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Achieving 3-D Literacy Tia Johnson Beloit College.

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Presentation on theme: "Achieving 3-D Literacy Tia Johnson Beloit College."— Presentation transcript:

1 Achieving 3-D Literacy Tia Johnson Beloit College

2 Tools for Teaching  Hardware  Software  Accessories

3 Molecular Modeling and Visualization Software  Cn3D, NCBI Cn3D, NCBI Cn3D, NCBI  Mage/Kinemage, Duke Mage/Kinemage, Duke Mage/Kinemage, Duke  SwissPDB Viewer (DeepView) SwissPDB Viewer (DeepView) SwissPDB Viewer (DeepView)  WebMol, UC San Francisco WebMol, UC San Francisco WebMol, UC San Francisco  Chime, MDL Information Systems Chime, MDL Information Systems Chime, MDL Information Systems  Protein Explorer and RasMol (RasTop, GeneInfinity), U. Mass. Protein Explorer RasMolRasTop, GeneInfinity Protein Explorer RasMolRasTop, GeneInfinity

4 Accessories  Traditional models  Center for BioMolecular Modeling Center for BioMolecular Modeling Center for BioMolecular Modeling  MSOE Lending Library MSOE Lending Library MSOE Lending Library

5 TRP Cage  20-residue protein  Truncated from exendin-4  Protein Data Bank Protein Data Bank Protein Data Bank  TRP Cage Problem Space TRP Cage Problem Space TRP Cage Problem Space

6 Reports have shown students feel they have a better understanding of molecular structure, chemical properties and interactions, and gene-protein relationship after using molecular visualization software in their classes.


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