1. Today: Authorship and Conflicts of Interest Homework 2 due in class on M 10/11 or T 10/12 Homework 4 due in lab on Th 9/30 or M 10/4

2. Year 1 Fall Research Methods (may count for science electives) Year 1 Spring Research Experience (lower div. lab credit – 3 credits) Year 1 SummerIndependent Research (optional) Year 2 FallIndependent Research (upper div. research credit) Year 2 SpringMentoring, Presentation and Placement FRI Program Timeline

3. FRI Stream Selection Timeline 9/15 –10/13 Soon 9/30–10/6 10/10 10/22 10/25 Open House visits HW #2 Research Stream Handbook (see website) FRI Information sessions (times listed online) Overview of the stream sort process, Question session Stream application due. Select your top four stream preferences. Include reasons for your choice, and any credit and/or scheduling concerns Stream assignments are announced Start of Spring 2010 registration You register yourself in your stream course(s).

4. Th, Sept. 30, 2010 5-6 pm PAI 3.02 F, Oct. 1, 2010 3-4 pm PAI 3.02 T, Oct. 5, 2010 2-3 pm JGB 2.216 W, Oct. 6, 2010 5-6 pm WEL 2.224 Explanation of the process with opportunity for questions. Required for all who wish to continue in FRI next Spring. If you have a true conflict with all four sessions, email Sarah Simmons. Stream selection preference will be given to those who attend a session. Make sure you sign up to show you were there. FRI Information Sessions

5. Which Stream is right for you? http://fri.cns.utexas.edu/research-streams

6. Authorship: giving correct and appropriate credit for work done is important. Do not want to ignore someone’s contribution Do not want to overemphasize someone’s minor contribution How to decide what type of credit to give? Based on- Scientific Integrity: an Introductory Text with Cases, 2nd ed. (2000) Marcina, F. L. ASM Press, Washington, D.C.

7. Authorship criteria: Experimental, technical, and/or intellectual contribution to work

8. Types of credit: Authorship Acknowledgement

9. Authorship criteria are not universal or always well-defined: from Cell The corresponding author is responsible for ensuring that all appropriate contributors are listed as authors and that all authors have agreed to the manuscript’s content and its submission to Cell. In a case where we become aware of an authorship dispute, authorship must be approved in writing by all of the parties.

10. Authorship criteria are not universal or always well-defined: from Science All authors must agree to be so listed and must have seen and approved the manuscript, its content, and its submission to Science.

11. Authorship criteria are not universal or always well-defined: from Nature Authors are strongly encouraged to include a statement in the end notes to specify the actual contribution of each coauthor to the completed work.

12. Publications can lead to: Jobs Promotions and/or raises (academically to tenure or full professor) Grants Prestige “Surely you were aware when you accepted the position, Professor, that it was publish or perish?”

13. One aspect of counting number of publications is authors who divide work into multiple papers.

14. Instead of publishing a single cohesive article, the work is divided in multiple articles. Can add to number of publications, but each article may be published in a lesser journal than the cohesive article would have been.

15. One aspect of counting number of publications is authors who divide work into multiple papers. Instead of publishing a single cohesive article, the work is divided in multiple articles. Can add to number of publications, but each article may be published in a lesser journal than the cohesive article would have been. Not unethical, but also not ethical or helpful for advancing research.

16. Who should be an author?

17. Produced experimental data Provided ideas or oversight Analysis of data

18. Generally not worthy of authorship Editing manuscript Providing funding, equipment, material, or lab space Group leader or manager without providing direct supervision or advice Routine technical work

19. First author: Did the most work toward publication Other authors typically listed in order of quantity or significance of work performed

20. Senior author: Can be first author or supervisor (last author) Decides coauthors and author order Assumes responsibility for all data and conclusions in paper -can be difficult in interdisciplinary work Submits and corresponds with journal

21. What responsibility do authors have for conduct of other authors? If one author is guilty of misconduct, and all authors responsible?

22. Authors must list affiliations and any conflicts of interest

23. Authors must list affiliations and any conflicts of interest from Cell: Cell requires all authors to disclose any financial conflict of interest that might be construed to influence the results or interpretation of their manuscript. Authors must declare any such conflict in the cover letter accompanying the manuscript and in the Acknowledgments section of the manuscript itself. As a guideline, any affiliation associated with a payment or financial benefit exceeding $10,000 p.a. or 5% ownership of a company or research funding by a company with related interests would constitute a conflict that must be declared.

24. Where does money come for funding research, and what strings are attached?

25. Monsanto and universities: The Iowa State University Research Foundation (ISURF) and Monsanto Company announced an agreement today (http://www.prnewswire.com/cgi-bin/stories.pl?ACCT=104&STORY=/www/story/09-04-2007/0004655996&EDATE=) University of Illinois and Monsanto Establish Monsanto Fellows in Plant Breeding (http://www.reuters.com/article/pressRelease/idUS144915+16-Apr-2008+PRN20080416)http://www.reuters.com/article/pressRelease/idUS144915+16-Apr-2008+PRN20080416 Washington University in St. Louis, Monsanto Co., awarded crop protection patent (http://news.bio-medicine.org/biology-news-2/Washington-University-in-St--Louis---Monsanto-Co---awarded-crop-protection-patent- 3939-1/)http://news.bio-medicine.org/biology-news-2/Washington-University-in-St--Louis---Monsanto-Co---awarded-crop-protection-patent- 3939-1/ Monsanto supports UW plant breeding with $1 million fellowship gift (http://www.news.wisc.edu/15628)http://www.news.wisc.edu/15628 North Dakota State University and Monsanto Announce Crop Research Collaboration (http://www.ext.nodak.edu/extnews/newsrelease/2006/072706/07northd.htm)http://www.ext.nodak.edu/extnews/newsrelease/2006/072706/07northd.htm

26. Research at public institutions should be released to the public, but release of information before a patent is applied for can invalidate a patent application.

27. A bigger issue can be what happens to researchers discoveries after publication.

28. What areas of research are not ethical?

29. Studying how to manipulate human emotions or desires?

30. What areas of research are not ethical? Studying how to manipulate human emotions or desires? -members of the American Psychological Association are forbidden to take part in interrogations involving “torture”

31. What areas of research are not ethical? Studying how to manipulate human emotions or desires? Weapons of mass destruction or biological weapons?

32. What areas of research are not ethical? Studying how to manipulate human emotions or desires? Weapons of mass destruction or biological weapons? Genetic modifications of people?

33. What areas of research are not ethical? Studying how to manipulate human emotions or desires? Weapons of mass destruction or biological weapons? Genetic modifications of people? …

34. Today: Authorship and Conflicts of Interest Homework 2 due in class on M 10/11 or T 10/12 Homework 4 due in lab on Th 9/30 or M 10/4