1. Axonal morphometry n Maxsim n NeuronTracer n Divers Real axons (& dendrites) Parameters & Properties (Numerical values)

2. Activities 99 Q1-2

3. Maxsim (93 - 98) n Imports 2-d or 3-d data from NeuroLucida n Displays and quantifies markers & trees n (will) Import data from hand-drawings n Exports results to Excel

4. Maxsim n Imports 2-d or 3-d data from NeuroLucida n Displays and quantifies markers & trees n (will) Import data from hand-drawings n Exports results to Excel

5. 3-d 2-d

6. Maxsim n Imports 2-d or 3-d data from NeuroLucida n Displays and quantifies markers & trees n (will) Import data from hand-drawings n Exports results to Excel

8. Maxsim n Imports 2-d or 3-d data from NeuroLucida n Displays and quantifies markers & trees n (will) Import data from hand-drawings n Exports results to Excel

10. Maxsim n Imports 2-d or 3-d data from NeuroLucida n Displays and quantifies markers & trees n (will) Import data from hand-drawings n Exports results to Excel

11. Adds-on to Maxsim n Depth analysis & 2-d densities of cells n Cortical flattening

12. Adds-on to Maxsim n Depth analysis & 2-d densities of cells n Cortical flattening

13. Depth of cells 2-d density

14. Adds-on to Maxsim n Depth analysis & 2-d densities of cells n Cortical flattening

16. NeuronTracer™ n Imports confocal stacks (TIFF & Imaris) n 3-d Browser and image processing n Segmentation -> “graph” n Graph cleaning (automatic & manual) n Morphometry & Statistics

17. NeuronTracer™ n Imports confocal stacks (TIFF & Imaris) n 3-d Browser and image processing n Vectorization -> “graph” n Graph cleaning (automatic & manual) n Morphometry & Statistics

19. NeuronTracer™ n Imports confocal stacks (TIFF & Imaris) n 3-d Browser and image processing n Segmentation -> “graph” n Graph cleaning (automatic & manual) n Morphometry & Statistics

20. Conclusion Maxsim : available at IBCM On SGI: “ maxsim ” Maxsim : available at IBCM On SGI: “ maxsim ” n NeuronTracer : in development User interaction would be appreciated n Other : service & advice on request