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1 SSC 2006: Case Study #2: Obstructive Sleep Apnea Rachel Chu, Shuyu Fan, Kimberly Fernandes, and Jesse Raffa Department of Statistics, University of British.

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Presentation on theme: "1 SSC 2006: Case Study #2: Obstructive Sleep Apnea Rachel Chu, Shuyu Fan, Kimberly Fernandes, and Jesse Raffa Department of Statistics, University of British."— Presentation transcript:

1 1 SSC 2006: Case Study #2: Obstructive Sleep Apnea Rachel Chu, Shuyu Fan, Kimberly Fernandes, and Jesse Raffa Department of Statistics, University of British Columbia

2 2 Objectives 1.To compare the sensitivity and specificity of the Berlin Questionnaire (BQ) when comparing the first and second night RDI outcomes. 2.To determine if an abbreviated BQ can be developed with similar sensitivity and specificity. 3.To determine if sensitivity and specificity of the BQ are a function of gender. 4.To ascertain if a battery of questionnaires in addition to the BQ can improve sensitivity and specificity in women.

3 3 Objective #1 – First Night vs. Second night First NightSecond NightEither Night RDI >10RDI <=10RDI >10RDI <=10RDI > 10RDI <=10 BQ = HR 165914622153 BQ = LR 114411431440 Sensitivity 0.590.560.60 Specificity 0.430.410.43 The sensitivities and specificities for the first, second, and either nights are very similar The first night does not appear to be any less accurate than the second night – in fact, the opposite may be true (the first night may be better).

4 4 ROC Curve Hypothesis Testing We assessed the accuracy of study’s questionnaires by comparing the area under the Receiver Operator Characteristic Curve (ROC). The ROC curve plots sensitivity vs. the false positive rate for all possible cut-offs. The Area Under the Curve (AUC) is a method frequently used to assess accuracy of questionnaires. In our case, the ROC curves are correlated. We take a Non-Parametric approach developed by Delong, et al (1988) for hypothesis testing involving the AUC for two or more correlated ROC curves. This method uses generalized U-statistics to estimate the covariance matrix.

5 5 Objective #2 – An Abbreviated BQ We gave each question on the BQ equal weight, and removed the structure imposed by the questionnaire’s categories – effectively making it a questionnaire with a maximum score of 11. We used a backwards selection-type algorithm. –Start off computing the AUC of the ROC curve involving all 11 items. –Do hypothesis testing on each of the 11 smaller 10 item questionnaires compared to the 11 item questionnaire. –Eliminate all questionnaires which have a statistically significant smaller AUC –Take the 10-item questionnaire with the largest AUC, and repeat for all 9-item questionnaires. –If all questionnaires are determined to have smaller AUCs, keep the larger questionnaire, and proceed to the group of questionnaires with a smaller number of items. –Repeat for all questionnaires with a smaller number of items. After the final questionnaire has been selected, it was tested against the largest questionnaire (11 items).

6 6 Objective #4 – Battery of Questionnaires To combine the data from each questionnaire, we computed the risk score: P(OSA | Questionnaire Responses) The risk score has been shown to maximize the ROC curve at every point (McIntosh and Pepe, 2002). The risk score was computed using logistic regression with each test as predictors in the model. The fitted values from this model were then used as the composite questionnaire result. ROC curves were then constructed, and the AUC was tested as previously described.

7 7 Objective 3: Gender Differences Logistic regression was carried out with specificity and sensitivity as the response Models consisting of subsets of the variables in various forms (binary, quartiles, continuous) were considered: Gender, Alcohol, Caffeine, Age, Systolic, Diastolic, BMI, Neck Size Larger models were refined by dropping insignificant variables using the likelihood ratio test For Sensitivity: BQHigh = Berlin Questionnaire classifies a patient as High Risk High Risk = RDI > 10 P(BQHigh | Gender, High Risk, and other variables) For Specificity: BQLow = Berlin Questionnaire classifies a patient as Low Risk Low Risk = RDI <= 10 P(BQLow|Gender, Low Risk, and other variables)

8 8 Conclusions Hypothesis #1: –The Sensitivity (0.59) and Specificity (0.43) of the Berlin Questionnaire were quite low compared to results found in Neltzer et al., 1999 (Sensitivity = 0.86, Specificity = 0.77) –Based on sensitivity and specificity, the second night does not demonstrate a higher correlation to the Berlin Questionnaire over the first night Hypothesis #2: –We were able to reduce the original questionnaire to three items (#2, #5, and #10) –Such a questionnaire had a larger AUC compared to the original questionnaire (0.7 vs. 0.5, p-value <.01)

9 9 Conclusions Hypothesis #3: –Sensitivity: BMI and neck size are important covariates when modelling Sensitivity vs. Gender. Being male vs. female reduces the sensitivity of the Berlin Questionnaire in all models, but gender effect is only significant when neck size is included in the model [95% CI for odds ratio: (4.43e-05, 0.29)] –Specificity: Gender does not appear to affect the specificity of the Berlin Questionnaire when accounting for the most important covariate, BMI (p-value 0.17). Hypothesis #4: –Adding questionnaires to the Berlin Questionnaire did improve performance as measured by the AUC –In particular, the AIS Questionnaire was found to be particularly useful (despite AIS being negatively associated with sleep apnea) –The best composite questionnaire in all patients was the Berlin Questionnaire and AIS (AUC = 0.65). –In women, the largest composite questionnaire (all questionnaires) was not statistically different than the Berlin Questionnaire alone (p-value 0.34).

10 10 Acknowledgements We would like to thank: Dr. Alison Gibbs Dr. Sharon Chung Dr. Michael Schulzer Dr. John Petkau Dr. Harry Joe


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