functionality - Ability to test and play with a service within the BioCatalogue interface before using it. Integration with Taverna - Ability to import Web Services and annotations to and from BioCatalogue and Taverna. myBioCatalogue - Ability to set up your own local BioCatalogue registry. BioMoby services support - Register and search for BioMoby services. Support for DAS services Curation workbench/tools - New curation tools designed for expert curators. --- Roadmap: http://www.biocatalogue.org/wiki/doku.php?id=public:roadmaphttp://www.biocatalogue.org/wiki/doku.php?id=public:roadmap

9 Who?

10 Credits Thomas Laurent Hamish McWilliams Franck Tanoh Jiten Bhagat Carole Goble Rodrigo Lopez Eric Nzuobontane Steve Pettifer Katy Wolstencroft Robert Stevens David De Roure


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