1. At the end of the electron transport chain, oxygen receives the energy-spent electrons, resulting in the production of water. ½ O 2 + 2 e- + 2 H+ → H 2 O Oxygen is the final electron acceptor. Almost immediately oxidized into H 2 O

2. How is this coupling accomplished? was originally thought that ATP generation was somehow directly done at Complexes I, III and IV. We now know that the coupling is indirect in that a proton gradient is generated across the inner mitochondrial membrane which drives ATP synthesis.

3. Mitochondrial respiratory chain: Complex I: - Transfers e - from NADH to quinone pool & pumps H +. Complex II: - Transfers e - from succinate to quinone pool & H + released. Complex III: - Transfers e - from quinol to cytochrome c & pumps H +. Complex IV: - Accepts e - from cytochrome c, reduces O 2 to H 2 O & pumps H +. Complex V: - Harvests H + gradient & regenerates ATP.

4. A total of 10 -12 H + are ejected from the mitochondrial matrix per 2 e  transferred from NADH to oxygen via the respiratory chain. Spontaneous electron flow through each of complexes I, III, & IV is coupled to H + ejection from the matrix. 4

5. Complex I (NADH Dehydrogenase) transports 4H + out of the mitochondrial matrix per 2e  transferred from NADH to CoQ. 4

6. Complex III (bc 1 complex): H + transport in complex III involves coenzyme Q (CoQ). 4

9. A very strong electrochemical gradient is established with few H+ in the matrix and many in the intermembrane space. The cristae also contain an ATP synthase complex through which hydrogen ions flow down their gradient from the intermembrane space into the matrix. The flow of three H+ through an ATP synthase complex causes a conformational change, which causes the ATP synthase to synthesize ATP from ADP + P.

10. High [H + ] Low [H + ] - - - + + + + + + _ _ + + + ++ Matrix Inner Membrane H+H+ H+H+ H+H+ Outer Membrane Intermembrane Space Cytoplasm + + + + + + + + + + + + H+H+ High [H + ] H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ - - - - - - Cristae Generation of a pH gradient ([H+]) and charge difference (negative in the matrix) across the inner membrane constitute the protonmotive force that can be used to drive ATP synthesis and transport processes.

11. Mitochondria produce ATP by chemiosmosis, so called because ATP production is tied to an electrochemical gradient, namely an H+ gradient. Once formed, ATP molecules are transported out of the mitochondrial matrix.

12. Chemiosmotic Theory --Peter Mitchell A proton gradient is generated with energy from electron transport by proton pumping by Complexes I,III, IV from the matrix to intermembrane space of the mitochondrion.

13. Proton-motive force The protons have a thermodynamic tendency to return to the matrix = Proton-motive force The protons diffuse back into the matrix through the F o F 1 ATP synthase complex. The free energy release drives ATP synthesis.

15. The proton pumps are Complexes I, III and IV. Protons return thru ATP synthase

17. The Domains Hydrophobic F 0 domain sits in the membrane - performs proton translocation Hydrophillic F 1 portion protrudes from membrane - performs ATP synthesis/hydrolysis 3 alternating alpha and beta subunits http://nobelprize.org/chemistry/laure ates/1997/illpres/boyer-walker.html

19. ATP synthase: a rotating molecular motor. a, b, , , and  subunits constitute the stator of the motor, and the c, , and  subunits form the rotor. Flow of protons through the structure turns the rotor and drives the cycle of conformational changes in  and  that synthesize ATP. http://www.bioc.aecom.yu.edu/labs/girvlab/ATPase/ATPsynthase.mov

20. Animations http://www.stolaf.edu/people/giannini/flashanimat/metabolism/atps yn1.swf Protons cross membrane through the ATP synthase enzyme http://www.stolaf.edu/people/giannini/flashanimat/metabolism/atps yn2.swf Rotary motion of ATP synthase powers the synthesis of ATP

21. The “stalk” rotates in 120°increments causes the units in the F 1 domain to contract and expand The structural changes facilitate the binding of ADP and P i to make ATP Each subunit goes through 3 stages Open State – releases any ATP Loose State – ADP and P i molecules enter the subunit Tight State – the subunit contracts to bind molecules and make ATP

22. ATP synthesis at F 1 results from repetitive conformational changes as  rotates  rotates 1/3 turn- energy for ATP release

30. Interesting Facts Contains 22722 atoms 23211 bonds connected as 2987 amino acid groups 120 helix units and 94 sheet units Generates over 100 kg of ATP daily (in humans) One of the oldest enzymes-appeared earlier then photosynthetic or respiratory enzymes Smallest rotary machine known

31. Uncoupling. The compound 2,4 dinitrophenol (DNP) allows H + through the membrane and uncouples. Blocking. The antibiotic oligomycin blocks the flow of H + through the F o, directly inhibiting ox-phos.

32. Regulation of Respiration -> Primarily by Need for ATP ATPase inhibited by: Oligomycin and Dicyclohexylcarbodiimi de (DCCD)

33. Chemiosmosis Production of ATP in Electron Transport H+ (Protons) generated from NADH Electrochemical Gradient Formed between membranes Electrical Force (+) & pH Force (Acid) thus gradient formed ATPase enzyme that channels H+ from High to Low concentration 3 ATP/NADH 2 ATP/NADH

37. Overall reaction using NADH funnel NADH + H + + 3ADP + 3P i + ½O 2  NAD + + 4H 2 O + 3ATP For the flavoprotein-CoQ funnel, Measure only about 2 ATP produced for each FADH 2 Quantify P/O ratio Definition: # Pi taken up in phosphorylating ADP per atom oxygen (½O 2 ) per 2e-. NADH 3 FADH2 2

38. What about energy and ATP stoichiometry? -- measured -- 220 kJ/mole from NADH oxidation -- ATP produced: ADP + P i  ATP  G°= +30.5 kJ/mole -- measure and find about 3 ATP produced for each NADH, which enters. (a little less) [3×(30.5)/220]×100 = 41% efficiency

39. Shuttling ATP, ADP and P i ATP is required in the cytosol ADP  IN OUT  ATP OUT  ATP(Exchange) So for every ATP transported to cytosol, an ADP must be transported into matrix

41. Mitochondrial transporters

42. 3 similar 100-residue units (A,B,C) 6 membrane-spanning segments

46. Adding Up the ATP from Cellular Respiration Figure 6.14 Cytosol Mitochondrion Glycolysis Glucose 2 Pyruvic acid 2 Acetyl- CoA Krebs Cycle Electron Transport by direct synthesis by direct synthesis by ATP synthase Maximum per glucose:

47. Figure 6.13 Food Polysaccharides FatsProteins SugarsGlycerolFatty acidsAmino acids Amino groups Glycolysis Acetyl- CoA Krebs Cycle Electron Transport