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Cracking the NRPS Code Nick Till Computational Biology 12-15-2015.

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Presentation on theme: "Cracking the NRPS Code Nick Till Computational Biology 12-15-2015."— Presentation transcript:

1 Cracking the NRPS Code Nick Till Computational Biology 12-15-2015

2 Proteins without Genes Tyrocidine Vancomycin

3 Nonribosomal Peptide Synthesis Taken without permission from J. Christopher Anderson

4 A-domain Recognition Site Chem. And Biol. 1999, 6, 493-505

5 A-domain Sequences

6 Machine Learning Approach

7 Information Content in 10-mers

8 Prediction Results

9 Conclusion Predictor works for about 50% of sequences picked at random IC Bar Charts show some explanation for some poor predictions A more intricate weighting function for the Hamming Distance could improve prediction power.

10 Signatures Chem. And Biol. 1999, 6, 493-505


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