1. Survey Methodology Survey data entry/cleaning EPID 626 Lecture 10

2. To do or not to do: Contracting the work During study planning, you should decide whether to do the data entry, management, and analysis yourself, or whether to contract with someone else to do it What are the advantages and disadvantages? When might you want to? When might you not want to?

3. Contracting Advantages –Specialized expertise –Potential ability to access national network of personnel –Reduction of load on study personnel –Third party (without financial or professional stake in results) increases legitimacy of the results

4. Contracting Disadvantages –Generally more expensive Is this true? Discuss profits vs. expertise and efficiency –Lose direct control over quality of data and study conduct –May be more difficult to interpret data without having done the analysis

5. DIY: Now what? Data analysis plan Data entry Data diagnostics Data cleaning Data setup

6. Data analysis plan (DAP) Design from the protocol and the survey instrument –Note: they may be discrepant Aim: –Resolve discrepancies before you start working with the data –Establish a clear plan for data management and analysis

7. DAP elements Summarize methods For each survey objective, identify and describe the relevant variables Identify the analysis methods –Software –Statistical methods, tests, significance levels, definitions

8. DAP elements (2) Describe plan for handling: –missing values –out-of-range values –zeros if doing log transformations –data collapsing Describe subgroup or by-group analyses

9. DAP elements (3) Set up dummy tables and graphs Review this DAP carefully and pass it around

10. Data entry Design a database that resembles the survey instrument in layout and format Pretest it extensively Designer should be present at the beginning of data entry to fix bugs Double data entry? Avoid necessity of interpretation by entry personnel

11. You and Your Data Your first eight hours together

12. First things first Virus-check the files Write protect original data Back up files and CRFs –On-site: hard drives, diskettes, safes –Off-site: safe deposit box

13. First things first (2) Import data –Error prone; be very careful here Validate and verify the data

14. Validating and verifying data Run frequencies for categorical variables Run univariate statistics for continuous variables Examine key variables (those used in the evaluation of primary objectives) Look at variables by group (sex, age, etc)

15. Validating and verifying data (2) Recode missing values Calculate checks for error prone variables –Ex. Check dates against time-to variables –Check anything that the interviewer had to calculate, such as a total score Derive any key variables that need to be calculated from other variables, and verify them too

16. Validating and verifying data (3) Rearrange, combine, or separate datasets as needed for analysis –Ex. Split demographic data, primary outcome, secondary outcome data Annotate a survey instrument with variable names Create a data dictionary –Include variable name, type, length, and description or label

17. Validating and verifying data (4) Look for obvious errors –Ex. Spelling of medication or medical condition –Be very careful about correcting them –Document any changes –Think about a query system –May need interviewer to resolve errors

18. Validating and verifying data (5) Run rough crosstabs for reference –Ex. Number by sex, group, and age –Use to track observations Create data listings –Very useful for reference and to identify problems in the data Check data coming from different sources –Be very careful with merging

19. Validating and verifying data (6) Aside: Variable naming –Should be meaningful and descriptive –But be careful about overly descriptive names Long variable names are difficult to manipulate If meaning appears obvious, people won’t look it up Back all of this up in the same way you backed up the original data