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Teaching molecular structure using Jmol Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National.

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Presentation on theme: "Teaching molecular structure using Jmol Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National."— Presentation transcript:

1 Teaching molecular structure using Jmol Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National Meeting Washington, DC

2 The Jmol Project Jmol molecular visualization project Open-source Jmol.sourceforge.net Active user/developer community about 400 “users” about 150 “developers” collectively 23,000 list messages

3 The Jmol Community Professional graphics designers Professional developers Professors, graduate students, undergraduates

4 The Jmol Community Generally one of three focal points: –Research –Publishing –Education

5 The Jmol Community Generally one of three focal points: –Research Computational chemistry visualization Structural biology Electron microscopy/X-ray crystallography –Publishing –Education

6 JR Schmidt, U. Wisconsin “WebMO” http://www.webmo.net/

7 Peter Rose, RCSB http://www.rcsb.org/pdb/explore/jmol.do?structureId=1LDN

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9 Patrick Carroll, U. Penn. http://macxray.chem.upenn.edu/

10 The Jmol Community Generally one of three focal points: –Research –Publishing Interactive website content Professional graphics design Database front ends –Education

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12 Frieda Reichsman, http://pubs.acs.org/doi/media/10.1021/cb600303y/figure2.htm

13 Tim Driscoll MolVis http://molvis.sdsc.edu/fgij/fg.htm?mol=1ldn

14 Alan Hewat, http://icsd.fiz-karlsruhe.de/icsd/

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16 The Jmol Community Generally one of three focal points: –Research –Publishing –Education High School General chemistry Organic chemistry Biochemistry Inorganic chemistry Computational chemistry

17 The Molecular Workbench

18 Charles Xie, Concord Consortium http://mw.concord.org/modeler/

19 Molecular Symmetry Dean Johnston, Otterbein College, http://symmetry.otterbein.edu/

20 Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm

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24 CoolMolecules Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm Mike McGuan Melanie Casavant

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